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1.
Mol Psychiatry ; 18(1): 122-32, 2013 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-22105623

RESUMO

Humans sleep approximately a third of their lifetime. The observation that individuals with either long or short sleep duration show associations with metabolic syndrome and psychiatric disorders suggests that the length of sleep is adaptive. Although sleep duration can be influenced by photoperiod (season) and phase of entrainment (chronotype), human familial sleep disorders indicate that there is a strong genetic modulation of sleep. Therefore, we conducted high-density genome-wide association studies for sleep duration in seven European populations (N=4251). We identified an intronic variant (rs11046205; P=3.99 × 10(-8)) in the ABCC9 gene that explains ≈5% of the variation in sleep duration. An influence of season and chronotype on sleep duration was solely observed in the replication sample (N=5949). Meta-analysis of the associations found in a subgroup of the replication sample, chosen for season of entry and chronotype, together with the discovery results showed genome-wide significance. RNA interference knockdown experiments of the conserved ABCC9 homologue in Drosophila neurons renders flies sleepless during the first 3 h of the night. ABCC9 encodes an ATP-sensitive potassium channel subunit (SUR2), serving as a sensor of intracellular energy metabolism.


Assuntos
Predisposição Genética para Doença/genética , Estudo de Associação Genômica Ampla , Canal de Potássio Kv1.3/genética , Polimorfismo de Nucleotídeo Único/genética , Transtornos do Sono-Vigília/genética , Transportadores de Cassetes de Ligação de ATP/genética , Adolescente , Adulto , Idoso , Idoso de 80 Anos ou mais , Animais , Animais Geneticamente Modificados , Estudos de Coortes , Drosophila/genética , Drosophila/fisiologia , Proteínas de Drosophila/genética , Feminino , Genótipo , Humanos , Masculino , Pessoa de Meia-Idade , Miocárdio/metabolismo , Miocárdio/patologia , Fenótipo , Fotoperíodo , Placofilinas/genética , Canais de Potássio Corretores do Fluxo de Internalização/genética , Interferência de RNA/fisiologia , Receptores de Droga/genética , Proteínas Repressoras/genética , Receptores de Sulfonilureias , População Branca , Adulto Jovem
2.
Onderstepoort J Vet Res ; 76(3): 285-9, 2009 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-21105595

RESUMO

Different species of trypanosomes may infect their mammalian hosts both singly or in combination. This study was undertaken to determine the trypanosome species that may be afflicting pigs in Uganda. Blood was collected from pigs of all ages and sexes from two districts, Kasese in Western and Jinja in Central Uganda. Of the 133 pig blood samples from Kasese that were tested for trypanosomes using the microhaematocrit centrifugation technique (MHCT), none was found to be infected. However, of the 253 pigs from Jinja district, nine were infected with trypanosomes of which three had T. vivax as determined by MHCT. However, application of the ITS1 rDNA PCR test revealed that eight pigs had T. vivax in mixed infections and one pig had T. vivax monolithic infection. These observations show that under certain circumstances, pigs may be important reservoirs for, as well as hosts to, T. vivax, contrary to earlier reports.


Assuntos
Reação em Cadeia da Polimerase/veterinária , Doenças dos Suínos/diagnóstico , Trypanosoma vivax/isolamento & purificação , Tripanossomíase Africana/veterinária , Animais , DNA Intergênico/análise , DNA de Protozoário/análise , DNA de Protozoário/sangue , DNA Ribossômico/análise , DNA Ribossômico/sangue , Reservatórios de Doenças/parasitologia , Reservatórios de Doenças/veterinária , Feminino , Amplificação de Genes , Hematócrito/veterinária , Masculino , Reação em Cadeia da Polimerase/métodos , Reação em Cadeia da Polimerase/normas , Sensibilidade e Especificidade , Suínos , Doenças dos Suínos/sangue , Doenças dos Suínos/epidemiologia , Trypanosoma vivax/genética , Tripanossomíase Africana/sangue , Tripanossomíase Africana/diagnóstico , Tripanossomíase Africana/epidemiologia , Uganda
3.
Mol Cell Biol ; 19(9): 5839-46, 1999 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-10454531

