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1.
Nature ; 577(7791): 509-513, 2020 01.
Artigo em Inglês | MEDLINE | ID: mdl-31747679

RESUMO

The electrocatalytic reduction of carbon dioxide, powered by renewable electricity, to produce valuable fuels and feedstocks provides a sustainable and carbon-neutral approach to the storage of energy produced by intermittent renewable sources1. However, the highly selective generation of economically desirable products such as ethylene from the carbon dioxide reduction reaction (CO2RR) remains a challenge2. Tuning the stabilities of intermediates to favour a desired reaction pathway can improve selectivity3-5, and this has recently been explored for the reaction on copper by controlling morphology6, grain boundaries7, facets8, oxidation state9 and dopants10. Unfortunately, the Faradaic efficiency for ethylene is still low in neutral media (60 per cent at a partial current density of 7 milliamperes per square centimetre in the best catalyst reported so far9), resulting in a low energy efficiency. Here we present a molecular tuning strategy-the functionalization of the surface of electrocatalysts with organic molecules-that stabilizes intermediates for more selective CO2RR to ethylene. Using electrochemical, operando/in situ spectroscopic and computational studies, we investigate the influence of a library of molecules, derived by electro-dimerization of arylpyridiniums11, adsorbed on copper. We find that the adhered molecules improve the stabilization of an 'atop-bound' CO intermediate (that is, an intermediate bound to a single copper atom), thereby favouring further reduction to ethylene. As a result of this strategy, we report the CO2RR to ethylene with a Faradaic efficiency of 72 per cent at a partial current density of 230 milliamperes per square centimetre in a liquid-electrolyte flow cell in a neutral medium. We report stable ethylene electrosynthesis for 190 hours in a system based on a membrane-electrode assembly that provides a full-cell energy efficiency of 20 per cent. We anticipate that this may be generalized to enable molecular strategies to complement heterogeneous catalysts by stabilizing intermediates through local molecular tuning.

2.
J Am Chem Soc ; 146(10): 6544-6556, 2024 03 13.
Artigo em Inglês | MEDLINE | ID: mdl-38426740

RESUMO

Pyrrolysine, the 22nd amino acid encoded by the natural genetic code, is essential for methanogenic archaea to catabolize methylamines into methane. The structure of pyrrolysine consists of a methylated pyrroline carboxylate that is linked to the ε-amino group of the l-lysine via an amide bond. The biosynthesis of pyrrolysine requires three enzymes: PylB, PylC, and PylD. PylB is a radical S-adenosyl-l-methionine (SAM) enzyme and catalyzes the first biosynthetic step, the isomerization of l-lysine into methylornithine. PylC catalyzes an ATP-dependent ligation of methylornithine and a second l-lysine to form l-lysine-Nε-methylornithine. The last biosynthetic step is catalyzed by PylD via oxidation of the PylC product to form pyrrolysine. While enzymatic reactions of PylC and PylD have been well characterized by X-ray crystallography and in vitro studies, mechanistic understanding of PylB is still relatively limited. Here, we report the first in vitro activity of PylB to form methylornithine via the isomerization of l-lysine. We also identify a lysyl C4 radical intermediate that is trapped, with its electronic structure and geometric structure well characterized by EPR and ENDOR spectroscopy. In addition, we demonstrate that SAM functions as a catalytic cofactor in PylB catalysis rather than canonically as a cosubstrate. This work provides detailed mechanistic evidence for elucidating the carbon backbone rearrangement reaction catalyzed by PylB during the biosynthesis of pyrrolysine.


