Chromosome-level genome provides insight into the evolution and conservation of the threatened goral (Naemorhedus goral).

BACKGROUND: Gorals Naemorhedus resemble both goats and antelopes, which prompts much debate about the intragenus species delimitation and phylogenetic status of the genus Naemorhedus within the subfamily Caprinae. Their evolution is believed to be linked to the uplift of the Qinghai-Tibet Plateau (QTP). To better understand its phylogenetics, the genetic information is worth being resolved. RESULTS: Based on a sample from the eastern margin of QTP, we constructed the first reference genome for Himalayan goral Naemorhedus goral, using PacBio long-read sequencing and Hi-C technology. The 2.59 Gb assembled genome had a contig N50 of 3.70 Mb and scaffold N50 of 106.66 Mb, which anchored onto 28 pseudo chromosomes. A total of 20,145 protein-coding genes were predicted in the assembled genome, of which 99.93% were functionally annotated. Phylogenetically, the goral was closely related to muskox on the mitochondrial genome level and nested into the takin-muskox clade on the genome tree, rather than other so-called goat-antelopes. The cladogenetic event among muskox, takin and goral occurred sequentially during the late Miocene (~ 11 - 5 Mya), when the QTP experienced a third dramatic uplift with consequent profound changes in climate and environment. Several chromosome fusions and translocations were observed between goral and takin/muskox. The expanded gene families in the goral genome were mainly related to the metabolism of drugs and diseases, so as the positive selected genes. The Ne of goral continued to decrease since ~ 1 Mya during the Pleistocene with active glaciations. CONCLUSION: The high-quality goral genome provides insights into the evolution and valuable information for the conservation of this threatened group.

Spondyloarthritis in Taihangshan Macaques (Macaca mulatta tcheliensis).

The rhesus macaque (Macaca mulatta) is the most widely distributed nonhuman primate species, and captive populations play an important role in biomedical research due to close phylogenetic and physiological similarity to human beings. However, to our best knowledge, the spondyloarthritis (SpA) in rhesus macaques has been exclusively reported in captive or semicaptive populations rather than wild counterparts. In the present study, we report 2 cases of SpA observed in Taihangshan macaques (Macaca mulatta tcheliensis) inhabiting the Taihangshan Macaque National Nature Reserve, Henan Province, China. Among these 2 cases, one can be diagnosed as ankylosing spondylitis (AS) following accepted medical criteria, and another case showed evident fusion at the pubic symphysis which could be specific to rhesus macaque AS. We discuss the potential causes leading directly or indirectly to the development of SpA.

Reproductive parameters of female Macaca mulatta tcheliensis in the temperate forest of Mount Taihangshan, Jiyuan, China.

The remaining population of Macaca mulatta tcheliensis, approximately 3,000 individuals, is currently confined to the southern region of Mount Taihangshan, northern China. Using data collected from February 2003 to November 2012, we examined female reproductive characteristics in a seasonally food supplemented free-ranging group of M. m. tcheliensis (Wangwu 1, WW-1), inhabiting the Taishangshan Macaque National Nature Reserve (TMNNR), Jiyuan, China. We tested a series of predictions regarding the degree to which M. m. tcheliensis is best considered as a "strict income breeder," a "relaxed income breeder" or a "capital breeder." This group was comprised 18 adult females who produced 64 infants over the 10-year study period. In our study group (WW-1) adult female macaques gave birth to an average of 0.71 ± 0.26 infants per year. Infant mortality was 13.4 ± 19.3%. The age at first birth for mothers was 4.9 ± 0.5 years old. The mean inter-birth interval (IBI) was 15.4 ± 4.9 months. Based on the fact M. m. tcheliensis is a strictly seasonal breeder (76.6% of births occurred between April and May) with infants born during a time of the year when food availability appears to be high, and that their IBI is intermediate in length compared with other macaque populations, our results suggest that M. m. tcheliensis follows a birth pattern most consistent with a "relaxed income breeder" strategy.

Ultramorphological Comparison of Proboscis and Associated Sensilla of Scotogramma trifolii and Protoschinia scutosa (Lepidoptera: Noctuidae).

