Global patterns in endemicity and vulnerability of soil fungi.

Fungi are highly diverse organisms, which provide multiple ecosystem services. However, compared with charismatic animals and plants, the distribution patterns and conservation needs of fungi have been little explored. Here, we examined endemicity patterns, global change vulnerability and conservation priority areas for functional groups of soil fungi based on six global surveys using a high-resolution, long-read metabarcoding approach. We found that the endemicity of all fungi and most functional groups peaks in tropical habitats, including Amazonia, Yucatan, West-Central Africa, Sri Lanka, and New Caledonia, with a negligible island effect compared with plants and animals. We also found that fungi are predominantly vulnerable to drought, heat and land-cover change, particularly in dry tropical regions with high human population density. Fungal conservation areas of highest priority include herbaceous wetlands, tropical forests, and woodlands. We stress that more attention should be focused on the conservation of fungi, especially root symbiotic arbuscular mycorrhizal and ectomycorrhizal fungi in tropical regions as well as unicellular early-diverging groups and macrofungi in general. Given the low overlap between the endemicity of fungi and macroorganisms, but high conservation needs in both groups, detailed analyses on distribution and conservation requirements are warranted for other microorganisms and soil organisms.

Assessing Biotic and Abiotic Interactions of Microorganisms in Amazonia through Co-Occurrence Networks and DNA Metabarcoding.

Species may co-occur due to responses to similar environmental conditions, biological associations, or simply because of coincident geographical distributions. Disentangling patterns of co-occurrence and potential biotic and abiotic interactions is crucial to understand ecosystem function. Here, we used DNA metabarcoding data from litter and mineral soils collected from a longitudinal transect in Amazonia to explore patterns of co-occurrence. We compared data from different Amazonian habitat types, each with a characteristic biota and environmental conditions. These included non-flooded rainforests (terra-firme), forests seasonally flooded by fertile white waters (várzeas) or by unfertile black waters (igapós), and open areas associated with white sand soil (campinas). We ran co-occurrence network analyses based on null models and Spearman correlation for all samples and for each habitat separately. We found that one third of all operational taxonomic units (OTUs) were bacteria and two thirds were eukaryotes. The resulting networks were nevertheless mostly composed of bacteria, with fewer fungi, protists, and metazoans. Considering the functional traits of the OTUs, there is a combination of metabolism modes including respiration and fermentation for bacteria, and a high frequency of saprotrophic fungi (those that feed on dead organic matter), indicating a high turnover of organic material. The organic carbon and base saturation indices were important in the co-occurrences in Amazonian networks, whereas several other soil properties were important for the co-exclusion. Different habitats had similar network properties with some variation in terms of modularity, probably associated with flooding pulse. We show that Amazonian microorganism communities form highly interconnected co-occurrence and co-exclusion networks, which highlights the importance of complex biotic and abiotic interactions in explaining the outstanding biodiversity of the region.

Environmental policy at a critical junction in the Brazilian Amazon.

Wholesale conversion of natural Amazonian ecosystems has been encouraged by Brazil's extreme antienvironmental government, and historical forest loss explains municipal-scale voting prevalence. Embracing a new administration would strengthen local-to-regional governance, suppress illegal land grabbing, deforestation, logging, and gold mining, thereby protecting the world's most species-rich forest domain and ensuring global sustainability.

Potential mammalian species for investigating the past connections between Amazonia and the Atlantic Forest.

Much evidence suggests that Amazonia and the Atlantic Forest were connected through at least three dispersion routes in the past: the Eastern route, the central route, and the Western route. However, few studies have assessed the use of these routes based on multiple species. Here we present a compilation of mammal species that potentially have dispersed between the two forest regions and which may serve to investigate these connections. We evaluate the present-day geographic distributions of mammals occurring in both Amazonia and the Atlantic Forest and the likely connective routes between these forests. We classified the species per habitat occupancy (strict forest specialists, species that prefer forest habitat, or generalists) and compiled the genetic data available for each species. We found 127 mammalian species presently occurring in both Amazonia and the Atlantic Forest for which, substantial genetic data was available. Hence, highlighting their potential for phylogeographic studies investigating the past connections between the two forests. Differently from what was previously proposed, the present-day geographic distribution of mammal species found in both Amazonia and the Atlantic Forest points to more species in the eastern portion of the dry diagonal (and adjoining forested habitats). The Central route was associated with the second most species. Although it remains to be seen how this present-day geography reflects the paleo dispersal routes, our results show the potential of using mammal species to investigate and bring new insights about the past connections between Amazonia and the Atlantic Forest.

