Exploring the dynamics of Zr-based metal-organic frameworks containing mechanically interlocked molecular shuttles.

Zr(iv) metal-organic frameworks (MOFs) UiO-68 and PCN-57, containing triphenylene dicarboxylate (TPDC) and tetramethyl-triphenylene dicarboxylate (TTDC) linkers, respectively, were doped with an H-shaped tetracarboxylate linker that contains a [2]rotaxane molecular shuttle. The new MOFs, UWDM-8 and UWDM-9, contain a [2]rotaxane crossbar spanning the tetrahedral cavities of the fcu topology while the octahedral cavities remain empty. 13C solid-state NMR (SSNMR) spectra and solution 1H NMR spectra verified that the [2]rotaxanes were included as designed. Variable-temperature (VT) cross polarization (CP) magic-angle spinning (MAS) 13C SSNMR was used to explore the translational motion of the macrocyclic ring in both MOFs. The SSNMR results clearly show that the structure of the linker (TPDCvs.TTDC) affects the shuttling rate of the macrocyclic ring, although questions remain as to how rotation of the central phenylene unit of the strut might also affect the motion of the macrocycle.

One-pot synthesis of porphyrin-based [5]rotaxanes.

A one-pot reaction is used to make a series of [5]rotaxanes. The protocol involves simultaneous threading-followed-by-stoppering to trap a macrocycle (dibenzo[24]crown-8, DB24C8) on an axle to form a mechanically interlocked molecule (MIM) - in this case a rotaxane - and the condensation of an aldehyde with a pyrrole to form a porphyrin precursor. For each [5]rotaxane, a different combination of recognition site and stoppering group was used; the protonation state of the [5]rotaxane can be used to generate different co-conformational states for each [5]rotaxane making these systems potential multi-state switches for further study in solution or the solid-state.

Metal ions in the synthesis of interlocked molecules and materials.

The use of metal ions to template the synthesis of catenanes by Sauvage and co-workers was a pivotal moment in the development of the field of interlocked molecules. In this Review Article we shall examine the different roles metal-ligand interactions play in modern syntheses of interlocked molecules and materials, with a particular focus on seminal contributions and the advantages and disadvantages of employing metal ligand interactions.

A pyridinium/anilinium [2]catenane that operates as an acid-base driven optical switch.

A two-station [2]catenane containing a large macrocycle with two different recognition sites, one bis(pyridinium)ethane and one benzylanilinium, as well as a smaller DB24C8 ring was synthesized and characterized. 1H NMR spectroscopy showed that the DB24C8 ring can shuttle between the two recognition sites depending on the protonation state of the larger macrocycle. When the aniline group is neutral, the DB24C8 ring resides solely at the bis(pyridinium)ethane site, while addition of acid forms a charged benzylanilinium site. The DB24C8 then shuttles between the two charged recognition sites with occupancy favoring the bis(pyridinium)ethane site by a ratio of 4:1. The unprotonated [2]catenane has a deep yellow/orange color when the DB24C8 ring resides solely at the bis(pyridinium)ethane site and changes to colorless when the crown ether is shuttling (i.e., circumrotating) back and forth between the two recognition sites thus optically signalling the onset of the shuttling dynamics.

Rotationally Active Ligands: Dialing-Up Multiple Interlocked Co-Conformations for Silver(I) Coordination.

A novel [2]rotaxane ligand has been prepared that contains a bidentate N,N'-chelate as part of a rigid, H-shaped axle and a 24-membered crown ether macrocycle containing six ether O-atoms and a trans olefinic group as the wheel. This unique interlocked connectivity allows access to a number of different donor sets, which are shown to be capable of binding AgI metal ions.

Optical Distinction between "Slow" and "Fast" Translational Motion in Degenerate Molecular Shuttles.

A series of six [2]rotaxane molecular shuttles was designed which contain an axle with a benzo-bis(imidazole) core (in either a neutral or dicationic form) and a single 24-membered, crown ether wheel (24C6, B24C6, or DMB24C6), and the shuttling rates of the ring along the axle were determined. The charged versions showed much slower shuttling rates as a result of the increase in noncovalent interactions between the axle and wheel. The [2]rotaxane with a B24C6 wheel shows a difference in fluorescence between the charged and neutral species, while the [2]rotaxane with a DMB24C6 wheel exhibits a difference in color between the charged and neutral compounds. These changes in optical properties can be attributed to the structural differences in the co-conformations of the [2]rotaxane as they adapt to the changes in acid/base chemistry. This allowed the relative rate of the translational motion of a molecular shuttle to be determined by observation of a simple optical probe.

From Binuclear Complexes to Molecular Necklaces: Incorporating Flexible Ligands into Rotaxanes.