Assuntos
Lisina , Lisina/análogos & derivados , S-Adenosilmetionina , Lisina/química , Código Genético , Amidas/metabolismo
3.
Proc Natl Acad Sci U S A ; 118(21)2021 05 25.
Artigo em Inglês | MEDLINE | ID: mdl-34001621

RESUMO

The radical S-adenosylmethionine (rSAM) enzyme SuiB catalyzes the formation of an unusual carbon-carbon bond between the sidechains of lysine (Lys) and tryptophan (Trp) in the biosynthesis of a ribosomal peptide natural product. Prior work on SuiB has suggested that the Lys-Trp cross-link is formed via radical electrophilic aromatic substitution (rEAS), in which an auxiliary [4Fe-4S] cluster (AuxI), bound in the SPASM domain of SuiB, carries out an essential oxidation reaction during turnover. Despite the prevalence of auxiliary clusters in over 165,000 rSAM enzymes, direct evidence for their catalytic role has not been reported. Here, we have used electron paramagnetic resonance (EPR) spectroscopy to dissect the SuiB mechanism. Our studies reveal substrate-dependent redox potential tuning of the AuxI cluster, constraining it to the oxidized [4Fe-4S]2+ state, which is active in catalysis. We further report the trapping and characterization of an unprecedented cross-linked Lys-Trp radical (Lys-Trp•) in addition to the organometallic Ω intermediate, providing compelling support for the proposed rEAS mechanism. Finally, we observe oxidation of the Lys-Trp• intermediate by the redox-tuned [4Fe-4S]2+ AuxI cluster by EPR spectroscopy. Our findings provide direct evidence for a role of a SPASM domain auxiliary cluster and consolidate rEAS as a mechanistic paradigm for rSAM enzyme-catalyzed carbon-carbon bond-forming reactions.


Assuntos
Proteínas de Bactérias/química , Proteínas Ferro-Enxofre/química , Lisina/química , Proteínas Ribossômicas/química , S-Adenosilmetionina/química , Streptococcus/química , Triptofano/química , Proteínas de Bactérias/genética , Proteínas de Bactérias/metabolismo , Sítios de Ligação , Catálise , Clonagem Molecular , Espectroscopia de Ressonância de Spin Eletrônica , Escherichia coli/genética , Escherichia coli/metabolismo , Expressão Gênica , Vetores Genéticos/química , Vetores Genéticos/metabolismo , Proteínas Ferro-Enxofre/genética , Proteínas Ferro-Enxofre/metabolismo , Cinética , Lisina/metabolismo , Modelos Moleculares , Oxirredução , Ligação Proteica , Conformação Proteica em alfa-Hélice , Conformação Proteica em Folha beta , Domínios e Motivos de Interação entre Proteínas , Proteínas Recombinantes/química , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , Proteínas Ribossômicas/genética , Proteínas Ribossômicas/metabolismo , S-Adenosilmetionina/metabolismo , Streptococcus/enzimologia , Streptococcus/genética , Especificidade por Substrato , Termodinâmica , Triptofano/metabolismo
4.
J Am Chem Soc ; 145(24): 13284-13301, 2023 06 21.
Artigo em Inglês | MEDLINE | ID: mdl-37294874

RESUMO

In multicopper oxidases (MCOs), the type 1 (T1) Cu accepts electrons from the substrate and transfers these to the trinuclear Cu cluster (TNC) where O2 is reduced to H2O. The T1 potential in MCOs varies from 340 to 780 mV, a range not explained by the existing literature. This study focused on the ∼350 mV difference in potential of the T1 center in Fet3p and Trametes versicolor laccase (TvL) that have the same 2His1Cys ligand set. A range of spectroscopies performed on the oxidized and reduced T1 sites in these MCOs shows that they have equivalent geometric and electronic structures. However, the two His ligands of the T1 Cu in Fet3p are H-bonded to carboxylate residues, while in TvL they are H-bonded to noncharged groups. Electron spin echo envelope modulation spectroscopy shows that there are significant differences in the second-sphere H-bonding interactions in the two T1 centers. Redox titrations on type 2-depleted derivatives of Fet3p and its D409A and E185A variants reveal that the two carboxylates (D409 and E185) lower the T1 potential by 110 and 255-285 mV, respectively. Density functional theory calculations uncouple the effects of the charge of the carboxylates and their difference in H-bonding interactions with the His ligands on the T1 potential, indicating 90-150 mV for anionic charge and ∼100 mV for a strong H-bond. Finally, this study provides an explanation for the generally low potentials of metallooxidases relative to the wide range of potentials of the organic oxidases in terms of different oxidized states of their TNCs involved in catalytic turnover.


