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Correction for 'Atmospheric chemistry of CF3CN: kinetics and products of reaction with OH radicals, Cl atoms and O3' by Mads Peter Sulbaek Andersen et al., Phys. Chem. Chem. Phys., 2022, 24, 2638-2645, https://doi.org/10.1039/D1CP05288H.
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Correction for 'Atmospheric chemistry of (Z)- and (E)-1,2-dichloroethene: kinetics and mechanisms of the reactions with Cl atoms, OH radicals, and O3' by Mads P. Sulbaek Andersen et al., Phys. Chem. Chem. Phys., 2022, 24, 7356-7373, https://doi.org/10.1039/D1CP04877E.
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Long path length FTIR-smog chamber techniques were used to study the title reactions in 700 Torr of N2, oxygen or air diluent at 296 ± 2 K. Values of k(Cl + CF3CN) = (2.43 ± 0.33) × 10-15 and k(OH + CF3CN) = (4.61 ± 0.34) × 10-15 cm3 molecule-1 s-1 were measured. There was no discernible reaction of CF3CN with O3 and an upper limit of k(O3 + CF3CN) ≤ 7.9 × 10-24 cm3 molecule-1 s-1 was established. The IR spectra of CF3CN and CF3CF2CN are reported. The atmospheric lifetime of CF3CN is determined by the reaction with OH and is approximately 6.9 years. Reaction of CF3CN with Cl atoms in a chamber study gives (Z-) and/or (E-) CF3CClîNCl and CF3C(O)Cl as major primary products. Under environmental conditions, the OH radical initiated oxidation gives COF2 in a yield of (96 ± 8)%. The global warming potential for CF3CN is estimated as 1030 for a 100 year time horizon.
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Smog chambers interfaced with in situ FT-IR detection were used to investigate the kinetics and mechanisms of the Cl atom, OH radical, and O3 initiated oxidation of (Z)- and (E)-1,2-dichloroethene (CHClîCHCl) under atmospheric conditions. Relative and absolute rate methods were used to measure k(Cl + (Z)-CHClîCHCl) = (8.80 ± 1.75) × 10-11, k(Cl + (E)-CHClîCHCl) = (8.51 ± 1.69) × 10-11, k(OH + (Z)-CHClîCHCl) = (2.02 ± 0.43) × 10-12, k(OH + (E)-CHClîCHCl) = (1.94 ± 0.43) × 10-12, k(O3 + (Z)-CHClîCHCl) = (4.50 ± 0.45) × 10-21, and k(O3 + (E)-CHClîCHCl) = (1.02 ± 0.10) × 10-19 cm3 molecule-1 s-1 in 700 Torr of N2/air diluent at 298 ± 2 K. Pressure dependencies for the Cl atom reaction kinetics were observed for both isomers, consistent with isomerization occurring via Cl atom elimination from the chemically activated CHCl-CHCl-Cl adduct. The observed products from Cl initiated oxidation were HC(O)Cl (117-133%), CHCl2CHO (29-30%), and the corresponding CHClîCHCl isomer (11-20%). OH radical initiated oxidation gives HC(O)Cl as a major product. For reaction of OH with (E)-CHClîCHCl, (Z)-CHClîCHCl was also observed as a product. A significant chlorine atom elimination channel was observed experimentally (HCl yield) and supported by computational results. Photochemical ozone creation potentials of 12 and 11 were estimated for (Z)- and (E)-CHClîCHCl, respectively. Finally, an empirical kinetic relationship is explored for the addition of OH radicals or Cl atoms to small alkenes. The results are discussed in the context of the atmospheric chemistry of (Z)- and (E)-CHClîCHCl.
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Polymorphic salts of trans-1,2-bis(4-pyridyl)ethylene (bpe), 2[bpeH2 ] â (SO4 )(2HSO4 ) (1) and [bpeH2 ] â 2HSO4 (2) have been synthesized and their structures determined by X-ray crystallography. The Schmidt postulate predicts that neither of the salts will give rise to photodimerization so they can both potentially be applied as green light emitters. Despite the predictions, 1 undergoes a stereospecific solid-state photodimerization reaction with 100 % yield. This is due to UV induced combination of sliding and pedal-like movement of the pyridyl ring system that influences the alignment of C=C bonds. The sliding motion is restricted in 2. Consequently, the green emission from 1 is completely quenched after photodimerization. It is evident that counter ions play a dominant role in dis- and enabling photodimerization; their degree of protonization and lattice placement are important solvent controlled design parameters towards crystal structures that can act as future light emitters.
