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1.
Plant J ; 119(5): 2514-2537, 2024 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-38970620

RESUMO

Soil salinity is a major environmental stressor affecting agricultural productivity worldwide. Understanding plant responses to salt stress is crucial for developing resilient crop varieties. Wild relatives of cultivated crops, such as wild tomato, Solanum pimpinellifolium, can serve as a useful resource to further expand the resilience potential of the cultivated germplasm, S. lycopersicum. In this study, we employed high-throughput phenotyping in the greenhouse and field conditions to explore salt stress responses of a S. pimpinellifolium diversity panel. Our study revealed extensive phenotypic variations in response to salt stress, with traits such as transpiration rate, shoot mass, and ion accumulation showing significant correlations with plant performance. We found that while transpiration was a key determinant of plant performance in the greenhouse, shoot mass strongly correlated with yield under field conditions. Conversely, ion accumulation was the least influential factor under greenhouse conditions. Through a Genome Wide Association Study, we identified candidate genes not previously associated with salt stress, highlighting the power of high-throughput phenotyping in uncovering novel aspects of plant stress responses. This study contributes to our understanding of salt stress tolerance in S. pimpinellifolium and lays the groundwork for further investigations into the genetic basis of these traits, ultimately informing breeding efforts for salinity tolerance in tomato and other crops.


Assuntos
Estudo de Associação Genômica Ampla , Fenótipo , Estresse Salino , Solanum , Solanum/genética , Solanum/fisiologia , Tolerância ao Sal/genética , Tolerância ao Sal/fisiologia
2.
Sensors (Basel) ; 20(11)2020 Jun 10.
Artigo em Inglês | MEDLINE | ID: mdl-32532127

RESUMO

Thermal infrared cameras provide unique information on surface temperature that can benefit a range of environmental, industrial and agricultural applications. However, the use of uncooled thermal cameras for field and unmanned aerial vehicle (UAV) based data collection is often hampered by vignette effects, sensor drift, ambient temperature influences and measurement bias. Here, we develop and apply an ambient temperature-dependent radiometric calibration function that is evaluated against three thermal infrared sensors (Apogee SI-11(Apogee Electronics, Santa Monica, CA, USA), FLIR A655sc (FLIR Systems, Wilsonville, OR, USA), TeAx 640 (TeAx Technology, Wilnsdorf, Germany)). Upon calibration, all systems demonstrated significant improvement in measured surface temperatures when compared against a temperature modulated black body target. The laboratory calibration process used a series of calibrated resistance temperature detectors to measure the temperature of a black body at different ambient temperatures to derive calibration equations for the thermal data acquired by the three sensors. As a point-collecting device, the Apogee sensor was corrected for sensor bias and ambient temperature influences. For the 2D thermal cameras, each pixel was calibrated independently, with results showing that measurement bias and vignette effects were greatly reduced for the FLIR A655sc (from a root mean squared error (RMSE) of 6.219 to 0.815 degrees Celsius (℃)) and TeAx 640 (from an RMSE of 3.438 to 1.013 ℃) cameras. This relatively straightforward approach for the radiometric calibration of infrared thermal sensors can enable more accurate surface temperature retrievals to support field and UAV-based data collection efforts.