RESUMO

A number of mechanisms have been described by which African trypanosomes undergo the genetic switches that differentially activate their variant surface glycoprotein genes (VSGs) and bring about antigenic variation. These mechanisms have been observed mainly in trypanosome lines adapted, by rapid syringe passaging, to laboratory conditions. Such "monomorphic" lines, which routinely yield only the proliferative bloodstream form and do not develop through their life cycle, have VSG switch rates up to 4 or 5 orders of magnitude lower than those of nonadapted lines. We have proposed that nonadapted, or pleomorphic, trypanosomes normally have an active VSG switch mechanism, involving gene duplication, that is depressed, or from which a component is absent, in monomorphic lines. We have characterized 88 trypanosome clones from the first two relapse peaks of a single rabbit infection with pleomorphic trypanosomes and shown that they represent 11 different variable antigen types (VATs). The pattern of appearance in the first relapse peak was generally reproducible in three more rabbit infections. Nine of these VATs had activated VSGs by gene duplication, the tenth possibly also had done so, and only one had activated a VSG by the transcriptional switch mechanism that predominates in monomorphic lines. At least 10 of the donor genes have telomeric silent copies, and many reside on minichromosomes. It appears that trypanosome antigenic variation is dominated by one, relatively highly active, mechanism rather than by the plethora of pathways described before.


Assuntos
Variação Antigênica , Trypanosoma brucei brucei/genética , Trypanosoma brucei brucei/imunologia , Glicoproteínas Variantes de Superfície de Trypanosoma/genética , Animais , DNA Complementar/genética , DNA de Protozoário/genética , Duplicação Gênica , Genes de Protozoários , Genes de Troca , Camundongos , Camundongos Endogâmicos ICR , Coelhos , Tripanossomíase Africana/parasitologia
4.
Arch Dis Child Fetal Neonatal Ed ; 91(5): F337-41, 2006 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-16705008

RESUMO

OBJECTIVE: To determine, in prematurely born children who had bronchopulmonary dysplasia (BPD), if respiratory morbidity, healthcare utilisation, and cost of care during the preschool years were influenced by use of supplementary oxygen at home after discharge from the neonatal intensive care unit. DESIGN: Observational study. SETTING: Four tertiary neonatal intensive care units. PATIENTS: 190 children, median gestational age 27 weeks (range 22-31), 70 of whom received supplementary oxygen when discharged home. INTERVENTIONS: Review of hospital and general practitioner records together with a parent completed respiratory questionnaire. MAIN OUTCOME MEASURES: Healthcare utilisation, cost of care, cough, wheeze, and use of an inhaler. RESULTS: Seventy children had supplementary oxygen at home (home oxygen group), but only one had a continuous requirement for home oxygen beyond 2 years of age. There were no significant differences in the gestational age or birth weight of the home oxygen group compared with the rest of the cohort. However, between 2 and 4 years of age inclusive, the home oxygen group had more outpatient attendances (p = 0.0021) and specialist attendances (p = 0.0023), and, for respiratory problems, required more prescriptions (p<0.0001). Their total cost of care was higher (p<0.0001). In addition, more of the home oxygen group wheezed more than once a week (p = 0.0486) and were more likely to use an inhaler (p<0.0001). CONCLUSIONS: Children with BPD who have supplementary oxygen at home after discharge have increased respiratory morbidity and healthcare utilisation in the preschool years.


Assuntos
Displasia Broncopulmonar/terapia , Serviços de Saúde/estatística & dados numéricos , Serviços Hospitalares de Assistência Domiciliar/estatística & dados numéricos , Oxigenoterapia/estatística & dados numéricos , Peso ao Nascer , Idade Gestacional , Custos de Cuidados de Saúde/estatística & dados numéricos , Humanos , Recém-Nascido , Recém-Nascido Prematuro , Unidades de Terapia Intensiva Neonatal , Prognóstico , Transtornos Respiratórios/epidemiologia , Transtornos Respiratórios/etiologia , Fatores de Risco , Reino Unido/epidemiologia
5.
Cancer Res ; 50(4): 1125-31, 1990 Feb 15.
Artigo em Inglês | MEDLINE | ID: mdl-2297761