Assuntos
Ceruloplasmina , Histidina , Ceruloplasmina/química , Ligantes , Cobre/química , Trametes , Eletricidade Estática , Lacase/metabolismo
5.
Angew Chem Int Ed Engl ; 62(52): e202315555, 2023 Dec 21.
Artigo em Inglês | MEDLINE | ID: mdl-37942957

RESUMO

Featuring an extra electron in the π* antibonding orbital, species with a 2-center-3-electron (2c3e) π bond without an underlying σ bond are scarcely known. Herein, we report the synthesis, isolation and characterization of a radical anion salt [K(18-C-6)]+ {[(HCNDipp)2 Si]2 P2 }⋅- (i.e. [K(18-C-6)]+ 3⋅- ) (18-C-6=18-crown-6, Dipp=2,6-diisopropylphenyl), in which 3⋅- features a perfectly planar Si2 P2 four-membered ring. This species represents the first example of a Si- and P-containing analog of a bicyclo[1.1.0]butane radical anion. The unusual bonding motif of 3⋅- was thoroughly investigated via X-ray diffraction crystallography, electron paramagnetic resonance spectroscopy (EPR), and calculations by density functional theory (DFT), which collectively unveiled the existence of a 2c3e π bond between the bridgehead P atoms and no clearly defined supporting P-P σ bond.

6.
J Am Chem Soc ; 144(4): 1534-1538, 2022 02 02.
Artigo em Inglês | MEDLINE | ID: mdl-35041427

RESUMO

The biosynthesis of the active site of the [FeFe]-hydrogenases (HydA1), the H-cluster, is of interest because these enzymes are highly efficient catalysts for the oxidation and production of H2. The biosynthesis of the [2Fe]H subcluster of the H-cluster proceeds from simple precursors, which are processed by three maturases: HydG, HydE, and HydF. Previous studies established that HydG produces an Fe(CO)2(CN) adduct of cysteine, which is the substrate for HydE. In this work, we show that by using the synthetic cluster [Fe2(µ-SH)2(CN)2(CO)4]2- active HydA1 can be biosynthesized without maturases HydG and HydE.


Assuntos
Proteínas de Bactérias/metabolismo , Hidrogenase/química , Proteínas Ferro-Enxofre/química , Transativadores/metabolismo , Catálise , Domínio Catalítico , Espectroscopia de Ressonância de Spin Eletrônica , Hidrogênio/química , Hidrogênio/metabolismo , Hidrogenase/metabolismo , Conformação Molecular , Compostos Organometálicos/química , Compostos Organometálicos/metabolismo , Oxirredução
7.
Appl Magn Reson ; 53(3-5): 809-820, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-35509369

RESUMO

Owing to their importance, diversity and abundance of generated paramagnetic species, radical S-adenosylmethionine (rSAM) enzymes have become popular targets for electron paramagnetic resonance (EPR) spectroscopic studies. In contrast to prototypic single-domain and thus single-[4Fe-4S]-containing rSAM enzymes, there is a large subfamily of rSAM enzymes with multiple domains and one or two additional iron-sulfur cluster(s) called the SPASM/twitch domain-containing rSAM enzymes. EPR spectroscopy is a powerful tool that allows for the observation of the iron-sulfur clusters as well as potentially trappable paramagnetic reaction intermediates. Here, we review continuous-wave and pulse EPR spectroscopic studies of SPASM/twitch domain-containing rSAM enzymes. Among these enzymes, we will review in greater depth four well-studied enzymes, BtrN, MoaA, PqqE, and SuiB. Towards establishing a functional consensus of the additional architecture in these enzymes, we describe the commonalities between these enzymes as observed by EPR spectroscopy.

