Effects of the Intramolecular Group and Solvent on Vibrational Coupling Modes and Strengths of Fermi Resonances in Aryl Azides: A DFT Study of 4-Azidotoluene and 4-Azido-N-phenylmaleimide.

The high transition dipole strength of the azide asymmetric stretch makes aryl azides good candidates as vibrational probes (VPs). However, aryl azides have complex absorption profiles due to Fermi resonances (FRs). Understanding the origin and the vibrational modes involved in FRs of aryl azides is critically important toward developing them as VPs for studies of protein structures and structural changes in response to their surroundings. As such, we studied vibrational couplings in 4-azidotoluene and 4-azido-N-phenylmaleimide in two solvents, N,N-dimethylacetamide and tetrahydrofuran, to explore the origin and the effects of intramolecular group and solvent on the FRs of aryl azides using density functional theory (DFT) calculations with the B3LYP functional and seven basis sets, 6-31G(d,p), 6-31+G(d,p), 6-31++G(d,p), 6-311G(d,p), 6-311+G(d,p), 6-311++G(d,p), and 6-311++G(df,pd). Two combination bands consisting of the azide symmetric stretch and another mode form strong FRs with the azide asymmetric stretch for both molecules. The FR profile was altered by replacing the methyl group with maleimide. Solvents change the relative peak position and intensity more significantly for 4-azido-N-phenylmaleimide, which makes it a more sensitive VP. Furthermore, the DFT results indicate that a comparison among the results from different basis sets can be used as a means to predict more reliable vibrational spectra.

Chromium(III) Bis-Arylterpyridyl Complexes with Enhanced Visible Absorption via Incorporation of Intraligand Charge-Transfer Transitions.

A series of chromium(III) bis-arylterpyridyl complexes containing intraligand charge-transfer (ILCT) excited states were prepared and characterized. These complexes show significant absorption in the visible region due to the ILCT bands. The ILCT bands are tunable across the UV and visible spectrum via incorporation of electron-withdrawing and electron-donating groups on the aryl ring. The absorption of Cr(4'-(4-methoxyphenyl)-2,2':6',2″-terpyridine)23+ (4) in particular is much stronger in the visible region (ε = 11 900 M-1 cm-1 at 450 nm and ε = 5090 M-1 cm-1 at 500 nm) than that of the parent complex Cr(tpy)23+ (tpy = 2,2':6',2″-terpyridine; ε = 2160 M-1 cm-1 at 450 nm, and ε = 170 M-1 cm-1 at 500 nm). Emission experiments on this series reveal Cr(III)-based phosphorescence with lifetimes from 140 to 600 ns upon excitation into the ILCT bands, which indicates funneling of the excitation energy from ligand-localized excited states to Cr(III)-based excited states. Cyclic voltammograms exhibit at least three reversible ligand-based reductions. The first reduction shows shifts of up to -160 mV compared to Cr(tpy)23+. The excited-state reduction potential of these complexes ranges from +0.95 to +1.04 V vs the ferrocene/ferrocenium couple, making them potent photooxidants.

The "Best Catalyst" for Water Oxidation Depends on the Oxidation Method Employed: A Case Study of Manganese Oxides.

Manganese oxides are a highly promising class of water-oxidation catalysts (WOCs), but the optimal MnOx formulation or polymorph is not clear from previous reports in the literature. A complication not limited to MnOx-based WOCs is that such catalysts are routinely evaluated by different methods, ranging from the use of a chemical oxidant such as Ce(4+), photoactive mediators such as [Ru(bpy)3](2+), or electrochemical techniques. Here, we report a systematic study of nine crystalline MnOx materials as WOCs and show that the identity of the "best" catalyst changes, depending on the oxidation method used to probe the catalytic activity.

Characterizing Biogenic MnOx Produced by Pseudomonas putida MnB1 and Its Catalytic Activity towards Water Oxidation.