RESUMO

We have examined the responses of energy and protein metabolism to nutrient intake in nine patients with lung carcinoma, of whom none were cachexic and only one had distant metastases, compared with nine control patients for elective aneurysm surgery, who were comparable in terms of age, body mass index, and smoking habits. Whole-body protein turnover and leucine oxidation were assessed by primed continuous infusion of L-[13C]leucine. Indirect calorimetry was used to determine energy expenditure and rates of carbohydrate and fat utilization. Lean body mass (LBM) was estimated from dilution of deuterium oxide. Measurements were made over an 8-h period, including 4 h postabsorptive followed by 4 h of feeding, during which small hourly meals were consumed. In the post-absorptive state, the rate of incorporation of leucine into protein was higher in the cancer group (mean +/- SD, cancer versus control: 102 +/- 21 versus 86 +/- 8 mumol/kg LBM/h, P less than 0.05), as was the release of leucine by protein degradation (126 +/- 19 versus 110 +/- 10 mumol/kg LBM/h, P less than 0.01), but there was no difference in rates of leucine oxidation (27 +/- 6 versus 27 +/- 5 mumol/kg LBM/h) or leucine balance (-25 +/- 7 versus -24 +/- 4 mumol/kg LBM/h). There were no differences between the cancer and control groups with respect to either resting energy expenditure (37.3 +/- 3.5 versus 35.2 +/- 3.8 kcal LBM/day) or the postabsorptive pattern of nutrient utilization (61 +/- 13% fat, 26 +/- 10% carbohydrate, and 13 +/- 2% protein versus 65 +/- 7%, 21 +/- 7%, and 14 +/- 2%, respectively). During feeding, leucine oxidation rose relative to the postabsorptive state, incorporation into protein remained the same, and release by protein degradation fell. Incorporation (106 +/- 20 versus 89 +/- 7 mumol/kg LBM/h, P less than 0.05) and release (59 +/- 12 versus 42 +/- 14 mumol/kg LBM/h, P less than 0.02) remained higher in the cancer group than in controls, but leucine oxidation (43 +/- 15 versus 43 +/- 12 mumol/kg LBM/h) and leucine balance (+48 +/- 10 versus +47 +/- 12 mumol/kg LBM/h) were the same. Energy expenditure during feeding increased to 43.8 +/- 5.1 versus 43.2 +/- 4.2 kcal/kg LBM/day, derived from 32 +/- 11% fat, 52 +/- 9% carbohydrate, and 16 +/- 5% protein in cancer patients and 36 +/- 7%, 48 +/- 8%, and 16 +/- 4%, respectively, in controls.(ABSTRACT TRUNCATED AT 400 WORDS)


Assuntos
Metabolismo Energético , Leucina/metabolismo , Neoplasias Pulmonares/metabolismo , Proteínas/metabolismo , Idoso , Metabolismo dos Carboidratos , Ingestão de Energia , Feminino , Humanos , Leucina/administração & dosagem , Metabolismo dos Lipídeos , Masculino , Pessoa de Meia-Idade , Redução de Peso
6.
Gene ; 210(2): 325-33, 1998 Apr 14.
Artigo em Inglês | MEDLINE | ID: mdl-9573393

RESUMO

Leishmania braziliensis M2903 contains a highly amplified small chromosome. This work is aimed at resolving its structural organization and determining whether this unusual chromosome contains specific genes encoding proteins with important functions in disease pathology or drug resistance. Our results show that the M2903 250-kb small chromosome contains LD1 sequences and has an inverted repeat structure. The LD1 sequences and two cDNAs (cDNA2 and cDNA53) were mapped on a cosmid contig, and the two cDNAs and the corresponding genomic fragments from the small chromosome were sequenced. The gene encoding cDNA2 predicts a putative GTP-binding protein with homology to other GTP-binding proteins only in the G-1 domain region; however, four other conserved motifs can be recognized. Sequence similarity to cDNA53 is located in at least five chromosomes, and its small chromosome copy is a pseudogene. An open reading frame downstream of the cDNA53 pseudogene predicts another GTP-binding protein that belongs to a new G-protein family with an unusual conserved GTP-binding domain and a newly characterized conserved sequence motif. A portion of this GTP-binding protein gene was studied previously in L. aethiopica as a recombinant antigen that reacts with human antibodies.


Assuntos
Antígenos de Protozoários/genética , Proteínas de Ligação ao GTP/genética , Leishmania braziliensis/genética , Proteínas de Protozoários , Sequência de Aminoácidos , Animais , Cromossomos , Humanos , Dados de Sequência Molecular
7.
Mol Biochem Parasitol ; 111(2): 261-73, 2000 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-11163435

RESUMO

We present the molecular karyotype of the megabase chromosomes of Trypanosoma brucei stock 427, clone 221a. This cloned stock is most commonly used in research laboratories in genetic manipulation experiments and in studies of antigenic variation. Using 116 previously characterised chromosome-specific markers, we identify 11 diploid pairs of megabase chromosomes and detect no loss of synteny in EST and gene marker distribution between this stock and the genome project reference stock TREU 927/4. Nevertheless, the chromosomes of 427 are all larger than their homologues in 927, except chromosomes IIa and IXa. The greatest size variation is seen in chromosome I, the smallest of which is 1.1 Mb (927-Ia) and the largest 3.6 Mb (427-Ib). The total nuclear DNA content of both stocks has been estimated by comparison of the mobility of T. brucei and yeast chromosomes. Trypanosomes of stock 427 contain approximately 16.5 Mb more megabase chromosomal DNA than those of stock 927. We have detected the presence of bloodstream-form expression-site-associated sequences on eight or more megabase chromosomes. These sequences are not found on the same chromosomes in each stock. We have determined the chromosomal band location of nine characterised variant surface glycoprotein genes, including the currently expressed VSG 221. Our results demonstrate both the stability of the T. brucei genome, as illustrated by the conservation of syntenic groups of genes in the two stocks, and the polymorphic nature of the genomic regions involved in antigenic variation. We propose that the chromosomes of stock 427 be numbered to correspond to their homologues in the genome project reference stock TREU 927/4.