3.
Sensors (Basel) ; 19(21)2019 Oct 29.
Artigo em Inglês | MEDLINE | ID: mdl-31671804

RESUMO

The use of unmanned aerial vehicles (UAVs) for Earth and environmental sensing has increased significantly in recent years. This is particularly true for multi- and hyperspectral sensing, with a variety of both push-broom and snap-shot systems becoming available. However, information on their radiometric performance and stability over time is often lacking. The authors propose the use of a general protocol for sensor evaluation to characterize the data retrieval and radiometric performance of push-broom hyperspectral cameras, and illustrate the workflow with the Nano-Hyperspec (Headwall Photonics, Boston USA) sensor. The objectives of this analysis were to: (1) assess dark current and white reference consistency, both temporally and spatially; (2) evaluate spectral fidelity; and (3) determine the relationship between sensor-recorded radiance and spectroradiometer-derived reflectance. Both the laboratory-based dark current and white reference evaluations showed an insignificant increase over time (<2%) across spatial pixels and spectral bands for >99.5% of pixel-waveband combinations. Using a mercury/argon (Hg/Ar) lamp, the hyperspectral wavelength bands exhibited a slight shift of 1-3 nm against 29 Hg/Ar wavelength emission lines. The relationship between the Nano-Hyperspec radiance values and spectroradiometer-derived reflectance was found to be highly linear for all spectral bands. The developed protocol for assessing UAV-based radiometric performance of hyperspectral push-broom sensors showed that the Nano-Hyperspec data were both time-stable and spectrally sound.

5.
Sci Rep ; 14(1): 4648, 2024 Feb 26.
Artigo em Inglês | MEDLINE | ID: mdl-38409194

RESUMO

Mangrove forests are recognized as one of the most effective ecosystems for storing carbon. In drylands, mangroves operate at the extremes of environmental gradients and, in many instances, offer one of the few opportunities for vegetation-based sequestering of carbon. Developing accurate and reproducible methods to map carbon assimilation in mangroves not only serves to inform efforts related to natural capital accounting, but can help to motivate their protection and preservation. Remote sensing offers a means to retrieve numerous vegetation traits, many of which can be related to plant biophysical or biochemical responses. The leaf area index (LAI) is routinely employed as a biophysical indicator of health and condition. Here, we apply a linear regression model to UAV-derived multispectral data to retrieve LAI across three mangrove sites located along the coastline of the Red Sea, with estimates producing an R2 of 0.72 when compared against ground-sampled LiCOR LAI-2200C LAI data. To explore the potential of monitoring carbon assimilation within these mangrove stands, the UAV-derived LAI estimates were combined with field-measured net photosynthesis rates from a LiCOR 6400/XT, providing a first estimate of carbon assimilation in dryland mangrove systems of approximately 3000 ton C km-2 yr-1. Overall, these results advance our understanding of carbon assimilation in dryland mangroves and provide a mechanism to quantify the carbon mitigation potential of mangrove reforestation efforts.

6.
Trends Plant Sci ; 28(5): 537-543, 2023 05.
Artigo em Inglês | MEDLINE | ID: mdl-36740490

RESUMO

Greenhouse gas (GHG) emissions have created a global climate crisis which requires immediate interventions to mitigate the negative effects on all aspects of life on this planet. As current agriculture and land use contributes up to 25% of total GHG emissions, plant scientists take center stage in finding possible solutions for a transition to sustainable agriculture and land use. In this article, the PlantACT! (Plants for climate ACTion!) initiative of plant scientists lays out a road map of how and in which areas plant scientists can contribute to finding immediate, mid-term, and long-term solutions, and what changes are necessary to implement these solutions at the personal, institutional, and funding levels.


Assuntos
Agricultura , Gases de Efeito Estufa , Gases de Efeito Estufa/análise , Plantas , Mudança Climática , Efeito Estufa
7.
Front Plant Sci ; 13: 722442, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-35360313