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Symmetry effects in internal conversion are studied by means of two isomeric cyclic tertiary aliphatic amines in a velocity map imaging (VMI) experiment on the femtosecond timescale. It is demonstrated that there is a delicate structural dependence on when coherence is preserved after the transition between the 3p and 3s Rydberg states. N-Methyl morpholine (NMM) shows unambiguous preserved coherence, consistent with previous work, which is decidedly switched off by the repositioning of oxygen within the ring. From the differences in these dynamics, and an examination of the potential energy surface following the normal modes of vibration, it becomes clear that there is a striking dependence on atom substitution, which manifests itself in the permitted modes of vibration that take the system out of the Franck-Condon region through to the 3s minimum. It is shown that the non Fermi-like behaviour of NMM is due to a conical intersection (CI) between the 3px and 3s states lying directly along the symmetry allowed path of steepest descent out of the Franck-Condon region. NMI, where the symmetry has been changed, is shown to undergo internal conversion in a more Fermi-like manner as the energy spreads through the available modes ergodically.
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The loss of a Cl atom from metastable CH2Cl2+ in the mass-analyzed ion kinetic energy experiment is characterized by a borderline zero kinetic energy release and large kinetic isotope effects on chlorine and hydrogen. Ab initio calculations are employed to assist the interpretation in terms of a nonadiabatic reaction involving electronic predissociation of the electronically excited state 2A1 and two-dimensional reaction dynamics. Strong curvature in the reaction coordinate leads to a bobsled effect that accounts for the low kinetic energy release. The kinetic isotope effects enter via the predissociation rate and are interpreted in terms of vibrational overlap integrals.
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Time-resolved photoelectron spectroscopy in combination with ab initio quantum chemistry calculations was used to study ultrafast excited state dynamics in formamide (FOR), N,N-dimethylformamide (DMF), and N,N-dimethylacetamide (DMA) following 160 nm excitation. The particular focus was on internal conversion processes within the excited state Rydberg manifold and on how this behavior in amides compared with previous observations in small amines. All three amides exhibited extremely rapid (<100 fs) evolution from the Franck-Condon region. We argue that this is then followed by dissociation. Our calculations indicate subtle differences in how the excited state dynamics are mediated in DMA/DMF as compared to FOR. We suggest that future studies employing longer pump laser wavelengths will be useful for discerning these differences.
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Sulfur substitution of carbonyl oxygen atoms of DNA/RNA nucleobases promotes ultrafast intersystem crossing and near-unity triplet yields that are being used for photodynamic therapy and structural-biology applications. Replacement of sulfur with selenium or tellurium should significantly red-shift the absorption spectra of the nucleobases without sacrificing the high triplet yields. Consequently, selenium/tellurium-substituted nucleobases are thought to facilitate treatment of deeper tissue carcinomas relative to the sulfur-substituted analogues, but their photodynamics are yet unexplored. In this contribution, the photochemical relaxation mechanism of 6-selenoguanine is elucidated and compared to that of the 6-thioguanine prodrug. Selenium substitution leads to a remarkable enhancement of the intersystem crossing lifetime both to and from the triplet manifold, resulting in an efficiently populated, yet short-lived triplet state. Surprisingly, the rate of triplet decay in 6-selenoguanine increases by 835-fold compared to that in 6-thioguanine. This appears to be an extreme manifestation of the classical heavy-atom effect in organic photochemistry, which challenges conventional wisdom.
Assuntos
DNA/química , Guanina/análogos & derivados , Compostos Organosselênicos/química , RNA/química , Selênio/química , Enxofre/química , Tioguanina/química , Guanina/química , FotoquimioterapiaRESUMO
We investigate the ultrafast photoinduced dynamics of the cyclic disulfide 1,2-dithiane upon 200â nm excitation by time-resolved photoelectron spectroscopy and show that the S-S bond breaks on an ultrafast time scale. This stands in stark contrast to excitation at longer wavelengths where the initially excited S1 state evolves as the wavepacket is guided towards a conical intersection with S0 by a torsional motion involving a partially broken bond between the sulfur atoms. This process at lower excitation energy allows for efficient (re-)population of S0 , rendering dithiane intact. At 200â nm, in contrast, the excitation leads to a manifold of higher excited states, Sn , that are primarily of Rydberg character. We are able to follow the gradual transition from the initially excited state to the dissociative receiver state in real time. The Rydberg states are intersected by a repulsive valence state that mediates a transition to the repulsive S2 surface. Therefore, we propose that the resulting diradical will eventually break apart on a longer timescale. The findings imply that upon going from UV-B to UV-C light the structural integrity of the disulfide moiety is compromised and proteins irradiated in this range will not be able to reform the initial tertiary structure, leading to loss of function.