Metabarcoding advances for ecology and biogeography of Neotropical protists: what do we know, where do we go? / Ecologia e biogeografia de protistas Neotropicais usando metabarcoding: O que sabemos? Para onde iremos?

Abstract: The Neotropics is one of the most diverse regions of the globe in terms of plants and animal species. Regarding the microbial world, however, little is known about the diversity and biogeography patterns of microorganisms in the Neotropics. The biogeography of several microbial taxonomic groups is still missing and/or incomplete, such as the protists. Despite the hard taxonomic identification of protists, the advance of molecular techniques (e.g., metabarcoding) have allowed to better explore the distribution of several protistan groups. Our goal here was to summarize the available information of Neotropical protists, focusing on metabarcoding studies, to explore what these data evidence on their ecology and biogeography. For this, we reviewed the findings from all articles that focused on or included the terrestrial protists using a metabarcoding approach and identified the gaps and future perspectives in this research field. We found that Neotropical protistan diversity patterns seem to be, at least in part, congruent with that of macro-organisms and, different than plants and bacteria, just weakly explained by environmental variables. We argue that studies with standardized protocols including different ecoregions are necessary, such as temperate forests, grasslands, and savannas from Southern of South America and Northern Atlantic Forest, to fully characterize the ecology and biogeography on Neotropical protists. Furthermore, dismembering evolutionary lineages and functional guilds of protists are important to better understand the relationship between diversity, dispersal abilities, and functionality of particular taxa of protists in their habitats.

Resumo: A região Neotropical é uma das mais diversas regiões do globo em termos de espécies vegetais e animais. Em relação ao mundo microbiano, entretanto, pouco se sabe sobre a diversidade e os padrões biogeográficos dos microrganismos no Neotrópico. Nesse contexto, a biogeografia de diversos grupos taxonômicos microbianos ainda é escasso e/ou incompleto como os protistas, devido à difícil identificação taxonômica de tais microscópicos organismos. Neste contexto, o avanço dos dados moleculares de amostras ambientais (por exemplo, metabarcoding) permitiu explorar a distribuição de vários grupos de protistas. Nosso objetivo aqui foi resumir as informações disponíveis dos protistas neotropicais, com foco em metabarcoding, para explorar o que esses dados evidenciam sobre sua ecologia e biogeografia. Para isso, revisamos os resultados de todos os artigos que enfocavam ou incluíam os protistas terrestres usando uma abordagem de metabarcoding e identificamos as lacunas e as perspectivas futuras neste campo de pesquisa. Os padrões de diversidade dos protistas Neotropicais parecem ser, pelo menos em parte, congruentes com os de macroorganismos e, diferentes das plantas e bactérias, sendo pouco explicados por variáveis ambientais. Estudos com protocolos padronizados incluindo diferentes Ecorregiões são necessários, como em florestas temperadas, campos nativos e savanas no sul da América do Sul e no norte da Mata Atlântica, para melhor caracterizar a ecologia e biogeografia de protistas Neotropicais. Além disso, é importante diferenciar linhagens evolutivas e guildas funcionais de protistas para entender melhor a relação entre diversidade, capacidade de dispersão e funcionalidade de determinados táxons de protistas em seus habitats.

Borboletas (Lepidoptera: Hesperioidea e Papilionoidea) de Val de Serra, região central do Rio Grande do Sul, Brasil / Butterflies (Lepidoptera: Papilionoidea) from Val de Serra, central region of Rio Grande do sul state, Brazil

A fauna de borboletas do Bioma Mata Atlântica encontra-se razoavelmente conhecida até o início do limite sul da distribuição do mesmo. No Rio Grande do Sul, entretanto, ainda existem lacunas próximas à região central do estado, cujas áreas florestais são consideradas prioritárias para conservação biológica. Esse trabalho inventariou a assembléia de borboletas de um fragmento de mata ciliar numa região de ecótono entre Floresta Ombrófila Mista e Floresta Estacional Decidual, no município de Itaara. Durante o período de setembro de 2005 a setembro de 2006, num total de 105 horas-rede com uso do método de procura ativa, foram registradas 877 borboletas representando 104 espécies. Com o acréscimo posterior de mais três espécies, a riqueza total elevou-se para 107. As cinco espécies mais abundantes foram os Nymphalidae Hermeuptychia hermes (Fabricius, 1775), Yphthimoides celmis (Godart, [1824]), Agraulis vanillae maculosa (Stichel, [1908]), Tegosa claudina (Eschscholtz, 1821) e Vanessa braziliensis (Moore, 1883). Foram registradas uma nova espécie para o estado e quatro para a região central, além do Papilionidae sulino endêmico Euryades corethrus (Boisduval, 1836) e o Lycaenidae Arcas ducalis (Westwood, 1852), considerado indicador de áreas preservadas de Mata Atlântica. Devido à representatividade da fauna registrada, recomenda-se a necessidade de incrementar os esforços para a conservação da área e estimular novos estudos ecológicos com a biodiversidade local.