RESUMO

Monitoring leaf Chlorophyll (Chl) in-situ is labor-intensive, limiting representative sampling for detailed mapping of Chl variability at field scales across time. Unmanned aeria-l vehicles (UAV) and hyperspectral cameras provide flexible platforms for observing agricultural systems, overcoming this spatio-temporal sampling constraint. Here, we evaluate a customized machine learning (ML) workflow to retrieve multi-temporal leaf-Chl levels, combining sub-centimeter resolution UAV-hyperspectral imagery (400-1,000 nm) with leaf-level reflectance spectra and SPAD measurements, capturing temporal correlations, selecting relevant predictors, and retrieving accurate results under different conditions. The study is performed within a phenotyping experiment to monitor wild tomato plants' development. Several analyses were conducted to evaluate multiple ML strategies, including: (1) exploring sequential versus retraining learning; (2) comparing insights gained from using 272 spectral bands versus 60 pigment-based vegetation indices (VIs); and (3) assessing six regression methods (linear, partial-least-square regression; PLSR, decision trees, support vector, ensemble trees, and Gaussian process; GPR). Goodness-of-fit (R 2) and accuracy metrics (MAE, RMSE) were determined using training/testing and validation data subsets to assess the models' performance. Overall, while equally good performance was obtained using either PLSR, GPR, or random forest, results show: (1) the retraining strategy improved the ability of most of the approaches to model SPAD-based Chl dynamics; (2) comparative analysis between retrievals and validation data distributions informed the models' ability to capture Chl dynamics through SPAD levels; (3) VI predictors slightly improved R 2 (e.g., from 0.59 to 0.74 units for GPR) and accuracy (e.g., MAE and RMSE differences of up to 2 SPAD units) in specific algorithms; (4) feature importance examined through these methods, revealed strong overlaps between relevant bands and VI predictors, highlighting a few decisive spectral ranges and indices useful for retrieving leaf-Chl levels. The proposed ML framework allows the retrieval of high-quality spatially distributed and multi-temporal SPAD-based chlorophyll maps at an ultra-high pixel resolution (e.g., 7 mm).

8.
Water Res ; 219: 118531, 2022 Jul 01.
Artigo em Inglês | MEDLINE | ID: mdl-35526428

RESUMO

Sub-daily tracking of dynamic features and events using high spatial resolution satellite imagery has only recently become possible, with advanced observational capabilities now available through tasking of satellite constellations. Here, we provide a first of its kind demonstration of using sub-daily 0.50 m resolution SkySat imagery to track coastal water flows, combining these data with object-based detection and a machine-learning approach to map the extent and concentration of two dye plumes. Coincident high-frequency unmanned aerial vehicle (UAV) imagery was also employed for quantitative modeling of dye concentration and evaluation of the sub-daily satellite-based dye tracking. Our results show that sub-daily SkySat imagery can track dye plume extent with low omission (8.73-16.05%) and commission errors (0.32-2.77%) and model dye concentration (coefficient of determination = 0.73; root mean square error = 28.68 ppb) with the assistance of high-frequency UAV data. The results also demonstrate the capabilities of using UAV imagery for scaling between field data and satellite imagery for tracking coastal water flow dynamics. This research has implications for monitoring of water flows and nutrient or pollution exchange, and it also demonstrates the capabilities of higher temporal resolution satellite data for delivering further insights into dynamic processes of coastal systems.

9.
Sci Total Environ ; 843: 157098, 2022 Oct 15.
Artigo em Inglês | MEDLINE | ID: mdl-35779736

RESUMO

Mangrove ecosystems represent one of the most effective natural environments for fixing and storing carbon (C). Mangroves also offer significant co-benefits, serving as nurseries for marine species, providing nutrients and food to support marine ecosystems, and stabilizing coastlines from erosion and extreme events. Given these considerations, mangrove afforestation and associated C sequestration has gained considerable attention as a nature-based solution to climate adaptation (e.g., protect against more frequent storm surges) and mitigation (e.g. offsetting other C-producing activities). To advance our understanding and description of these important ecosystems, we leverage Landsat-8 and Sentinel-2 satellite data to provide a current assessment of mangrove extent within the Red Sea region and also explore the effect of spatial resolution on mapping accuracy. We establish that Sentinel-2 provides a more precise spatial record of extent and subsequently use these data together with a maximum entropy (MaxEnt) modeling approach to: i) map the distribution of Red Sea mangrove systems, and ii) identify potential areas for future afforestation. From these current and potential mangrove distribution maps, we then estimate the carbon sequestration rate for the Red Sea (as well as for each bordering country) using a meta-analysis of sequestration values surveyed from the available literature. For the mangrove classification, we obtained mapping accuracies of 98 %, with a total Red Sea mangrove extent estimated at approximately 175 km2. Based on the MaxEnt approach, which used soil physical and environmental variables to identify the key factors limiting mangrove growth and distribution, an area of nearly 410 km2 was identified for potential mangrove afforestation expansion. The factors constraining the potential distribution of mangroves were related to soil physical properties, likely reflecting the low sediment load and limited nutrient input of the Red Sea. The current rate of carbon sequestration was calculated as 1034.09 ± 180.53 Mg C yr-1, and the potential sequestration rate as 2424.49 ± 423.26 Mg C yr-1. While our results confirm the maintenance of a positive trend in mangrove growth over the last few decades, they also provide the upper bounds on above ground carbon sequestration potential for the Red Sea mangroves.