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The thermally induced OBn â SBn and OBn â SeBn migration reactions facilitate the rearrangement of O-benzyl thio- and selenocarbamates [BnOC(âX)NMe2] (X = S or Se) into their corresponding S-benzyl thio- and Se-benzyl selenocarbamates [BnXC(âO)NMe2] (X = S or Se). A series of substituted O-benzyl thio- and selenocarbamates were synthesized and rearranged in good yields of 33-88%. The reaction rates are higher for substrates with electron-donating groups in the 2 or 4 position of the aromatic ring, but the rearrangement also proceeds with electron-withdrawing substituents. The rearrangement follows first-order reaction kinetics and proceeds via a tight ion pair intermediate consisting of the benzylic carbocation and the thio- or selenocarbamate moiety. Computational studies support these findings.
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The discovery that the Newman-Kwart rearrangement can be performed at room temperature by action of a simple and readily available oxidant, cerium ammonium nitrate, is described. The conditions give clean conversion when using electron-rich aromatic substrates, and the reactions are often quantitative. Computational studies support a reaction mechanism where the O-thiocarbamate is first oxidized to the radical cation, followed by nucleophilic attack by the ipso carbon of the aromatic system.
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Bithiophenes serve as model systems for larger polythiophenes used in solar cell applications and molecular electronics. We report a study of ultrafast dynamics of two bithiophene systems measured with femtosecond time-resolved photoelectron spectroscopy, and show that their intersystem crossing takes place within the first few picoseconds after excitation, in line with previous studies. We show that the intersystem crossing rate can be explained in terms of arguments based on symmetry of the S1 minimum energy geometry, which depends on the specific conformation of bithiophene. Furthermore, this work shows that the minor cis-conformer contributes to an even higher intersystem crossing rate than the major trans conformer. The work presented here can provide guiding principles towards the design of solar cell components with even faster formation of long-lived excited states for solar energy harvesting.
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The chemical mechanisms of the OH radical, Cl-atom and O3 initiated oxidation of (Z)-CF3CH[double bond, length as m-dash]CHCl were studied at 296 ± 1 K in 10-700 Torr air of N2/O2 diluent. Cl atoms add to the [double bond splayed left]C[double bond, length as m-dash]C[double bond splayed right] double bond: 12 ± 5% to the terminal carbon and 85 ± 5% to the central carbon. In 700 Torr of air the products are CF3CHClCHO, HCOCl, CF3COCl, CF3CHO, (E)-CF3CH[double bond, length as m-dash]CHCl, CF3C(O)CHCl2, and CF3CHClCOCl. The yield of (E) isomer was dependent on total pressure, but independent of O2 partial pressure; consistent with isomerization occurring via Cl atom elimination from the chemically activated rather than the thermalized CF3CHCHCl-Cl adduct. The rate constant for (Z)-CF3CH[double bond, length as m-dash]CHCl + Cl was measured at low pressure (10-15 Torr) and found to be indistinguishable from that determined at 700 Torr total pressure, whereas the low pressure rate constant for (E)-CF3CH[double bond, length as m-dash]CHCl was 36% smaller. G4MP2 ab initio calculations showed that the (E) isomer is 1.2 kcal mol-1 more stable than the (Z) isomer. Cl atom elimination from the adduct will preferentially form the (E) isomer and hence the rate of CF3CH[double bond, length as m-dash]CHCl loss will be more sensitive to pressure for the (Z) than the (E) isomer. Reaction of (Z)-CF3CH[double bond, length as m-dash]CHCl with OH radicals gives CF3CHO, HCOCl, (E)-CF3CH[double bond, length as m-dash]CHCl, and HCl. A significant chlorine atom elimination channel was observed experimentally, and supported by computational results. The oxidation products of the reaction of O3 with (Z)- and (E)-CF3CH[double bond, length as m-dash]CHCl were determined with no evidence of isomerization. The results are discussed with respect to the atmospheric chemistry and environmental impact of (Z)- and (E)-CF3CH[double bond, length as m-dash]CHCl.