Mn-oxidizing microorganisms oxidize environmental Mn(II), producing Mn(IV) oxides. Pseudomonas putida MnB1 is a widely studied organism for the oxidation of manganese(II) to manganese(IV) by a multi-copper oxidase. The biogenic manganese oxides (BMOs) produced by MnB1 and similar organisms have unique properties compared to non-biological manganese oxides. Along with an amorphous, poorly crystalline structure, previous studies have indicated that BMOs have high surface areas and high reactivities. It is also known that abiotic Mn oxides promote oxidation of organics and have been studied for their water oxidation catalytic function. MnB1 was grown and maintained and subsequently transferred to culturing media containing manganese(II) salts to observe the oxidation of manganese(II) to manganese(IV). The structures and compositions of these manganese(IV) oxides were characterized using scanning electron microscopy, energy dispersive X-ray spectroscopy, inductively coupled plasma optical emission spectroscopy, and powder X-ray diffraction, and their properties were assessed regarding catalytic functionality towards water oxidation in comparison to abiotic acid birnessite. Water oxidation was accomplished through the whole-cell catalysis of MnB1, the results for which compare favorably to the water-oxidizing ability of abiotic Mn(IV) oxides.

Correction: Morales et al. Characterizing Biogenic MnOx Produced by Pseudomonas putida MnB1 and Its Catalytic Activity towards Water Oxidation. Life 2024, 14, 171.

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Oxidation-potential tuning of tungsten-alkylidyne complexes over a 2 V range.

The electrochemistry and electronic structures of over 30 tungsten-alkylidyne compounds of the form W(CR)L(n)L'(4-n)X (R = H, Bu(t), Ph, p-C6H4CCH, p-C6H4CCSiPr(i)3; X = F, Cl, Br, I, OTf, Bu(n), CN, OSiMe3, OPh; L/L' = PMe3, 1/2 dmpe, 1/2 depe, 1/2 dppe, 1/2 tmeda, P(OMe)3, CO, CNBu(t), py), in which the alkylidyne R group and L and X ligands are systematically varied, have been investigated using cyclic voltammetry and density functional theory calculations in order to determine the extent to which the oxidation potential may be tuned and its dependence on the nature of the metal-ligand interactions. The first oxidation potentials are found to span a range of ∼2 V. Symmetry considerations and the electronic-structure calculations indicate that the highest occupied molecular orbital (and redox orbital) is of principal d(xy) orbital parentage for most of the compounds in this series. The dependence of the oxidation potential on ligand is a strong function of the symmetry relationship between the substituent and the d(xy) orbital, being much more sensitive to the nature of the equatorial L ligands (π symmetry, with respect to d(xy), ΔE1/2 ≅ 0.5 V/L) than to the axial CR and X ligands (nonbonding with respect to d(xy), ΔE(1/2) < 0.3 V/L). The oxidation potential is linearly correlated with the calculated d(xy) orbital energy (slope ≅ 1, R(2) = 0.97), which thus provides a convenient computational descriptor for the potential. The strength of the correlation and slope of unity are proposed to be manifestations of the small inner-sphere reorganization energy associated with one-electron oxidation.

Buffer Effects in Zirconium-Based UiO Metal-Organic Frameworks (MOFs) That Influence Enzyme Immobilization and Catalytic Activity in Enzyme/MOF Biocatalysts.