Assuntos
Ecossistema , Rhizophoraceae , Carbono , Sequestro de Carbono , Oceano Índico , Solo , Áreas Alagadas
10.
Sci Rep ; 12(1): 5244, 2022 03 28.
Artigo em Inglês | MEDLINE | ID: mdl-35347221

RESUMO

Satellite remote sensing has great potential to deliver on the promise of a data-driven agricultural revolution, with emerging space-based platforms providing spatiotemporal insights into precision-level attributes such as crop water use, vegetation health and condition and crop response to management practices. Using a harmonized collection of high-resolution Planet CubeSat, Sentinel-2, Landsat-8 and additional coarser resolution imagery from MODIS and VIIRS, we exploit a multi-satellite data fusion and machine learning approach to deliver a radiometrically calibrated and gap-filled time-series of daily leaf area index (LAI) at an unprecedented spatial resolution of 3 m. The insights available from such high-resolution CubeSat-based LAI data are demonstrated through tracking the growth cycle of a maize crop and identifying observable within-field spatial and temporal variations across key phenological stages. Daily LAI retrievals peaked at the tasseling stage, demonstrating their value for fertilizer and irrigation scheduling. An evaluation of satellite-based retrievals against field-measured LAI data collected from both rain-fed and irrigated fields shows high correlation and captures the spatiotemporal development of intra- and inter-field variations. Novel agricultural insights related to individual vegetative and reproductive growth stages were obtained, showcasing the capacity for new high-resolution CubeSat platforms to deliver actionable intelligence for precision agricultural and related applications.


Assuntos
Agricultura , Folhas de Planta , Fertilizantes , Chuva , Zea mays
11.
Sci Rep ; 12(1): 1141, 2022 01 21.
Artigo em Inglês | MEDLINE | ID: mdl-35064186

RESUMO

Coastal water flows facilitate important nutrient exchanges between mangroves, seagrasses and coral reefs. However, due to the complex nature of tidal interactions, their spatiotemporal development can be difficult to trace via traditional field instrumentations. Unmanned aerial vehicles (UAVs) serve as ideal platforms from which to capture such dynamic responses. Here, we provide a UAV-based approach for tracing coastal water flows using object-based detection of dye plume extent coupled with a regression approach for mapping dye concentration. From hovering UAV images and nine subsequent flight surveys covering the duration of an ebbing tide in the Red Sea, our results show that dye plume extent can be mapped with low omission and commission errors when assessed against manual delineations. Our results also demonstrated that the interaction term of two UAV-derived indices may be employed to accurately map dye concentration (coefficient of determination = 0.96, root mean square error = 7.78 ppb), providing insights into vertical and horizontal transportation and dilution of materials in the water column. We showcase the capabilities of high-frequency UAV-derived data and demonstrate how field-based dye concentration measurements can be integrated with UAV data for future studies of coastal water flow dynamics.