The butterfly fauna of the Atlantic Forest Biome is reasonably well-known up to the southern limit of its distribution. However, there are knowledge gaps nearby the central region of Rio Grande do Sul State, whose forest areas are considered priorities for biological conservation. This study investigated the butterfly assemblage of a riparian fragment in an ecotone area between Mixed Ombrophilous Forest and Seasonal Decidous Forest, in Itaara municipality. From September 2005 to September 2006, after 105 net-hours through active search sampling, 877 butterflies were registered representing 104 species. Three more species were registered posteriorly, increasing total richness to 107. The most abundant species were the Nymphalidae Hermeuptychia hermes (Fabricius, 1775), Yphthimoides celmis (Godart, [1824]), Agraulis vanillae maculosa (Stichel, [1908]), Tegosa claudina (Eschscholtz, 1821) and Vanessa braziliensis (Moore, 1883). One new record for the State and four new ones for the central region were registered besides the southern endemic Papilionidae Euryades corethrus (Boisduval, 1836) and the Lycaenidae Arcas ducalis (Westwood, 1852), considered indicator of Atlantic forest preserved areas. Due to the representativeness of the registered fauna, it is suggested the increase of conservation efforts in the area and stimulation of new ecological studies with the local biodiversity.

Borboletas (Lepidoptera: Hesperioidea e Papilionoidea) de fragmentos de Floresta Ombrófila Mista, Rio Grande do Sul, Brasil / Butterflies (Lepidoptera: Hesperioidea and Papilionoidea) from Mixed Ombrophilous Forest fragments, Rio Grande do Sul, Brazil

A paisagem da região dos Campos de Cima da Serra, localizada no Norte do Rio Grande do Sul, encontra-se fragmentada e sua biodiversidade ameaçada devido ao impacto das atividades humanas. Esse trabalho investigou a fauna de borboletas em fragmentos de vegetação nativa (VN) e área antrópica (AA) de Floresta Ombrófila Mista nos municípios de Soledade e Mormaço. Em 108 horas-rede, foram registradas 1.181 borboletas distribuídas em 125 espécies, através de procura ativa com rede entomológica. VN registrou 72 espécies e 470 indivíduos, enquanto AA apresentou 89 e 711, respectivamente. Heliconius erato phyllis (Fabricius, 1775), Biblis hyperia nectanabis (Fruhstorfer, 1909) e Dryas iulia alcionea (Cramer, 1779) foram as três espécies mais abundantes no geral e em AA, enquanto Strephonota elika (Hewitson, 1867), H. erato phyllis e Morpho helenor achillides C. Felder & R. Felder, 1867 foram as mais abundantes em VN. Trinta e três espécies constituem-se em novos registros para a Floresta Ombrófila Mista do Rio Grande do Sul. Os resultados mostram a contribuição de inventários relativamente rápidos de borboletas como fonte de subsídios para conservação de biodiversidade.

The landscape of Campos de Cima da Serra region, at North of Rio Grande do Sul State, is fragmented and its biodiversity threatened due the impact of human activities. This study investigated the butterfly fauna in fragments of Mixed Ombrophilous Forest native vegetation (VN) and anthropic area (AA) at Soledade and Mormaço municipalities. 1,181 butterflies were registered and distributed in 125 species, after 108 net-hours through active search sampling with entomological net. VN registered 72 species and 470 individuals, while AA had 89 and 711, respectively. Heliconius erato phyllis (Fabricius, 1775), Biblis hyperia nectanabis (Fruhstorfer, 1909) and Dryas iulia alcionea (Cramer, 1779) were the three most abundant species in general and in AA, while Strephonota elika (Hewitson, 1867), H. erato phyllis and Morpho helenor achillides C. Felder & R. Felder, 1867 were the most abundant in VN. Thirty-three species are considered new records for Mixed Ombrophilous Forest in Rio Gr ande do Sul State. The results show the contribution of butterfly rapid inventories as source of subsidies to biodiversity conservation.