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Hybrid molecules involving subphthalocyanine and Buckminsterfullerene derivatives are interesting candidates as heavy metal free triplet sensitizers. Subphthalocyanine efficiently absorbs visible photons and transfer the singlet excited state energy to the Buckminsterfullerene where intersystem crossing produces triplet states in high yield. Thus, far the efficiency of the triplet-generating photophysics in these systems has been hampered by back energy transfer to the subphthalocyanine triplet state resulting in loss of excitation energy. Herein an efficient strategy is realized to avoid loss of triplet energy by back energy transfer. A hybrid molecule based on subphthalocyanine and Buckminsterfullerene is presented in which dispersion-induced π-π interactions result in a molecular geometry where highly efficient through-space singlet excited state energy transfer takes place in one direction, whereas energy flow in the opposite direction via the triplet manifold is blocked by lack of orbital overlap. The approach opens for a new class of heavy-metal-free triplet sensitizers of particular relevance to the fields of photodynamic therapy and noncoherent photon upconversion.
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The vacuum-ultraviolet photoinduced dynamics of cyclopropane (C3H6) were studied using time-resolved photoelectron spectroscopy (TRPES) in conjunction with ab initio quantum dynamics simulations. Following excitation at 160.8 nm, and subsequent probing via photoionization at 266.45 nm, the initially prepared wave packet is found to exhibit a fast decay (<100 fs) that is attributed to the rapid dissociation of C3H6 to ethylene (C2H4) and methylene (CH2). The photodissociation process proceeds via concerted ring opening and C-C bond cleavage in the excited state. Ab initio multiple spawning simulations indicate that ring-opening occurs prior to dissociation. The dynamics simulations were subsequently employed to simulate a TRPES spectrum, which was found to be in excellent agreement with the experimental result. On the basis of this agreement, the fitted time constants of 35 ± 20 and 57 ± 35 fs were assigned to prompt (i) dissociation on the lowest-lying excited state, prepared directly by the pump pulse, and (ii) non-adiabatic relaxation from higher-lying excited states that lead to delayed dissociation, respectively.
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We introduce bis-aryl croconamides as a new member in the family of dual hydrogen bonding anion receptors. In this study a series of croconamides are synthesised, and the selectivity for anion binding is investigated (Cl- > Br- > I- in CH2Cl2). The croconamides exhibit different structures in the crystal phase depending on the substituents on the aromatic rings, and furthermore, the crystal structure revealed the presence of tautomers. DFT calculations elucidated the complex structures formed upon addition of anion to the croconamides, confirming the order of association constants towards the halogen anions. The use of croconamides as organocatalysts in a proof-of-concept study is demonstrated in the formation of THP ethers. In addition to this, construction of a Hammet plot further elucidates the mechanism in action on formation of THP ethers.
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Light harvesting via energy storage in azobenzene has been a key topic for decades and the process of energy distribution over the molecular degrees of freedom following photoexcitation remains to be understood. Dynamics of a photoexcited system can exhibit high degrees of nonergodicity when it is driven by just a few degrees of freedom. Typically, an internal conversion leads to the loss of such localization of dynamics as the intramolecular energy becomes statistically redistributed over all molecular degrees of freedom. Here, we present a unique case where the excitation energy remains localized even subsequent to internal conversion. Strong-field ionization is used to prepare cis- and trans-azobenzene radical cations on the D1 surface with little excess energy at the equilibrium neutral geometry. These D1 ions are preferably formed because in this case D1 and D0 switch place in the presence of the strong laser field. The postionization dynamics are dictated by the potential energy landscape. The D1 surface is steep downhill along the cis/trans isomerization coordinate and toward a common minimum shared by the two isomers in the region of D1/D0 conical intersection. Coherent cis/trans torsional motion along this coordinate is manifested in the ion transients by a cosine modulation. In this scenario, D0 becomes populated with molecules that are energized mainly along the cis-trans isomerization coordinate, with the kinetic energy above the cis-trans interconversion barrier. These activated azobenzene molecules easily cycle back and forth along the D0 surface and give rise to several periods of modulated signal before coherence is lost. This persistent localization of the internal energy during internal conversion is provided by the steep downhill potential energy surface, small initial internal energy content, and a strong hole-lone pair interaction that drives the molecule along the cis-trans isomerization coordinate to facilitate the transition between the involved electronic states.