12.
Rapid Commun Mass Spectrom ; 25(20): 3071-82, 2011 Oct 30.
Artigo em Inglês | MEDLINE | ID: mdl-21953962

RESUMO

As an alternative to isotope ratio mass spectrometry (IRMS), the isotope ratio infrared spectroscopy (IRIS) approach has the advantage of low cost, continuous measurement and the capacity for field-based application for the analysis of the stable isotopes of water. Recent studies have indicated that there are potential issues of organic contamination of the spectral signal in the IRIS method, resulting in incorrect results for leaf samples. To gain a more thorough understanding of the effects of sample type (e.g., leaf, root, stem and soil), sample species, sampling time and climatic condition (dry vs. wet) on water isotope estimates using IRIS, we collected soil samples and plant components from a number of major species at a fine temporal resolution (every 2 h for 24-48 h) across three locations with different climatic conditions in the Heihe River Basin, China. The hydrogen and oxygen isotopic compositions of the extracted water from these samples were measured using both an IRMS and an IRIS instrument. The results show that the mean discrepancies between the IRMS and IRIS approaches for δ(18) O and δD, respectively, were: -5.6‰ and -75.7‰ for leaf water; -4.0‰ and -23.3‰ for stem water; -3.4‰ and -28.2‰ for root water; -0.5‰ and -6.7‰ for xylem water; -0.06‰ and -0.3‰ for xylem flow; and -0.1‰ and 0.3‰ for soil water. The order of the discrepancy was: leaf > stem ≈ root > xylem > xylem flow ≈ soil. In general, species of the same functional types (e.g., woody vs. herbaceous) within similar habitats showed similar deviations. For different functional types, the differences were large. Sampling at nighttime did not remove the observed deviations.

13.
Front Plant Sci ; 12: 734944, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-34777418

RESUMO

Soil and water salinization has global impact on the sustainability of agricultural production, affecting the health and condition of staple crops and reducing potential yields. Identifying or developing salt-tolerant varieties of commercial crops is a potential pathway to enhance food and water security and deliver on the global demand for an increase in food supplies. Our study focuses on a phenotyping experiment that was designed to establish the influence of salinity stress on a diversity panel of the wild tomato species, Solanum pimpinellifolium. Here, we explore how unoccupied aerial vehicles (UAVs) equipped with both an optical and thermal infrared camera can be used to map and monitor plant temperature (Tp) changes in response to applied salinity stress. An object-based image analysis approach was developed to delineate individual tomato plants, while a green-red vegetation index derived from calibrated red, green, and blue (RGB) optical data allowed the discrimination of vegetation from the soil background. Tp was retrieved simultaneously from the co-mounted thermal camera, with Tp deviation from the ambient temperature and its change across time used as a potential indication of stress. Results showed that Tp differences between salt-treated and control plants were detectable across the five separate UAV campaigns undertaken during the field experiment. Using a simple statistical approach, we show that crop water stress index values greater than 0.36 indicated conditions of plant stress. The optimum period to collect UAV-based Tp for identifying plant stress was found between fruit formation and ripening. Preliminary results also indicate that UAV-based Tp may be used to detect plant stress before it is visually apparent, although further research with more frequent image collections and field observations is required. Our findings provide a tool to accelerate field phenotyping to identify salt-resistant germplasm and may allow farmers to alleviate yield losses through early detection of plant stress via management interventions.

14.
Sci Rep ; 11(1): 12131, 2021 06 09.
Artigo em Inglês | MEDLINE | ID: mdl-34108564

RESUMO

Earth observation has traditionally required a compromise in data collection. That is, one could sense the Earth with high spatial resolution occasionally; or with lower spatial fidelity regularly. For many applications, both frequency and detail are required. Precision agriculture is one such example, with sub-10 m spatial, and daily or sub-daily retrieval representing a key goal. Towards this objective, we produced the first cloud-free 3 m daily evaporation product ever retrieved from space, leveraging recently launched nano-satellite constellations to showcase this emerging potential. Focusing on three agricultural fields located in Nebraska, USA, high-resolution crop water use estimates are delivered via CubeSat-based evaporation modeling. Results indicate good model agreement (r2 of 0.86-0.89; mean absolute error between 0.06 and 0.08 mm/h) when evaluated against corrected flux tower data. CubeSat technologies are revolutionizing Earth observation, delivering novel insights and new agricultural informatics that will enhance food and water security efforts, and enable rapid and informed in-field decision making.