The conversion of binuclear complexes into larger molecular necklaces can be achieved through rigidifying flexible ligands by threading them through a crown ether to form either an interpenetrated [2]pseudorotaxane or a permanently interlocked [2]rotaxane. The resulting complexes and assemblies are characterized by (1) H and DOSY NMR in solution and single-crystal X-ray diffraction in the solid-state.

Rigid, Bistable Molecular Shuttles Combining T-shaped Benzimidazolium and Y-shaped Imidazolium Recognition Sites.

Two different recognition sites, one a T-shaped 2,4,7-triphenylbenzimidazolium and the other a Y-shaped 2,4,5-triphenylimidazolium are combined to construct a rigid bistable [2]rotaxane molecular shuttle on which the position of a 24-membered crown ether macrocycle can be controlled by acid-base chemistry. Molecular shuttling in both the neutral and dicationic versions were studied.

Rotationally Active Ligands: Dialing-Up the Co-conformations of a [2]Rotaxane for Metal Ion Binding.

A novel [2]rotaxane was constructed that has a bidentate N,N'-chelate as part of a rigid, H-shaped axle and a 24-membered crown ether macrocycle containing six ether O-atoms and an olefinic group as the wheel. This unique topology produces a ligand with the ability to dial-up different donor sets for complexation to metal ions by simply rotating the wheel about the axle. The solution and solid-state structures of the free ligand and complexes with Li(+) and Cu(+) show how the ligand adopts different rotational co-conformations for each. The Li(+) ion uses the N,N'-chelate and O-donors while the Cu(+) center is coordinated to both O-donors and the olefinic group. This concept of rotationally active ligands should be possible with a wide variety of donor sets and could find broad application in areas of coordination chemistry, such as catalysis and metal sequestration.

Mechanically Interlocked Linkers inside Metal-Organic Frameworks: Effect of Ring Size on Rotational Dynamics.

A series of metal-organic framework (MOF) materials has been prepared, each containing a mechanically interlocked molecule (MIM) as the linker and a copper(II) paddlewheel as the secondary building unit (SBU). The MIM linkers are [2]rotaxanes with varying sizes of crown ether macrocycles ([22]crown-6, 22C6; [24]crown-6, 24C6; [26]crown-6, 26C6; benzo[24]crown-6, B24C6) and an anilinium-based axle containing four carboxylate donor groups. Herein, the X-ray structures of MOFs UWCM-1 (no crown) and UWDM-1(22) are compared and demonstrate the effect of including a macrocycle around the axle of the linker. The rotaxane linkers are linear and result in nbo-type MOFs with void space that allows for motion of the interlocked macrocycle inside the MOF pores, while the macrocycle-free linker is bent and yields a MOF with a novel 12-connected bcc structure. Variable temperature (2)H solid-state nuclear magnetic resonance showed that the macrocycles in UWDM-1(22), UWDM-1(24), and UWDM-1(B24) undergo different degrees and rates of rotation depending on the size and shape of the macrocycle.

Metal-organic frameworks with mechanically interlocked pillars: controlling ring dynamics in the solid-state via a reversible phase change.

Metal-organic framework (MOF) materials have been prepared that contain a mechanically interlocked molecule (MIM) as the pillaring strut between two periodic Zn-carboxylate layers. The MIM linker is a [2]rotaxane with a [24]crown-6 (24C6) macrocycle and an aniline-based axle with terminal pyridine donor groups. The single-crystal X-ray structures of MOFs UWDM-2 (1,4-diazophenyl-dicarboxylate) and UWDM-3 (1,4-biphenyl-dicarboxylate) show that both frameworks are large enough to contain the free volume required for rotation of the interlocked 24C6 macrocycle, but the frameworks are interpenetrated (UWDM-2, three-fold, and UWDM-3, two-fold). In particular, for UWDM-3 the 24C6 rings of the pillaring MIM are positioned directly inside the square openings of neighboring zinc dicarboxylate layers. Variable-temperature (VT) (2)H SSNMR demonstrated that the 24C6 macrocycles in UWDM-2 and UWDM-3 can only undergo restricted motions related to ring flexibility or partial rotation but are incapable of undergoing free rotation. VT-powder X-ray diffraction studies showed that upon activation of UWDM-3, by removing solvent, a phase change occurs. The new ß-phase of UWDM-3 retained crystallinity, and (2)H SSNMR demonstrated that the 24C6 macrocyclic ring of the pillared MIM strut is now free enough to undergo full rotation. Most importantly, the phase change is reversible; the ß version of the MOF can be reverted to the original α state by resolvation, thus demonstrating, for the first time, that the dynamics of a MIM inside a solid material can be controlled by a reversible phase change.