Assuntos
Cromossomos/genética , Genoma de Protozoário , Cariotipagem , Trypanosoma brucei brucei/genética , Glicoproteínas Variantes de Superfície de Trypanosoma/genética , Animais , Mapeamento Cromossômico , Eletroforese em Gel de Campo Pulsado , Dados de Sequência Molecular , Análise de Sequência de DNA , Trypanosoma brucei brucei/fisiologia , Glicoproteínas Variantes de Superfície de Trypanosoma/metabolismo
8.
Mol Biochem Parasitol ; 101(1-2): 81-94, 1999 Jun 25.
Artigo em Inglês | MEDLINE | ID: mdl-10413045

RESUMO

African trypanosomes express a heterodimeric transferrin receptor that mediates iron uptake from the host bloodstream. The genes encoding the receptor, ESAG6 and ESAG7, are found at the beginning of VSG expression sites: these are telomeric, polycistronic transcription units that each terminate with a gene encoding a trypanosome variant surface glycoprotein, VSG. Approximately 20 of these VSG expression sites are found in the trypanosome genome, but only one VSG is expressed at a time. The conventional view is that one expression site promoter is extremely active whereas the others are either inactive or show very low, poorly processive activity, and that all transferrin receptor molecules are encoded by the active expression site. The 3'-end of the ESAG6 gene is more than 5 kb from the promoter. We show here that 20% of ESAG6 mRNA originates from the 'inactive' expression sites. We suggest that many expression site promoters in trypanosomes show low-level activity throughout the life cycle, and that transcription proceeds for at least 5 kb. This suggests a simplified model of VSG expression site control, whereby the only regulated event is the strong activation of a single expression site promoter in bloodstream forms.


Assuntos
Glicoproteínas/genética , Proteínas de Protozoários/genética , Receptores da Transferrina/genética , Transcrição Gênica , Trypanosoma brucei brucei/genética , Glicoproteínas Variantes de Superfície de Trypanosoma/genética , Sequência de Aminoácidos , Animais , Sequência de Bases , Clonagem Molecular , DNA de Protozoário , Deleção de Genes , Regulação da Expressão Gênica , Glicoproteínas/química , Dados de Sequência Molecular , Proteínas de Protozoários/química , RNA Mensageiro/genética , RNA Mensageiro/metabolismo , RNA de Protozoário/genética , RNA de Protozoário/metabolismo , Receptores da Transferrina/química , Alinhamento de Sequência , Análise de Sequência de DNA , Trypanosoma brucei brucei/crescimento & desenvolvimento , Trypanosoma brucei brucei/metabolismo
9.
Mol Biochem Parasitol ; 112(1): 19-28, 2001 Jan 15.
Artigo em Inglês | MEDLINE | ID: mdl-11166383

RESUMO

In this study, we describe the isolation and characterization of a new adenylyl cyclase from Trypanosoma brucei and its activation by dimerization of the catalytic domain. In agreement with the current nomenclature of trypanosomal adenylyl cyclases, this new gene is termed GRESAG4.4B. The complete ORF of the GRESAG4.4B gene encodes a protein of 1291 amino acids. Its predicted protein structure is consistent with the structure of other trypanosomal cyclases, and with the cyclases of L. donovani. GRESAG 4.4B is constitutively expressed during the life cycle of trypanosomes. GRESAG4.4B is a member of a gene family, which contains at least six members, which are all clustered on chromosome IV. The catalytic domain of GRESAG4.4B is able to dimerize spontaneously. However, these spontaneously formed, stable dimers only show minimal enzymatic activity. The addition of a leucine zipper (LZ) derived from the S. cerevisiae GCN 4 gene to the N-terminus of the catalytic domain of GRESAG4.4B strongly activated its enzymatic activity. The LZ appears to enforce a distinct conformation of the dimer, which leads to an increased enzymatic activity, and thus may mimic the effect of ligand-induced dimerization of adenylyl cyclase in vivo.