15.
Environ Pollut ; 288: 117802, 2021 Nov 01.
Artigo em Inglês | MEDLINE | ID: mdl-34284210

RESUMO

This study investigates changes in air quality conditions during the restricted COVID-19 lockdown period in 2020 across 21 metropolitan areas in the Middle East and how these relate to surface urban heat island (SUHI) characteristics. Based on satellite observations of atmospheric gases from Sentinel-5, results indicate significant reductions in the levels of atmospheric pollutants, particularly nitrogen dioxide (NO2), sulfur dioxide (SO2), and carbon monoxide (CO). Air quality improved significantly during the middle phases of the lockdown (April and May), especially in small metropolitan cities like Amman, Beirut, and Jeddah, while it was less significant in "mega" cities like Cairo, Tehran, and Istanbul. For example, the concentrations of NO2 in Amman, Beirut, and Jeddah decreased by -56.6%, -43.4%, and -32.3%, respectively, during April 2020, compared to April 2019. Rather, there was a small decrease in NO2 levels in megacities like Tehran (-0.9%) and Cairo (-3.1%). Notably, during the lockdown period, there was a decrease in the mean intensity of nighttime SUHI, while the mean intensity of daytime SUHI experienced either an increase or a slight decrease across these locations. Together with the Gulf metropolitans (e.g. Kuwait, Dubai, and Muscat), the megacities (e.g. Tehran, Ankara, and Istanbul) exhibited anomalous increases in the intensity of daytime SUHI, which may exceed 2 °C. Statistical relationships were established to explore the association between changes in the mean intensity and the hotspot area in each metropolitan location during the lockdown. The findings indicate that the mean intensity of SUHI and the spatial extension of hotspot areas within each metropolitan had a statistically significant negative relationship, with Pearson's r values generally exceeding - 0.55, especially for daytime SUHI. This negative dependency was evident for both daytime and nighttime SUHI during all months of the lockdown. Our findings demonstrate that the decrease in primary pollutant levels during the lockdown contributed to the decrease in the intensity of nighttime SUHIs in the Middle East, especially in April and May. Changes in the characteristics of SUHIs during the lockdown period should be interpreted in the context of long-term climate change, rather than just the consequence of restrictive measures. This is simply because short-term air quality improvements were insufficient to generate meaningful changes in the region's urban climate.


Assuntos
Poluentes Atmosféricos , Poluição do Ar , COVID-19 , Poluentes Atmosféricos/análise , Poluição do Ar/análise , Cidades , Controle de Doenças Transmissíveis , Monitoramento Ambiental , Temperatura Alta , Humanos , Irã (Geográfico) , Oriente Médio , Melhoria de Qualidade , SARS-CoV-2
16.
Front Artif Intell ; 3: 28, 2020.
Artigo em Inglês | MEDLINE | ID: mdl-33733147