8.
Angew Chem Int Ed Engl ; 61(30): e202204570, 2022 07 25.
Artigo em Inglês | MEDLINE | ID: mdl-35580198

RESUMO

S/N crosstalk species derived from the interconnected reactivity of H2 S and NO facilitate the transport of reactive sulfur and nitrogen species in signaling, transport, and regulatory processes. We report here that simple Fe2+ ions, such as those that are bioavailable in the labile iron pool (LIP), react with thionitrite (SNO- ) and perthionitrite (SSNO- ) to yield the dinitrosyl iron complex [Fe(NO)2 (S5 )]- . In the reaction of FeCl2 with SNO- we were able to isolate the unstable intermediate hydrosulfido mononitrosyl iron complex [FeCl2 (NO)(SH)]- , which was characterized by X-ray crystallography. We also show that [Fe(NO)2 (S5 )]- is a simple synthon for nitrosylated Fe-S clusters via its reduction with PPh3 to yield Roussin's Red Salt ([Fe2 S2 (NO)4 ]2- ), which highlights the role of S/N crosstalk species in the assembly of fundamental Fe-S motifs.


Assuntos
Ferro , Compostos Nitrosos , Ferro/química , Nitritos , Compostos de Sulfidrila , Enxofre
9.
J Am Chem Soc ; 143(22): 8499-8508, 2021 06 09.
Artigo em Inglês | MEDLINE | ID: mdl-34048236

RESUMO

[FeFe]-hydrogenases use a unique organometallic complex, termed the H cluster, to reversibly convert H2 into protons and low-potential electrons. It can be best described as a [Fe4S4] cluster coupled to a unique [2Fe]H center where the reaction actually takes place. The latter corresponds to two iron atoms, each of which is bound by one CN- ligand and one CO ligand. The two iron atoms are connected by a unique azadithiolate molecule (-S-CH2-NH-CH2-S-) and an additional bridging CO. This [2Fe]H center is built stepwise thanks to the well-orchestrated action of maturating enzymes that belong to the Hyd machinery. Among them, HydG converts l-tyrosine into CO and CN- to produce a unique l-cysteine-Fe(CO)2CN species termed complex-B. Very recently, HydE was shown to perform radical-based chemistry using synthetic complex-B as a substrate. Here we report the high-resolution crystal structure that establishes the identity of the complex-B-bound HydE. By triggering the reaction prior to crystallization, we trapped a new five-coordinate Fe species, supporting the proposal that HydE performs complex modifications of complex-B to produce a monomeric "SFe(CO)2CN" precursor to the [2Fe]H center. Substrate access, product release, and intermediate transfer are also discussed.


Assuntos
Hidrogenase/química , Proteínas Ferro-Enxofre/química , Hidrogenase/metabolismo , Proteínas Ferro-Enxofre/metabolismo , Modelos Moleculares , Conformação Proteica
10.
J Am Chem Soc ; 142(24): 10841-10848, 2020 06 17.
Artigo em Inglês | MEDLINE | ID: mdl-32434327

RESUMO

The H-cluster of [FeFe]-hydrogenase consists of a [4Fe-4S]H-subcluster linked by a cysteinyl bridge to a unique organometallic [2Fe]H-subcluster assigned as the site of interconversion between protons and molecular hydrogen. This [2Fe]H-subcluster is assembled by a set of Fe-S maturase enzymes HydG, HydE and HydF. Here we show that the HydG product [FeII(Cys)(CO)2(CN)] synthon is the substrate of the radical SAM enzyme HydE, with the generated 5'-deoxyadenosyl radical attacking the cysteine S to form a C5'-S bond concomitant with reduction of the central low-spin Fe(II) to the Fe(I) oxidation state. This leads to the cleavage of the cysteine C3-S bond, producing a mononuclear [FeI(CO)2(CN)S] species that serves as the precursor to the dinuclear Fe(I)Fe(I) center of the [2Fe]H-subcluster. This work unveils the role played by HydE in the enzymatic assembly of the H-cluster and expands the scope of radical SAM enzyme chemistry.