Assuntos
Adenilil Ciclases/genética , Adenilil Ciclases/metabolismo , Regulação Enzimológica da Expressão Gênica , Trypanosoma brucei brucei/enzimologia , Trypanosoma brucei brucei/genética , Adenilil Ciclases/química , Adenilil Ciclases/isolamento & purificação , Sequência de Aminoácidos , Animais , Domínio Catalítico/genética , Domínio Catalítico/fisiologia , Mapeamento Cromossômico , Dimerização , Ativação Enzimática , Zíper de Leucina/genética , Zíper de Leucina/fisiologia , Dados de Sequência Molecular , Proteínas Recombinantes/metabolismo , Tripanossomíase Africana/parasitologia
10.
Mol Biochem Parasitol ; 94(2): 155-73, 1998 Aug 01.
Artigo em Inglês | MEDLINE | ID: mdl-9747967

RESUMO

We present the molecular karyotype of the megabase chromosomes of Trypanosoma brucei stock TREU927/4 (927). We have identified 11 diploid chromosomes ranging in size from 1 to 5.2 Mb approximately and pairs of homologues differ in size by up to 15%. A total of 401 cDNA probes were hybridised to T. brucei stock 927 chromosomes and 168 chromosome-specific markers were defined. Most of these markers were hybridised to the separated chromosomal DNA of two other cloned field isolates and four F1 progeny clones from a laboratory cross. The chromosomes vary in size by up to two and a half times between stocks and the DNA content of the 11 pairs of homologues varies by up to 33% in different stocks. Stock 927 contains the smallest chromosomes and the least nuclear genomic DNA. Nevertheless, all 11 syntenic groups of cDNA probes are maintained in all stocks. In the F1 hybrids only we have identified one extra PFG band to which none of our probes hybridise. We have shown that probes thought to be specific for the bloodstream-form variant surface glycoprotein expression sites hybridise to different chromosomes in different stocks and may hybridise to either one or both of a homologous pair of chromosomes. We have also determined the chromosomal location of the ribosomal RNA gene arrays.


Assuntos
Genes de Protozoários , Marcadores Genéticos/genética , Cariotipagem , Trypanosoma brucei brucei/genética , Animais , Bandeamento Cromossômico , Mapeamento Cromossômico , Cromossomos , Sondas de DNA , DNA Complementar , DNA de Protozoário , Diploide , Eletroforese em Gel de Campo Pulsado , Genes de RNAr , Hibridização de Ácido Nucleico , Polimorfismo Genético , Glicoproteínas Variantes de Superfície de Trypanosoma/genética
11.
Mol Biochem Parasitol ; 104(1): 1-9, 1999 Oct 25.
Artigo em Inglês | MEDLINE | ID: mdl-10589977

RESUMO

The megabase chromosomes of Trypanosoma brucei are normally diploid, but the extent to which this ploidy is maintained when parasites undergo genetic exchange is not known. To investigate this issue, a panel of 30 recombinant clones resulting from the co-transmission through tsetse flies of three different parental T. brucei lines in all pair-wise combinations (STIB 247, STIB 386 and TREU 927/4) were examined. These clones are products of 28 different mating events; four of them result from self-fertilisation and the others are F1 hybrids. DNA contents of the three parental lines were determined by flow cytometry and shown to differ only slightly with DNA content increasing in the order 927/4 < 247 < 386. Flow cytometry of the recombinant clones indicated DNA contents were similar to the parents in 28 clones and raised approximately 1.5 times the parental values in only two. The two F1 hybrid progeny with raised DNA contents were shown by marker analysis to be trisomic for seven independent loci indicating that they were probably triploid whereas progeny with DNA contents similar to parental values inherited a single allele from each parent for four independent loci indicating that they were diploid.


Assuntos
Ploidias , Trypanosoma brucei brucei/genética , Animais , Cruzamentos Genéticos , DNA de Protozoário/análise , Marcadores Genéticos , Cariotipagem , Repetições Minissatélites , Moscas Tsé-Tsé
12.
Int J Parasitol ; 31(5-6): 532-6, 2001 May 01.
Artigo em Inglês | MEDLINE | ID: mdl-11334938

RESUMO

During 1993-1994, scientists from developing and developed countries planned and initiated a number of parasite genome projects and several consortiums for the mapping and sequencing of these medium-sized genomes were established, often based on already ongoing scientific collaborations. Financial and other support came from WHO/TDR, Wellcome Trust and other funding agencies. Thus, the genomes of Plasmodium falciparum, Schistosoma mansoni, Trypanosoma cruzi, Leishmania major, Trypanosoma brucei, Brugia malayi and other pathogenic nematodes are now under study. From an initial phase of network formation, mapping efforts and resource building (EST, GSS, phage, cosmid, BAC and YAC library constructions), sequencing was initiated in gene discovery projects but soon also on a small chromosome, and now on a fully fledged genome scale. Proteomics, functional analysis, genetic manipulation and microarray analysis are ongoing to different degrees in the respective genome initiatives, and as the funding for the whole genome sequencing becomes secured, most of the participating laboratories, apart from larger sequencing centres, become oriented to post-genomics. Bioinformatics networks are being expanded, including in developing countries, for data mining, annotation and in-depth analysis.