The proboscis is an important feeding organ for the glossatan moths, mainly adapted to the flower and non-flower visiting habits. The clover cutworm, Scotogramma trifolii Rottemberg, and the spotted clover moth, Protoschinia scutosa (Denis & Schiffermuller), are serious polyphagous pests, attacking numerous vegetables and crops, resulting in huge economic losses. However, the feeding behavior and mechanisms of the adult stage remain unsatisfactorily explored. In this study, the proboscis morphology of S. trifolii and P. scutosa are described in detail using scanning electron microscopy, with the aim of investigating the morphological differences and feeding behavior of these two species. The proboscises of S. trifolii and P. scutosa are similar in morphology and structure and are divided into three zones (Zone 1-3) based on the morphological changes of the dorsal legulae. Three sensillum types are located on the proboscises of both species, sensilla chaetica, sensilla basiconica, and sensilla styloconica. Significant differences were observed in the length of the proboscis and each zone between these two species, as well as in sensilla size and number. Based on the morphology of the proboscis and associated sensilla, S. trifolii and P. scutosa are potential flower visitors, which was also reinforced by the pollen observed at the proboscis tip. These results will strengthen our understanding of the structure of the proboscis related to the feeding behavior of Noctuidae.

Sensilla of the antenna and proboscis of Athetis lepigone (Möschler) (Lepidoptera: Noctuidae).

Sensory structures on the antennae and mouthparts of insects are associated with various activities, such as host location, feeding, attracting a mate, and identifying a suitable oviposition site. Athetis lepigone (Möschler) is an important polyphagous Eurasian pest with more than 30 species of host plants. The larvae target bud leaves, prop roots, and tender stems of many agricultural crops, but the feeding habits of the adults remain poorly known. Aiming to understand the feeding behavior of the species, we investigated the fine morphology of its antennae and proboscis using scanning electron microscopy. The antennae of both sexes are filiform, and bear eight types of sensilla: Böhm's bristles, sensilla squamiformia, trichodea, chaetica, basiconica, coeloconica, styloconica, and auricillica. Sensilla trichodea are the most abundant among these sensillum types. The proboscis consists of two elongated, interlocked maxillary galeae that enclose the food canal by dorsal and ventral legulae. The external galeal surface is covered with numerous triangular microtrichia on Zone 1 and abundant blunt microbumps on Zone 2. The surface of the food canal bears closely connected and smooth semicircular ridges, gradually tapering toward the proboscis tip. Three types of sensilla are noticeable on the proboscis: sensilla trichodea, basiconica, and styloconica. We briefly discuss the putative functional significance of the antennal and proboscis sensilla and, based on the specific structural modifications of the proboscis, predict a flower-visiting habit for A. lepigone.

[Comparison of hemogram changes under chronic intermittent hypoxia in Lasiopodomys mandarinus and Kunming Mus musculus].

Mandarin vole (Lasiopodomys mandarinus) spends almost all of its life underground and must have evolved remarkable adaptations to cope with the subterranean hypoxic stress. The aim of present study is to explore the adaptation mechanism through the comparison of hemogram changes under chronic intermittent hypoxia in Mandarin vole and Kunming (KM) mouse (Mus musculus). Mandarin vole and KM mouse were treated with chronic intermittent hypoxia (10.0% oxygen), which was maintained by an oxygen cabin, for 4 h per day during four weeks. Then blood samples from the animals with and without hypoxia treatment were analyzed by a hematology analyzer. The results showed that under normoxic condition mean corpuscular volume (MCV), mean corpuscular hemoglobin (MCH), white blood cell count (WBC) and platelet (PLT) in Mandarin vole were significantly lower than those in KM mouse. On the contrast, red blood cell count (RBC) and mean corpuscular hemoglobin concentration (MCHC) in Mandarin vole were higher than that in KM mouse. After four-week chronic intermittent hypoxia treatment, the hemogram changes were as following. MCV and HCT were elevated in Mandarin vole, not affected in KM mouse. Both hemoglobin (HGB) content and MCH in KM mouse increased, while only MCH increased in Mandarin vole. No obvious changes of WBC and PLT were found in two species. These results suggest that the adaptive mechanism of blood system in Mandarin vole responding to hypoxic conditions is different from that of KM mouse. As a subterranean vole, the Mandarin vole has a better tolerance to hypoxia.