Assuntos
Hidrogenase/metabolismo , Compostos de Ferro/metabolismo , S-Adenosilmetionina/metabolismo , Thermotoga maritima/enzimologia , Biocatálise , Hidrogenase/química , Compostos de Ferro/química , Conformação Molecular , S-Adenosilmetionina/química
11.
J Am Chem Soc ; 142(29): 12620-12634, 2020 07 22.
Artigo em Inglês | MEDLINE | ID: mdl-32643933

RESUMO

Understanding the relationship between the metallocofactor and its protein environment is the key to uncovering the mechanism of metalloenzymes. PqqE, a radical S-adenosylmethionine enzyme in pyrroloquinoline quinone (PQQ) biosynthesis, contains three iron-sulfur cluster binding sites. Two auxiliary iron-sulfur cluster binding sites, designated as AuxI and AuxII, use distinctive ligands compared to other proteins in the family while their functions remain unclear. Here, we investigate the electronic properties of these iron-sulfur clusters and compare the catalytic efficiency of wild-type (WT) Methylorubrum extorquens AM1 PqqE to a range of mutated constructs. Using native mass spectrometry, protein film electrochemistry, and electron paramagnetic resonance spectroscopy, we confirm the previously proposed incorporation of a mixture of [2Fe-2S] and [4Fe-4S] clusters at the AuxI site and are able to assign redox potentials to each of the three iron-sulfur clusters. Significantly, a conservative mutation at AuxI, C268H, shown to selectively incorporate a [4Fe-4S] cluster, catalyzes an enhancement of uncoupled S-adenosylmethionine cleavage relative to WT, together with the elimination of detectable peptide cross-linked product. While a [4Fe-4S] cluster can be tolerated at the AuxI site, the aggregate findings suggest a functional [2Fe-2S] configuration within the AuxI site. PqqE variants with nondestructive ligand replacements at AuxII also show that the reduction potential at this site can be manipulated by changing the electronegativity of the unique aspartate ligand. A number of novel mechanistic features are proposed based on the kinetic and spectroscopic data. Additionally, bioinformatic analyses suggest that the unique ligand environment of PqqE may be relevant to its role in PQQ biosynthesis within an oxygen-dependent biosynthetic pathway.


Assuntos
Proteínas de Bactérias/metabolismo , Endopeptidases/metabolismo , Ferro/metabolismo , Methylobacterium extorquens/química , Enxofre/metabolismo , Proteínas de Bactérias/química , Biocatálise , Cristalografia por Raios X , Endopeptidases/química , Ferro/química , Methylobacterium extorquens/metabolismo , Modelos Moleculares , Estrutura Molecular , Enxofre/química
12.
Inorg Chem ; 59(13): 9339-9349, 2020 Jul 06.
Artigo em Inglês | MEDLINE | ID: mdl-32510934

RESUMO

The connecting peptide (C-peptide) is a hormone with promising health benefits in ameliorating diabetes-related complications, yet mechanisms remain elusive. Emerging studies point to a possible dependence of peptide activity on bioavailable metals, particularly Cu(II) and Zn(II). However, little is known about the chemical nature of the interactions, hindering advances in its therapeutic applications. This work uncovers the Cu(II)-binding site in C-peptide that may be key to understanding its metal-dependent function. A combination of spectroscopic studies reveal that Cu(II) and Zn(II) bind to C-peptide at specific residues in the N-terminal region of the peptide and that Cu(II) is able to displace Zn(II) for C-peptide binding. The data point to a Cu(II)-binding site consisting of 1N3O square-planar coordination that is entropically driven. Furthermore, the entire random coil peptide sequence is needed for specific metal binding as mutations and truncations reshuffle the coordinating residues. These results expand our understanding of how metals influence hormone activity and facilitate the discovery and validation of both new and established paradigms in peptide biology.