Organizing mechanically interlocked molecules to function inside metal-organic frameworks.

The idea that the workings of molecular switches, motors, and machines based on mechanically interlocked molecules can be transferred into the solid state by using them as the building blocks of metal-organic framework materials is addressed. This involves an in-depth review and analysis of the chemistry of coordination polymers and metal-organic frameworks in which the linkers are rotaxanes and catenanes. To date, two types of materials have been prepared: (1) coordination polymers in which the interlocked components are part of a complex architecture but do not display large amplitude molecular motion or function and (2) those that clearly demonstrate some type of supramolecular quality (molecular recognition) or relative motion between interlocked components (dynamics) reminiscent of their solution counterparts. The latter can be thought of as prototypes of solid-state molecular machines. The possibility of creating more sophisticated, solid-state materials that have the full characteristics of molecular switches, motors, and machines and the way forward for this chemistry is also discussed.

[2]Pseudorotaxane formation between rigid Y-shaped 2,4,5-triphenylimidazolium axles and [24]crown-8 ether wheels.

A new templating motif for the formation of [2]pseudorotaxanes is described in which rigid, Y-shaped axles with an imidazolium core and aromatic substituents at the 2-, 4- and 5-positions interact with [24]crown-8 ether wheels ([24]crown-8 and dibenzo[24]crown-8). The Y-shape of the axle significantly enhances the association between axle and wheel when compared to simple imidazolium cations.

Platinum-based metal complexes as chloride transporters that trigger apoptosis.

In this paper we demonstrate that Pt(ii) complexes can function as efficient transmembrane chloride transporters. A series of Pt(ii) metal complexes with urea-appended isoquinoline ligands were synthesised and operate via classical hydrogen bonding interactions rather than ligand exchange. A number of the complexes exhibited potent transmembrane chloride activity in vesicle studies, while also showing strong antiproliferative activity in cisplatin-resistant cell lines via induction of apoptosis and inhibition of intracellular ROS.

Mesomorphic [2]rotaxanes: sheltering ionic cores with interlocking components.

Two types of liquid crystalline [2]rotaxanes based on a conventional tetracatenar motif (a rod-shaped molecule with two side chains at each end) have been prepared. Dicationic compounds with ester stoppers and tetracationic materials with pyridinium stoppers are compared to each other and their dumbbell shaped analogs. Since the ionic core contributes about 70% to the overall length and molecular weight of the molecules, sheltering the ionic cores with an interlocked neutral macrocycle has considerable effect on the mesomorphism and thermal stability of the materials. The influence of the sheltering macrocycle, the numbers of charges on the core and the size and nature of the side chains (aliphatic vs siloxane) were probed. [2]Rotaxanes with linear side chains and minimum ratios of chain-to-core volumes of about 0.35 and 0.30 for tetra- and dicationic compounds, respectively, display smectic liquid crystal phases. Larger ratios increase the temperature range of the smectic A phases beyond the decomposition temperatures; a disadvantage for processing because no stable isotropic liquid phase is available. The change from tetra- to dicationic [2]rotaxanes increased not only the fluidity of their smectic A phases but also their thermal and chemical stability. Branched side chains (2-hexyldecyl) disfavor the formation of lamellar mesophases and, instead, induce higher ordered soft crystal phases. No liquid crystal phases but soft crystal phases are observed for the analogous di- and tetracationic compounds without an ion sheltering interlocked macrocycle (dumbbells).

An interwoven metal-organic framework combining mechanically interlocked linkers and interpenetrated networks.

New dibenzo[24]crown-8 ether derivatives were prepared that contain appendages with thioether donors that can coordinate to a metal ion. These macrocycles were then combined with 1,2-bis(pyridinium) ethane axles to create two types of [2]rotaxane ligands; those with the four thioether donors on the crown ether and those with six donor groups, four from the crown ether and two more attached to the stoppering groups of the dumbbell. The crown ethers and both types of [2]rotaxane ligands were allowed to react with Ag(I) ions to form metal-organic rotaxane framework (MORF) style coordination polymers. The interlocked hexadentate ligand forms the first example of a new type of lattice containing interwoven frameworks resulting from both interpenetration of frameworks due to the presence of an interlocked ligand and more classical interpenetration of independent frameworks.

Coordination polymers containing rotaxane linkers.