RESUMO

Biomass and yield are key variables for assessing the production and performance of agricultural systems. Modeling and predicting the biomass and yield of individual plants at the farm scale represents a major challenge in precision agriculture, particularly when salinity and other abiotic stresses may play a role. Here, we evaluate a diversity panel of the wild tomato species (Solanum pimpinellifolium) through both field and unmanned aerial vehicle (UAV)-based phenotyping of 600 control and 600 salt-treated plants. The study objective was to predict fresh shoot mass, tomato fruit numbers, and yield mass at harvest based on a range of variables derived from the UAV imagery. UAV-based red-green-blue (RGB) imageries collected 1, 2, 4, 6, 7, and 8 weeks before harvest were also used to determine if prediction accuracies varied between control and salt-treated plants. Multispectral UAV-based imagery was also collected 1 and 2 weeks prior to harvest to further explore predictive insights. In order to estimate the end of season biomass and yield, a random forest machine learning approach was implemented using UAV-imagery-derived predictors as input variables. Shape features derived from the UAV, such as plant area, border length, width, and length, were found to have the highest importance in the predictions, followed by vegetation indices and the entropy texture measure. The multispectral UAV imagery collected 2 weeks prior to harvest produced the highest explained variances for fresh shoot mass (87.95%), fruit numbers (63.88%), and yield mass per plant (66.51%). The RGB UAV imagery produced very similar results to those of the multispectral UAV dataset, with the explained variance reducing as a function of increasing time to harvest. The results showed that predicting the yield of salt-stressed plants produced higher accuracies when the models excluded control plants, whereas predicting the yield of control plants was not affected by the inclusion of salt-stressed plants within the models. This research demonstrates that it is possible to predict the average biomass and yield up to 8 weeks prior to harvest within 4.23% of field-based measurements and up to 4 weeks prior to harvest at the individual plant level. Results from this work may be useful in providing guidance for yield forecasting of healthy and salt-stressed tomato plants, which in turn may inform growing practices, logistical planning, and sales operations.

17.
Remote Sens (Basel) ; 11(9): 1138, 2019 May 01.
Artigo em Inglês | MEDLINE | ID: mdl-33505712

RESUMO

Characterizing the terrestrial carbon, water and energy cycles depends strongly on a capacity to accurately reproduce the spatial and temporal dynamics of land surface evaporation. For this, and many other reasons, monitoring terrestrial evaporation across multiple space and time scales has been an area of focused research for many decades. Much of this activity has been supported by developments in satellite remote sensing, which have been leveraged to deliver new process insights, model development and methodological improvements. In this Special Issue, published contributions explored a range of research topics directed towards the enhanced estimation of terrestrial evaporation. Here we summarize these cutting-edge efforts and provide an overview of some of the state-of-the-art approaches for retrieving this key variable. Some perspectives on outstanding challenges, issues, and opportunities are also presented.

18.
Front Plant Sci ; 10: 370, 2019.
Artigo em Inglês | MEDLINE | ID: mdl-30984222

RESUMO

With salt stress presenting a major threat to global food production, attention has turned to the identification and breeding of crop cultivars with improved salt tolerance. For instance, some accessions of wild species with higher salt tolerance than commercial varieties are being investigated for their potential to expand food production into marginal areas or to use brackish waters for irrigation. However, assessment of individual plant responses to salt stress in field trials is time-consuming, limiting, for example, longitudinal assessment of large numbers of plants. Developments in Unmanned Aerial Vehicle (UAV) sensing technologies provide a means for extensive, repeated and consistent phenotyping and have significant advantages over standard approaches. In this study, 199 accessions of the wild tomato species, Solanum pimpinellifolium, were evaluated through a field assessment of 600 control and 600 salt-treated plants. UAV imagery was used to: (1) delineate tomato plants from a time-series of eight RGB and two multi-spectral datasets, using an automated object-based image analysis approach; (2) assess four traits, i.e., plant area, growth rates, condition and Plant Projective Cover (PPC) over the growing season; and (3) use the mapped traits to identify the best-performing accessions in terms of yield and salt tolerance. For the first five campaigns, >99% of all tomato plants were automatically detected. The omission rate increased to 2-5% for the last three campaigns because of the presence of dead and senescent plants. Salt-treated plants exhibited a significantly smaller plant area (average control and salt-treated plant areas of 0.55 and 0.29 m2, respectively), maximum growth rate (daily maximum growth rate of control and salt-treated plant of 0.034 and 0.013 m2, respectively) and PPC (5-16% difference) relative to control plants. Using mapped plant condition, area, growth rate and PPC, we show that it was possible to identify eight out of the top 10 highest yielding accessions and that only five accessions produced high yield under both treatments. Apart from showcasing multi-temporal UAV-based phenotyping capabilities for the assessment of plant performance, this research has implications for agronomic studies of plant salt tolerance and for optimizing agricultural production under saline conditions.