Assuntos
Peptídeo C/metabolismo , Cobre/metabolismo , Sequência de Aminoácidos , Sítios de Ligação , Peptídeo C/química , Ligação Proteica , Conformação Proteica , Termodinâmica , Zinco/metabolismo
13.
Biochemistry ; 58(51): 5173-5187, 2019 12 24.
Artigo em Inglês | MEDLINE | ID: mdl-31769977

RESUMO

Pyrroloquinoline quinone (PQQ) is an important redox active quinocofactor produced by a wide variety of bacteria. A key step in PQQ biosynthesis is a carbon-carbon cross-link reaction between glutamate and tyrosine side chains within the ribosomally synthesized peptide substrate PqqA. This reaction is catalyzed by the radical SAM enzyme PqqE. Previous X-ray crystallographic and spectroscopic studies suggested that PqqE, like the other members of the SPASM domain family, contains two auxiliary Fe-S clusters (AuxI and AuxII) in addition to the radical SAM [4Fe-4S] cluster. However, a clear assignment of the electron paramagnetic resonance (EPR) signal of each Fe-S cluster was hindered by the isolation of a His6-tagged PqqE variant with an altered AuxI cluster. In this work, we are able to isolate soluble PqqE variants by using a less disruptive strep-tactin chromatographic approach. We have unambiguously identified the EPR signatures for four forms of Fe-S clusters present in PqqE through the use of multifrequency EPR spectroscopy: the RS [4Fe-4S] cluster, the AuxII [4Fe-4S] cluster, and two different clusters ([4Fe-4S] and [2Fe-2S]) bound in the AuxI site. The RS [4Fe-4S] cluster, the AuxII [4Fe-4S] cluster, and the [2Fe-2S] cluster form in the AuxI site can all be reduced by sodium dithionite, with g tensors of their reduced form determined as [2.040, 1.927, 1.897], [2.059, 1.940, 1.903], and [2.004, 1.958, 1.904], respectively. The AuxI [4Fe-4S] cluster that is determined on the basis of its relaxation profile can be reduced only by using low-potential reductants such as Ti(III) citrate or Eu(II)-DTPA to give rise to a g1 = 2.104 signal. Identification of the EPR signature for each cluster paves the way for further investigations of SPASM domain radical SAM enzymes.


Assuntos
Espectroscopia de Ressonância de Spin Eletrônica , Endopeptidases/química , Endopeptidases/metabolismo , Ferro , Enxofre , Biocatálise , Cofator PQQ/metabolismo , Domínios Proteicos
14.
J Am Chem Soc ; 141(32): 12527-12530, 2019 08 14.
Artigo em Inglês | MEDLINE | ID: mdl-31345027

RESUMO

The tin-tin triple bond in the distannyne AriPr4SnSnAriPr4, AriPr4 = C6H3-2,6(C6H3-2,6-iPr2)2, undergoes reversible cleavage in deuterated toluene to afford two :SnAriPr4 radicals in solution as shown by 1H nuclear magnetic resonance and electron paramagnetic resonance spectroscopy. Variable temperature data afforded an enthalpy of dissociation of ΔHdiss = 17.2 ± 1.7 kcal mol-1 via van't Hoff analysis.


Assuntos
Compostos Orgânicos de Estanho/química , Estanho/química , Espectroscopia de Ressonância de Spin Eletrônica , Radicais Livres/química , Espectroscopia de Prótons por Ressonância Magnética , Eletricidade Estática , Termodinâmica
15.
J Biol Inorg Chem ; 24(1): 117-135, 2019 02.
Artigo em Inglês | MEDLINE | ID: mdl-30523412