Assuntos
Genoma de Protozoário , Leishmania major/genética , Trypanosoma brucei brucei/genética , Trypanosoma cruzi/genética , Animais , DNA de Protozoário/química , Leishmania major/química , Análise de Sequência de DNA , Trypanosoma brucei brucei/química , Trypanosoma cruzi/química
13.
Int J Parasitol ; 30(4): 329-45, 2000 Apr 10.
Artigo em Inglês | MEDLINE | ID: mdl-10731558

RESUMO

The haploid nuclear genome of the African trypanosome, Trypanosoma brucei, is about 35 Mb and varies in size among different trypanosome isolates by as much as 25%. The nuclear DNA of this diploid organism is distributed among three size classes of chromosomes: the megabase chromosomes of which there are at least 11 pairs ranging from 1 Mb to more than 6 Mb (numbered I-XI from smallest to largest); several intermediate chromosomes of 200-900 kb and uncertain ploidy; and about 100 linear minichromosomes of 50-150 kb. Size differences of as much as four-fold can occur, both between the two homologues of a megabase chromosome pair in a specific trypanosome isolate and among chromosome pairs in different isolates. The genomic DNA sequences determined to date indicated that about 50% of the genome is coding sequence. The chromosomal telomeres possess TTAGGG repeats and many, if not all, of the telomeres of the megabase and intermediate chromosomes are linked to expression sites for genes encoding variant surface glycoproteins (VSGs). The minichromosomes serve as repositories for VSG genes since some but not all of their telomeres are linked to unexpressed VSG genes. A gene discovery program, based on sequencing the ends of cloned genomic DNA fragments, has generated more than 20 Mb of discontinuous single-pass genomic sequence data during the past year, and the complete sequences of chromosomes I and II (about 1 Mb each) in T. brucei GUTat 10.1 are currently being determined. It is anticipated that the entire genomic sequence of this organism will be known in a few years. Analysis of a test microarray of 400 cDNAs and small random genomic DNA fragments probed with RNAs from two developmental stages of T. brucei demonstrates that the microarray technology can be used to identify batteries of genes differentially expressed during the various life cycle stages of this parasite.


Assuntos
Genoma de Protozoário , Trypanosoma brucei brucei/genética , Animais , Variação Antigênica , Etiquetas de Sequências Expressas , Cariotipagem
14.
Pediatr Infect Dis J ; 20(6): 602-6, 2001 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-11419503

RESUMO

BACKGROUND: The Pediatric Spectrum of HIV Diseases (PSD) project has been collecting data on HIV-exposed children in Texas since 1989. These data have now been analyzed to describe mother-to-child transmission in Texas and to provide much needed information on the magnitude of the pediatric HIV epidemic in the state. METHODS: We examined trends in the numbers of perinatally exposed children and perinatally acquired cases of HIV in the Texas PSD cohort. We calculated transmission rates and relative risks for 656 children born from January, 1995, to July, 1998, that received all or part of the ACTG 076 regimen. RESULTS: Only a small proportion (38%) of pairs of an HIV-infected mother and her HIV-exposed child received the full AIDS Clinical Trial Group 076 (ACTG 076) regimen; only 73% of the mothers received at least some prenatal care. In recent years, however, the numbers of perinatally exposed children and perinatally acquired cases of HIV have decreased in Texas. Univariate analyses showed that a reduction in the vertical transmission of HIV was associated with receipt of a full ACTG 076 regimen, receipt of a partial ACTG 076 regimen and residence in Dallas County. CONCLUSIONS: Findings identify a gap in meeting the health care needs of pregnant HIV-infected women and suggest missed opportunities to prevent mother-to-child transmission of HIV. At the same time this study confirms progress in prevention efforts to reduce mother-to-child transmission of HIV in Texas.


Assuntos
Infecções por HIV/transmissão , Transmissão Vertical de Doenças Infecciosas , Fármacos Anti-HIV/uso terapêutico , Feminino , Infecções por HIV/epidemiologia , Infecções por HIV/prevenção & controle , Humanos , Recém-Nascido , Transmissão Vertical de Doenças Infecciosas/prevenção & controle , Masculino , Gravidez , Complicações Infecciosas na Gravidez , Cuidado Pré-Natal , Fatores de Risco , Texas/epidemiologia , Zidovudina/uso terapêutico
15.
Ann N Y Acad Sci ; 918: 236-46, 2000 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-11131710