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The atmospheric fates of Z- and E-CF3CH[double bond, length as m-dash]CHCF3 have been studied, investigating the kinetics and the products of the reactions of the two compounds with Cl atoms, OH radicals, OD radicals, and O3. FTIR smog chamber experiments measured: k(Cl + Z-CF3CH[double bond, length as m-dash]CHCF3) = (2.59 ± 0.47) × 10-11, k(Cl + E-CF3CH[double bond, length as m-dash]CHCF3) = (1.36 ± 0.27) × 10-11, k(OH + Z-CF3CH[double bond, length as m-dash]CHCF3) = (4.21 ± 0.62) × 10-13, k(OH + E-CF3CH[double bond, length as m-dash]CHCF3) = (1.72 ± 0.42) × 10-13, k(OD + Z-CF3CH[double bond, length as m-dash]CHCF3) = (6.94 ± 1.25) × 10-13, k(OD + E-CF3CH[double bond, length as m-dash]CHCF3) = (5.61 ± 0.98) × 10-13, k(O3 + Z-CF3CH[double bond, length as m-dash]CHCF3) = (6.25 ± 0.70) × 10-22, and k(O3 + E-CF3CH[double bond, length as m-dash]CHCF3) = (4.14 ± 0.42) × 10-22 cm3 molecule-1 s-1 in 700 Torr of air/N2/O2 diluents at 296 ± 2 K. E-CF3CH[double bond, length as m-dash]CHCF3 reacts with Cl atoms to give CF3CHClC(O)CF3 in a yield indistinguishable from 100%. Z-CF3CH[double bond, length as m-dash]CHCF3 reacts with Cl atoms to give (95 ± 10)% CF3CHClC(O)CF3 and (7 ± 1)% E-CF3CH[double bond, length as m-dash]CHCF3. CF3CHClC(O)CF3 reacts with Cl atoms to give the secondary product CF3C(O)Cl in a yield indistinguishable from 100%, with the observed co-products C(O)F2 and CF3O3CF3. The main atmospheric fate for Z- and E-CF3CH[double bond, length as m-dash]CHCF3 is reaction with OH radicals. The atmospheric lifetimes of Z- and E-CF3CH[double bond, length as m-dash]CHCF3 are estimated as 27 and 67 days, respectively. IR absorption cross sections are reported and the global warming potentials (GWPs) of Z- and E-CF3CH[double bond, length as m-dash]CHCF3 for the 100 year time horizon are calculated to be GWP100 = 2 and 7, respectively. This study provides a comprehensive description of the atmospheric fate and impact of Z- and E-CF3CH[double bond, length as m-dash]CHCF3.
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The non-adiabatic relaxation dynamics of the tertiary cage-amine azabicyclo[2.2.2]octane (ABCO, also known as quinuclidine) have been investigated following 3p Rydberg excitation at 201 nm using femtosecond time-resolved photoelectron imaging (TRPEI). The aim of the study was to investigate the influence of the rigid and symmetric cage structure found in ABCO on the general non-adiabatic relaxation processes commonly seen in other tertiary aliphatic amines (TAAs). Our data is compared with TRPEI results very recently obtained for several structurally less rigid TAA systems [J. O. F. Thompson et al., Chem. Sci., 2016, 7, 1826-1839] and helps to confirm many of the previously reported findings. The experimental results for ABCO in the short-time (<1 ps) regime strongly support earlier conclusions suggesting that planarization about the N-atom is not a prerequisite for efficient 3p-3s internal conversion. Additionally, individual photoelectron peaks within our ABCO data show no temporal shifts in energy. As confirmed by our supporting quantum mechanical calculations, this demonstrates that neither internal conversion within the 3p manifold or significant conformational re-organization are possible in the ABCO system. This result therefore lends strong additional support to the active presence of such dynamical effects in other, less conformationally restricted TAA species, where photoelectron peak shifts are commonly observed. Finally, the extremely long (>1 ns) 3s Rydberg state lifetime seen in ABCO (relative to other TAA systems at similar excitation energies) serves to illustrate the large influence of symmetry and conformational rigidity on intramolecular vibrational redistribution processes previously implicated in mediating this aspect of the overall relaxation dynamics.