Detalhe da pesquisa
1.
Clades of huge phages from across Earth's ecosystems.
Nature
; 578(7795): 425-431, 2020 02.
Artigo
em Inglês
| MEDLINE | ID: mdl-32051592
2.
ARGprofiler-a pipeline for large-scale analysis of antimicrobial resistance genes and their flanking regions in metagenomic datasets.
Bioinformatics
; 40(3)2024 Mar 04.
Artigo
em Inglês
| MEDLINE | ID: mdl-38377397
3.
A curated data resource of 214K metagenomes for characterization of the global antimicrobial resistome.
PLoS Biol
; 20(9): e3001792, 2022 09.
Artigo
em Inglês
| MEDLINE | ID: mdl-36067158
4.
MAGICIAN: MAG simulation for investigating criteria for bioinformatic analysis.
BMC Genomics
; 25(1): 55, 2024 Jan 12.
Artigo
em Inglês
| MEDLINE | ID: mdl-38216924
5.
Extended-spectrum beta-lactamase-producing Escherichia coli and antimicrobial resistance in municipal and hospital wastewaters in Czech Republic: Culture-based and metagenomic approaches.
Environ Res
; 193: 110487, 2021 02.
Artigo
em Inglês
| MEDLINE | ID: mdl-33232750
6.
Associations between antimicrobial use and the faecal resistome on broiler farms from nine European countries.
J Antimicrob Chemother
; 74(9): 2596-2604, 2019 09 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-31199864
7.
The antimicrobial resistome in relation to antimicrobial use and biosecurity in pig farming, a metagenome-wide association study in nine European countries.
J Antimicrob Chemother
; 74(4): 865-876, 2019 04 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-30649386
8.
A sampling and metagenomic sequencing-based methodology for monitoring antimicrobial resistance in swine herds.
J Antimicrob Chemother
; 72(2): 385-392, 2017 02.
Artigo
em Inglês
| MEDLINE | ID: mdl-28115502
9.
Flankophile: a bioinformatic pipeline for prokaryotic genomic synteny analysis.
Microbiol Spectr
; 12(1): e0241323, 2024 Jan 11.
Artigo
em Inglês
| MEDLINE | ID: mdl-38084973
10.
The European livestock resistome.
mSystems
; 9(4): e0132823, 2024 Apr 16.
Artigo
em Inglês
| MEDLINE | ID: mdl-38501800
11.
Detection of specific uncultured bacteriophages by fluorescence in situ hybridisation in pig microbiome.
PLoS One
; 18(3): e0283676, 2023.
Artigo
em Inglês
| MEDLINE | ID: mdl-36996123
12.
Association of health, nutrition, and socioeconomic variables with global antimicrobial resistance: a modelling study.
Lancet Planet Health
; 7(11): e888-e899, 2023 11.
Artigo
em Inglês
| MEDLINE | ID: mdl-37940209
13.
Global within-species phylogenetics of sewage microbes suggest that local adaptation shapes geographical bacterial clustering.
Commun Biol
; 6(1): 700, 2023 07 08.
Artigo
em Inglês
| MEDLINE | ID: mdl-37422584
14.
Global Distribution of mcr Gene Variants in 214K Metagenomic Samples.
mSystems
; 7(2): e0010522, 2022 04 26.
Artigo
em Inglês
| MEDLINE | ID: mdl-35343801
15.
SourceFinder: a Machine-Learning-Based Tool for Identification of Chromosomal, Plasmid, and Bacteriophage Sequences from Assemblies.
Microbiol Spectr
; 10(6): e0264122, 2022 12 21.
Artigo
em Inglês
| MEDLINE | ID: mdl-36377945
16.
PlasmidHostFinder: Prediction of Plasmid Hosts Using Random Forest.
mSystems
; 7(2): e0118021, 2022 04 26.
Artigo
em Inglês
| MEDLINE | ID: mdl-35382558
17.
Genomic analysis of sewage from 101 countries reveals global landscape of antimicrobial resistance.
Nat Commun
; 13(1): 7251, 2022 12 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-36456547
18.
Metagenomic DNA sequencing for semi-quantitative pathogen detection from urine: a prospective, laboratory-based, proof-of-concept study.
Lancet Microbe
; 3(8): e588-e597, 2022 08.
Artigo
em Inglês
| MEDLINE | ID: mdl-35688170
19.
Robustness in quantifying the abundance of antimicrobial resistance genes in pooled faeces samples from batches of slaughter pigs using metagenomics analysis.
J Glob Antimicrob Resist
; 24: 398-402, 2021 03.
Artigo
em Inglês
| MEDLINE | ID: mdl-33626417
20.
Patterns of Gene Content and Co-occurrence Constrain the Evolutionary Path toward Animal Association in Candidate Phyla Radiation Bacteria.
mBio
; 12(4): e0052121, 2021 08 31.
Artigo
em Inglês
| MEDLINE | ID: mdl-34253055