RESUMO

BACKGROUND: In response to recent reports of mitochondrial dysfunction in HIV-uninfected infants exposed to antiretroviral (ARV) prophylaxis, the Perinatal Safety Review Working Group reviewed deaths in five large HIV-exposed perinatal cohorts in the United States to determine if similar cases of severe mitochondrial toxicity could be detected. We describe the results of this review for the PSD cohort. METHODS: Hospitalization, clinic and death records for deceased HIV-uninfected and HIV-indeterminate children who were less than 5 years of age were reviewed. Standard definitions were used to classify HIV infection status and the likelihood that signs and symptoms were related to mitochondrial dysfunction. Children were classified as having signs and symptoms that were considered (1) unrelated, (2) unlikely, (3) consistent with, or (4) likely related to mitochondrial disease. SIDS deaths were put into a separate category. RESULTS: 8,465 of 13,125 HIV-exposed children were either HIV-uninfected or HIV-indeterminate. Among the 84 deaths in the subgroup of 8,465 children, 9 were considered in Class 2 (unlikely), 4 were considered in Class 3 (consistent with), and none were considered in Class 4 (likely). 97% of those children who received ARV prophylaxis received zidovudine alone. None of the HIV-uninfected deaths were classified in 2, 3, or 4; and only one of these was exposed to ARV prophylaxis. Among the 3 HIV-indeterminate children who were classified in 3 (consistent with), 2 had no or unknown ARV exposure before 1994 when use of ZDV prophylaxis became the standard of care. Both HIV-uninfected and HIV-indeterminate children with ARV exposure or unknown exposure had lower mortality rates than children without ARV exposure. CONCLUSION: Monoprophylaxis with ZDV was not associated with higher death rates in the cohort of 8,465 children or with any findings likely consistent with mitochondrial dysfunction among the 85 deaths. Ongoing monitoring of drug safety in large multi-site prospective cohort studies of HIV-exposed children is essential in the era of highly active antiretroviral therapy.


Assuntos
Infecções por HIV/mortalidade , Miopatias Mitocondriais/etiologia , Síndrome da Imunodeficiência Adquirida/prevenção & controle , Síndrome da Imunodeficiência Adquirida/transmissão , Fármacos Anti-HIV/efeitos adversos , Fármacos Anti-HIV/uso terapêutico , Causas de Morte , Pré-Escolar , Estudos de Coortes , Feminino , Infecções por HIV/prevenção & controle , Infecções por HIV/transmissão , Humanos , Lactente , Recém-Nascido , Transmissão Vertical de Doenças Infecciosas , Miopatias Mitocondriais/mortalidade , Gravidez , Complicações Infecciosas na Gravidez/tratamento farmacológico , Efeitos Tardios da Exposição Pré-Natal , Segurança , Estados Unidos
16.
Metabolism ; 38(3): 248-55, 1989 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-2493121

RESUMO

The effect of feeding on whole-body protein turnover was measured in six healthy volunteers using the essential amino acid, L-[1-13C]leucine, as a tracer for protein metabolism. Varied lengths of periods of feeding and isotope infusion produced different apparent responses to feeding. When parameters of protein turnover were estimated from 8-hour infusions, the change from post-absorptive in the first four hours to mixed feeding during the final four hours was found to produce positive leucine balance by decreasing degradation from 89.5 +/- 5.0 to 31.7 +/- 7.3 mumol leucine/kg/h (P less than .001), with no apparent change in synthesis. By contrast, when tracer was infused for 24 hours with 12 hours of feeding followed by 12 hours of fasting, the estimate of protein synthesis during feeding was 35% higher than during fasting (P less than .01). However, when tracer infusion during the 12-hour feeding/12-hour fasting protocol was limited to the last four hours of each nutritional period, the estimates of fed and fasted protein synthesis showed no significant difference, 71.3 +/- 6.5 and 66.2 +/- 5.6 respectively, while the calculated rate of protein degradation was 43% lower during feeding (P less than .002). As relatively higher levels of enrichment in plasma leucine were detected in comparable nutritional states following longer infusions, the possibility of significant recycling of label was investigated. Residual tracer was still detectable in both breath and plasma 12 hours after cessation of a 12-hour tracer infusion, supporting the conclusion that significant errors in estimates of protein turnover due to recycling of label arise with prolonged infusions.(ABSTRACT TRUNCATED AT 250 WORDS)


Assuntos
Ingestão de Alimentos , Leucina/administração & dosagem , Proteínas/metabolismo , Adulto , Dióxido de Carbono/análise , Isótopos de Carbono , Dieta , Jejum , Feminino , Humanos , Infusões Intravenosas , Cinética , Leucina/sangue , Leucina/metabolismo , Masculino , Oxirredução , Biossíntese de Proteínas
17.
Trans R Soc Trop Med Hyg ; 91(2): 116-20, 1997.
Artigo em Inglês | MEDLINE | ID: mdl-9196744