Establishment of a microsatellite set for noninvasive paternity testing in free-ranging Macaca mulatta tcheliensis in Mount Taihangshan area, Jiyuan, China.

BACKGROUND: Within multi-male and multi-female mammalian societies, paternity assignment is crucial for evaluating male reproductive success, dominance hierarchy, and inbreeding avoidance. It is, however, difficult to determine paternity because of female promiscuity during reproduction. Noninvasive molecular techniques (e.g., fecal DNA) make it possible to match the genetic father to his offspring. In the current study, a troop of free-ranging Taihangshan macaques (Macaca mulatta tcheliensis) in Mt. Taihangshan area, Jiyuan, China, was selected for studying the paternity. We successfully screened a set of microsatellite loci from fecal DNA and evaluated the efficiency of these loci for paternity testing using clearly recorded data of maternity. RESULTS: The results showed that: 1) ten loci out of 18 candidate microsatellite loci were amplified successfully in the fecal samples of Taihangshan macaques. The error probability in maternity assignments and paternity testing was very low as indicated by their power of discrimination (0.70 to 0.95), power of exclusion (0.43 to 0.84), and the values of polymorphic information content ranging from 0.52 to 0.82; 2) the combined probability of exclusion in paternity testing for ten qualified loci was as high as 99.999%, and the combined probability of exclusion reached 99.99% when the seven most polymorphic loci were adopted; 3) the offspring were assigned to their biological mother correctly and also matched with their genetic father. CONCLUSIONS: We concluded that the ten polymorphic microsatellite loci, especially a core set of seven most polymorphic loci, provided an effective and reliable tool for noninvasive paternity testing in free-ranging rhesus macaques.

Comparison of food hoarding of two sympatric rodent species under interspecific competition.

Competition can greatly affect the food hoarding strategies of rodents and the fate of seeds hoarded. In order to understand the influence of interspecific competition on food caching behavior of sympatric rodents, we investigated food hoarding patterns of two sympatric rodent species, buff-breasted rat (Rattus flavipectus) and Chinese white-bellied rat (Niviventor confucianus), and compared their responses and adjustment in hoarding behavior under interspecific competition. The results showed that: (1) the buff-breasted rat larder hoarded seeds only, while Chinese white-bellied rat hoarded seeds in both larder and scatter forms; (2) two species of rodents both larder hoarded more seeds when competitors were present; and (3) the Chinese white-bellied rats adjusted their seed hoarding from scatter to larder when competitors were introduced, which reduced the seed availability. Therefore, we concluded that rodents would adjust their food hoarding strategy when interspecific competitors were present, and this may produce a different effect on the fate of seeds and the recruitment of plants. This article is part of a Special Issue entitled: insert SI title.

[Seasonal variations of wild apricot seed dispersal and hoarding by rodents in rehabilitated land].

Rodents feed with and disperse plant seeds, which may thereby affect the seed spatiotemporal distribution, germination, and seedling establishment, and eventually play an important role in the restoration of deforested area. Taking the State-owned Yugong Forest Farm in Jiyuan of Henan, China as study site, the tagged seeds of wild apricot (Prunus armeniaca) were artificially released in rehabilitated land in the spring, summer, and autumn 2008, aimed to investigate their dispersal and hoarding by rodents in different seasons. It was found that Apodemus peninsulae, Niviventer confucianus, and Apodemus agrarius were the main rodent species acting on the seed dispersal and hoarding. The dispersal rate of the seeds was significantly lower in spring than in summer, and also, lower in summer than in autumn. The amount of removed seeds was affected by the interaction of season and seed status, being significantly lesser in spring than in summer, and lesser in summer than in autumn. The mean transportation distance differed with seasons, which was longer in autumn than in spring and summer. The cache size in majority caches was 1 seed, but in a few caches, each cache contained 2 or 3 seeds. The cache number was affected by the interaction of season and seed status, i.e., one seed cache was lesser in spring than in summer and autumn, while the caches containing 2 or 3 seeds were more in summer and autumn. Among the 1800 seeds released, there were five seeds hoarded in summer and autumn respectively established seedlings in the next year of the experiment.