RESUMO

The CuA center is the initial electron acceptor in cytochrome c oxidase, and it consists of two copper ions bridged by two cysteines and ligated by two histidines, a methionine, and a carbonyl in the peptide backbone of a nearby glutamine. The two ligating histidines are of particular interest as they may influence the electronic and redox properties of the metal center. To test for the presence of reactive ligating histidines, a portion of cytochrome c oxidase from the bacteria Thermus thermophilus that contains the CuA site (the TtCuA protein) was treated with the chemical modifier diethyl pyrocarbonate (DEPC) and the reaction followed through UV-visible, circular dichroism, and electron paramagnetic resonance spectroscopies at pH 5.0-9.0. A mutant protein (H40A/H117A) with the non-ligating histidines removed was similarly tested. Introduction of an electron-withdrawing DEPC-modification onto the ligating histidine 157 of TtCuA increased the reduction potential by over 70 mV, as assessed by cyclic voltammetry. Results from both proteins indicate that DEPC reacts with one of the two ligating histidines, modification of a ligating histidine raises the reduction potential of the CuA site, and formation of the DEPC adduct is reversible at room temperature. The existence of the reactive ligating histidine suggests that this residue may play a role in modulating the electronic and redox properties of TtCuA through kinetically-controlled proton exchange with the solvent. Lack of reactivity by the metalloproteins Sco and azurin, both of which contain a mononuclear copper center, indicate that reactivity toward DEPC is not a characteristic of all ligating histidines.


Assuntos
Proteínas de Bactérias/química , Dietil Pirocarbonato/química , Complexo IV da Cadeia de Transporte de Elétrons/química , Histidina/química , Thermus thermophilus/química , Proteínas de Bactérias/metabolismo , Cobre/química , Cobre/metabolismo , Dietil Pirocarbonato/metabolismo , Complexo IV da Cadeia de Transporte de Elétrons/metabolismo , Histidina/metabolismo , Modelos Moleculares , Oxirredução , Thermus thermophilus/enzimologia , Thermus thermophilus/metabolismo
16.
Inorg Chem ; 58(22): 15034-15038, 2019 Nov 18.
Artigo em Inglês | MEDLINE | ID: mdl-31651165

RESUMO

Herein, we report the characterization of a novel germanium hydride radical arising from the photolysis/thermolysis of the diarylgermylene GeR2 [R = terphenyl: AriPr4 = C6H3-2,6-(C6H3-2,6-iPr2)2 or AriPr6 = C6H3-2,6-(C6H2-2,4,6-iPr3)2] by using electron paramagnetic resonance spectroscopy complemented with theoretical calculations. The trapped germanium radical is a pseudoplanar S = 1/2 germanium(III) hydride, i.e., •GeHRR' (R = AriPr4 or AriPr6; R' is a quaternary carbon), with a g tensor of [2.029, 2.003, 1.990], a 73Ge hyperfine tensor of [-10, -90, -10] MHz, and a strong 1H hyperfine tensor of [-23.0, -20.5, -31.5] MHz for the hydride. The germanium(III) hydride radical is a result of the insertion of a germanium(I) radical intermediate (:GeR) in a C-H bond, due to the greater reactivity of the germanium(I) radical intermediate in comparison with the tin(I) counterpart that we trapped earlier.

17.
Inorg Chem ; 58(13): 8793-8799, 2019 Jul 01.
Artigo em Inglês | MEDLINE | ID: mdl-31187985

RESUMO

The synthesis and spectroscopic, structural, and magnetic characterization of the quasi-linear metal(II) bis(amides) M{N(SiPr i3)Dipp}2 [Dipp = C6H3-2,6-Pr i3; M = Fe (1), Co (2), or Zn (3)] are described. The magnetic data demonstrate the impact of metal ligand π-interactions on the magnetic properties of these two-coordinate transition metal amides. Disproportionation of the copper(I) amide species featuring the ligand -N(SiPr i3)Dipp resulted in the decomposition product [(Pr i3Si)N( c-C6H2-2,6-Pr i2)]2 (4). The electron paramagnetic resonance spectrum of the unstable two-coordinate Cu{N(SiPr i3)Dipp}2 displays significantly less Cu-N bond covalency than the stable two-coordinate copper(II) species Cu{N(SiMe3)Dipp}2. The testing of -N(SiPr i3)Dipp and a range of other, related bulky amide ligands with their copper derivatives highlights the peculiar combination of steric and electronic properties of the Wigley ligand -N(SiMe3)Dipp that enable it to stabilize the unique two-coordinate copper(II) complex Cu{N(SiMe3)Dipp}2.