Novel biocatalysts that feature enzymes immobilized onto solid supports have recently become a major research focus in an effort to create more sustainable and greener chemistries in catalysis. Many of these novel biocatalyst systems feature enzymes immobilized onto metal-organic frameworks (MOFs), which have been shown to increase enzyme activity, stability, and recyclability in industrial processes. While the strategies used for immobilizing enzymes onto MOFs can vary, the conditions always require a buffer to maintain the functionality of the enzymes during immobilization. This report brings attention to critical buffer effects important to consider when developing enzyme/MOF biocatalysts, specifically for buffering systems containing phosphate ions. A comparative analysis of different enzyme/MOF biocatalysts featuring horseradish peroxidase and/or glucose oxidase immobilized onto the MOFs UiO-66, UiO-66-NH2, and UiO-67 using a noncoordinate buffering system (MOPSO buffer) and a phosphate buffering system (PBS) show that phosphate ions can have an inhibitory effect. Previous studies utilizing phosphate buffers for enzyme immobilization onto MOFs have shown Fourier transform infrared (FT-IR) spectra that have been assigned stretching frequencies associated with enzymes after immobilization. Analyses and characterizations using zeta potential measurements, scanning electron microscopy, Brunauer-Emmett-Teller surface area, powder X-ray diffraction, Energy Dispersive X-ray Spectroscopy, and FT-IR show concerning differences in enzyme loading and activity based on the buffering system used during immobilization.

Synthesis, structures, bonding, and redox chemistry of ditungsten butadiyne complexes with W[triple bond]C-C[triple bond]W backbones.

Complexes of the form XL(4)W[triple bond]C-C[triple bond]WL(4)X (L = 1/2 dmpe, 1/2 depe, P(OMe)(3); X = Cl, OTf) have been synthesized from (Bu(t)O)(3)WCCW(OBu(t))(3) in two steps via Cl(3)(dme)WCCW(dme)Cl(3), which undergoes facile four-electron reduction in the presence of L. The compounds possess formal d(2)-d(2) electron configurations. The molecular structures of Cl(dmpe)(2)WCCW(dmpe)(2)Cl and Cl{P(OMe)(3)}(4)WCCW{P(OMe)(3)}(4)Cl were determined by X-ray crystallography; bond distances within the backbone are consistent with a W[triple bond]C-C[triple bond]W canonical structure. Density-functional-theory calculations on Cl(dmpe)(2)WCCW(dmpe)(2)Cl and the model compound Cl(PH(3))(4)WCCW(PH(3))(4)Cl, and on their monometallic analogs W(CH)(dmpe)(2)Cl and W(CH)(PH(3))(4)Cl, indicate that the WCCW backbone is strongly pi-conjugated; this is supported by the observation of low-energy pi --> pi* transitions for the compounds. The calculations predict that delta symmetry d(xy)-derived orbitals should be (or lie near) the highest occupied molecular orbital. Consistent with this prediction, the electronic spectra of the compounds exhibit a band attributable to d(xy) --> pi* transition(s), as the lowest-energy feature and electrochemical studies demonstrate that they undergo sequential one-electron oxidations to produce (d(xy))(2)-(d(xy))(1) and (d(xy))(1)-(d(xy))(1) congeners. Due to the delta symmetry of the redox orbitals, the oxidized congeners maintain the W[triple bond]C-C[triple bond]W canonical structure of the parent d(2)-d(2) compounds. The first and second oxidation potentials of Cl(dmpe)(2)WCCW(dmpe)(2)Cl are separated by

Comparison of cysteine and penicillamine ligands in a Co(II) maquette.

l-Penicillamine (Pen) has been investigated as a ligand for metalloprotein design by examining the binding of Co(II) to the sequence NH(2)-KL(Pen)EGG.(Pen)IG(Pen)GA(Pen).GGW-CONH(2). For comparison, we have studied Co(II) binding to the analogous sequence with Cys ligands, the ferredoxin maquette ligand IGA that was originally designed to bind a [4Fe-4S] cluster. The Co(II) affinity and UV-vis spectroscopic properties of IGA indicate formation of a pseudotetrahedral tetrathiolate ligated Co(II). In contrast, IGA-Pen showed formation of a pseudotetrahedral complex with Co(II) bound by three Pen ligands and an exogenous H(2)O. EXAFS data on both Co(II) complexes confirms not only the proposed primary coordination spheres but also shows six Co(II)-C(beta) methyl group distances in Co(II)-IGA-Pen. These results demonstrate that ligand sterics in simple peptides can be designed to provide asymmetric coordination spheres such as those commonly observed in natural metalloproteins.