RESUMO

Before the development of pulsed field gel electrophoresis (PFGE), little was known of the chromosomal organization of Trypanosoma brucei. This technique first revealed that the nuclear genome was subdivided into distinct size classes of chromosomes, subsequently shown to have disparate genetic roles in the life cycle of the parasite. PFGE also facilitated the determination of chromosome ploidy and the observation that apparent homologues often differed significantly in size within and between isolates. While the biological reasons underlying this plasticity may prove very interesting, nevertheless it could pose real problems for the global analysis of the T. brucei genome. Therefore, before undertaking large scale physical mapping, it is necessary to determine the number and size of chromosomes in the reference stock; to compare these to the chromosomes of other stocks to determine the relative sizes of homologues; and to investigate the deoxyribonucleic acid content of the size of polymorphic regions in order to assess how these may affect the execution of a physical mapping programme.


Assuntos
Mapeamento Cromossômico , Genoma de Protozoário , Polimorfismo Genético , Trypanosoma brucei brucei/genética , Animais , Sondas de DNA , Bases de Dados Factuais , Eletroforese em Gel de Campo Pulsado , Cariotipagem , Hibridização de Ácido Nucleico , Recombinação Genética , Mapeamento por Restrição
18.
Acad Med ; 71(12): 1350-2, 1996 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-9114896

RESUMO

PURPOSE: To examine the educational linkages between medical schools and public health agencies (PHAs); characterize programs for medical student placement at PHAs; explore attitudes toward using PHAs as student teaching sites; and investigate factors that facilitate or hinder such placements. METHOD: A 20-item questionnaire was mailed in the summer of 1994 to all 134 allopathic medical schools in the United States (for schools with more than one campus, each campus was counted as a separate school). The chi-square and Mann-Whitney U tests were used to assess associations between variables. RESULTS: A total of 108 schools (81%) responded. Of these, 68 (63%) reported having a program that places some or all students at PHAs. The most common facilitating factors were proximity of PHA(s) (84%), faculty interest in public health (76%), support of the PHA director and personnel (67%), and faculty appointments for public health personnel (63%). Two barriers differentiated schools having a PHA placement program from those not having one: lack of faculty interest (p = .001) and lack of a designated PHA contact person (p = .002). CONCLUSION: An unexpectedly large number of schools placed students in PHAs to receive training. However, medical schools are not utilizing the full potential of PHAs as teaching sites.


Assuntos
Estágio Clínico , Preceptoria , Saúde Pública , Faculdades de Medicina , Coleta de Dados , Órgãos Governamentais , Relações Interinstitucionais , Saúde Pública/educação , Estados Unidos
19.
Health Educ Behav ; 26(5): 714-33, 1999 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-10533175

RESUMO

To inform intervention development in a multisite randomized community trial, the Rapid Early Action for Coronary Treatment (REACT) project formative research was undertaken for the purpose of investigating the knowledge, beliefs, perceptions, and usual practice of health care professionals. A total of 24 key informant interviews of cardiologists and emergency physicians and 15 focus groups (91 participants) were conducted in five major geographic regions: Northeast, Northwest, Southeast, Southwest, and Midwest. Transcript analyses revealed that clinicians are somewhat unaware of the empirical evidence related to the problem of patient delay, are concerned about the practice constraints they face, and would benefit from concrete suggestions about how to improve patient education and encourage fast action. Findings provide guidance for selection of educational strategies and messages for health providers as well as patients and the public.


Assuntos
Atitude do Pessoal de Saúde , Educação em Saúde , Conhecimentos, Atitudes e Prática em Saúde , Infarto do Miocárdio/terapia , Padrões de Prática Médica , Idoso , Cardiologia , Serviço Hospitalar de Emergência , Feminino , Grupos Focais , Humanos , Masculino , Pessoa de Meia-Idade , Enfermagem , Atenção Primária à Saúde , Fatores de Tempo , Estados Unidos
20.
Scott Med J ; 33(1): 203-4, 1988 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-3387998

RESUMO

In post-absorptive man, energy is derived solely from oxidation of body stores, mainly by oxidation of fat rather than glycogen. Eating changes this pattern so that carbohydrate (CHO) oxidation predominates. If during feeding energy intake exceeds energy expenditure, the energy needs of the whole body can in theory be met entirely from the diet. However, it is not clear whether the CHO utilised in the fed state does come directly from the absorbed diet, or whether some continues to be removed from body stores.


Assuntos
Metabolismo dos Carboidratos , Carboidratos da Dieta/metabolismo , Metabolismo Energético , Adulto , Isótopos de Carbono , Feminino , Humanos , Masculino , Oxirredução , Valores de Referência
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