19.
Mar Pollut Bull ; 131(Pt A): 662-673, 2018 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-29886994

RESUMO

A global beach litter assessment is challenged by use of low-efficiency methodologies and incomparable protocols that impede data integration and acquisition at a national scale. The implementation of an objective, reproducible and efficient approach is therefore required. Here we show the application of a remote sensing based methodology using a test beach located on the Saudi Arabian Red Sea coastline. Litter was recorded via image acquisition from an Unmanned Aerial Vehicle, while an automatic processing of the high volume of imagery was developed through machine learning, employed for debris detection and classification in three categories. Application of the method resulted in an almost 40 times faster beach coverage when compared to a standard visual-census approach. While the machine learning tool faced some challenges in correctly detecting objects of interest, first classification results are promising and motivate efforts to further develop the technique and implement it at much larger scales.


Assuntos
Aviação/instrumentação , Monitoramento Ambiental/métodos , Tecnologia de Sensoriamento Remoto/instrumentação , Tecnologia de Sensoriamento Remoto/métodos , Praias , Monitoramento Ambiental/instrumentação , Aprendizado de Máquina , Arábia Saudita , Resíduos
20.
Hydrol Earth Syst Sci ; 21(7): 3879-3914, 2017.
Artigo em Inglês | MEDLINE | ID: mdl-30233123

RESUMO

In just the past five years, the field of Earth observation has progressed beyond the offerings of conventional space agency based platforms to include a plethora of sensing opportunities afforded by CubeSats, Unmanned Aerial Vehicles (UAVs), and smartphone technologies that are being embraced by both for-profit companies and individual researchers. Over the previous decades, space agency efforts have brought forth well-known and immensely useful satellites such as the Landsat series and the Gravity Research and Climate Experiment (GRACE) system, with costs typically on the order of one billion dollars per satellite and with concept-to-launch timelines on the order of two decades (for new missions). More recently, the proliferation of smartphones has helped to miniaturise sensors and energy requirements, facilitating advances in the use of CubeSats that can be launched by the dozens, while providing ultra-high (3-5 m) resolution sensing of the Earth on a daily basis. Start-up companies that did not exist five years ago now operate more satellites in orbit than any space agency, and at costs that are a mere fraction of the cost of traditional satellite missions. With these advances come new space-borne measurements, such as real-time high-definition video for tracking air pollution, storm-cell development, flood propagation, precipitation monitoring, or even for constructing digital surfaces using structure-from-motion techniques. Closer to the surface, measurements from small unmanned drones and tethered balloons have mapped snow depths, floods, and estimated evaporation at sub-meter resolutions, pushing back on spatio-temporal constraints and delivering new process insights. At ground level, precipitation has been measured using signal attenuation between antennae mounted on cell phone towers, while the proliferation of mobile devices has enabled citizen-scientists to catalogue photos of environmental conditions, estimate daily average temperatures from battery state, and sense other hydrologically important variables such as channel depths using commercially available wireless devices. Global internet access is being pursued via high altitude balloons, solar planes, and hundreds of planned satellite launches, providing a means to exploit the Internet of Things as an entirely new measurement domain. Such global access will enable real-time collection of data from billions of smartphones or from remote research platforms. This future will produce petabytes of data that can only be accessed via cloud storage and will require new analytical approaches to interpret. The extent to which today's hydrologic models can usefully ingest such massive data volumes is unclear. Nor is it clear whether this deluge of data will be usefully exploited, either because the measurements are superfluous, inconsistent, not accurate enough, or simply because we lack the capacity to process and analyse them. What is apparent is that the tools and techniques afforded by this array of novel and game-changing sensing platforms present our community with a unique opportunity to develop new insights that advance fundamental aspects of the hydrological sciences. To accomplish this will require more than just an application of the technology: in some cases, it will demand a radical rethink on how we utilise and exploit these new observing systems to enhance our understanding of the Earth and its linked processes.

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