A class of coordination polymers in which the linking ligands are mechanically interlocked rotaxane molecules is reviewed. To date, four different, axle - wheel templating motifs have been used to create the [2]pseudorotaxane linkers for these unique solid-state materials; (1) protonated diaminoalkane axles with cucurbit[6]uril wheels, (2) 1,2-bis(4,4'-bipyridinio)ethane axles with dibenzo[24]crown-8 wheels, (3) 2,6-naphthalene dicarboxylate axles with tetra-imidazolium macrocycle wheels and (4) a Cu(I) complex of a 1,10-phenanthroline containing dicarboxylate axle with a 1,10-phenanthroline containing crown ether wheel. The synthesis and solid state structure of each coordination polymer is described. The future directions of this area of research and some designs for the next generation of these compounds are discussed.

A translationally active ligand based on a [2]rotaxane molecular shuttle with a 2,2'-bipyridyl core.

A rigid H-shaped, [2]rotaxane molecular shuttle comprised of an axle containing two benzimidazole recognition sites and a central 2,2'-bipyridyl (bipy) group interlocked with a 24-crown-8 (24C8) wheel was synthesized using a threading followed by stoppering protocol. The central bipy chelating unit was shown to act as a speed bump that raised the barrier to shuttling for the [2]rotaxane. Coordination of a PtCl2 moiety to the bipy unit in a square planar geometry created an insurmountable steric barrier to shuttling. Addition of one equivalent of NaB(3,5-(CF3)2C6H3)4 removed one of the chloride ligands allowing for translation of the crown ether along the axle into the coordination sphere of the Pt(ii) centre but full shuttling of the crown ether could not be activated. In contrast, addition of Zn(ii) ions in a coordinating solvent (DMF) allowed shuttling to occur using a ligand exchange mechanism. DFT calculations showed this likely occurs via coordination of the 24C8 macrocycle to the Zn(ii) centre bound to the bipy chelate. This interplay of the rotaxane axle and wheel components is an example of a translationally active ligand that utilises the large amplitude displacement of a macrocycle along an axle in a molecular shuttle to access ligand coordination modes not possible with conventional ligand designs.

[2]Pseudorotaxanes, [2]rotaxanes and metal-organic rotaxane frameworks containing tetra-substituted dibenzo[24]crown-8 wheels.

[2]Pseudorotaxanes, [2]rotaxanes and metal-organic rotaxane framework materials that utilise DB24C8 as the wheel component are well known and structural variations based on changing the axle component are common. Studies in which the DB24C8 wheel is structurally modified are much more limited. Herein, is described the synthesis of symmetrical DB24C8 analogues containing four CH(2)OR (R = CH(2)CH(2)CH(3), CH(2)(C(6)H(5)), C(6)H(5) and C(6)H(4)(4-COOEt)) substituents on the 4 and 5 positions of the aromatic rings. The effect of these molecular appendages on the stability and structures of the interpenetrated and interlocked molecules derived from these new wheels is described. The major effects are an increase in association constants for the formation of [2]pseudorotaxanes relative to DB24C8, the crystal packing of [2]rotaxanes and a change on the internal structure of a 2D MORF (R = C(6)H(5)) compared to DB24C8.

Structural Dynamics by NMR in the Solid State: II. The MOMD Perspective of the Dynamic Structure of Metal-Organic Frameworks Comprising Several Mobile Components.

We describe the application of the microscopic-order-macroscopic-disorder (MOMD) approach, developed for the analysis of dynamic 2H NMR lineshapes in the solid state, to unravel interactions among the constituents of metal-organic frameworks (MOFs) that comprise mobile components. MOMD was applied recently to University of Windsor Dynamic Material (UWDM) MOFs with one mobile crown ether per cavity. In this work, we study UWDM-9-d4, which comprises a mobile 2H-labeled phenyl-ring residue along with an isotopically unlabeled 24C8 crown ether. We also study UiO-68-d4, which is structurally similar to UWDM-9-d4 but lacks the crown ether. The physical picture consists of the NMR probe─the C-D bonds of the phenyl-d4 rotor─diffusing locally (diffusion tensor R) in the presence of a local ordering potential, u. For UiO-68-d4, we find it sufficient to expand u in terms of four real Wigner functions, D0|K|L, overall 2-3 kT in magnitude, with R∥ relatively fast, and R⊥ in the (2.8-5.0) × 102 s-1 range. For UWDM-9-d4, u requires only two terms 2-3 kT in magnitude and slower rate constants R∥ and R⊥. In the more crowded macrocycle-containing UWDM-9-d4 cavity, phenyl-d4 dynamics is more isotropic and is described by a simpler ordering potential. This is ascribed to cooperative phenyl-ring/macrocycle motion, which yields a dynamic structure more uniform in character. The experimental 2H spectra used here were analyzed previously with a multi-simple-mode (MSM) approach where several independent simple motional modes are combined. Where possible, similar features have been identified and used to compare the two approaches.