18.
Inorg Chem ; 58(12): 7978-7988, 2019 Jun 17.
Artigo em Inglês | MEDLINE | ID: mdl-31185562

RESUMO

Accessing covalent bonding interactions between actinides and ligating atoms remains a central problem in the field. Our current understanding of actinide bonding is limited because of a paucity of diverse classes of compounds and the lack of established models. We recently synthesized a thorium (Th)-aluminum (Al) heterobimetallic molecule that represents a new class of low-valent Th-containing compounds. To gain further insight into this system and actinide-metal bonding more generally, it is useful to study their underlying electronic structures. Here, we report characterization by electron paramagnetic resonance (EPR) and electron-nuclear double resonance (ENDOR) spectroscopy of two heterobimetallic compounds: (i) a Cptt2ThH3AlCTMS3 [TMS = Si(CH3)3; Cptt = 1,3-di- tert-butylcyclopentadienyl] complex with bridging hydrides and (ii) an actinide-free Cp2TiH3AlCTMS3 (Cp = cyclopentadienyl) analogue. Analyses of the hyperfine interactions between the paramagnetic trivalent metal centers and the surrounding magnetic nuclei, 1H and 27Al, yield spin distributions over both complexes. These results show that while the bridging hydrides in the two complexes have similar hyperfine couplings ( aiso = -9.7 and -10.7 MHz, respectively), the spin density on the Al ion in the Th3+ complex is ∼5-fold larger than that in the titanium(3+) (Ti3+) analogue. This suggests a direct orbital overlap between Th and Al, leading to a covalent interaction between Th and Al. Our quantitative investigation by a pulse EPR technique deepens our understanding of actinide bonding to main-group elements.

19.
J Am Chem Soc ; 140(40): 12947-12963, 2018 10 10.
Artigo em Inglês | MEDLINE | ID: mdl-30222930

RESUMO

Biotin (vitamin B7) is an enzyme cofactor required by organisms from all branches of life but synthesized only in microbes and plants. In the final step of biotin biosynthesis, a radical S-adenosyl-l-methionine (SAM) enzyme, biotin synthase (BioB), converts the substrate dethiobiotin to biotin through the stepwise formation of two C-S bonds. Previous electron paramagnetic resonance (EPR) spectroscopic studies identified a semistable intermediate in the formation of the first C-S bond as 9-mercaptodethiobiotin linked to a paramagnetic [2Fe-2S] cluster through one of its bridging sulfides. Herein, we report orientation-selected pulse EPR spectroscopic results that reveal hyperfine interactions between the [2Fe-2S] cluster and a number of magnetic nuclei (e.g., 57Fe, 15N, 13C, and 2H) introduced in a site-specific manner via biosynthetic methods. Combining these results with quantum chemical modeling gives a structural model of the intermediate showing that C6, the target of the second hydrogen-atom abstraction, is now in close proximity to the nascent thioether sulfur and is ideally positioned for the second C-S bond forming event.


Assuntos
Espectroscopia de Ressonância de Spin Eletrônica , Proteínas de Escherichia coli/metabolismo , Escherichia coli/metabolismo , Sulfurtransferases/metabolismo , Biotina/análogos & derivados , Biotina/química , Biotina/metabolismo , Escherichia coli/química , Proteínas de Escherichia coli/química , Modelos Moleculares , Conformação Proteica , Sulfurtransferases/química
20.
J Biol Inorg Chem ; 23(7): 1093-1104, 2018 10.
Artigo em Inglês | MEDLINE | ID: mdl-29968177

RESUMO

The multi-copper oxidase (MCO) MnxG from marine Bacillus bacteria plays an essential role in geochemical cycling of manganese by oxidizing Mn2+(aq) to form manganese oxide minerals at rates that are three to five orders of magnitude faster than abiotic rates. The MCO MnxG protein is isolated as part of a multi-protein complex, denoted as Mnx, which includes one MnxG unit and a hexamer of MnxE3F3 subunit. During the oxidation of Mn2+(aq) catalyzed by the Mnx protein complex, an enzyme-bound Mn(III) species was trapped recently in the presence of pyrophosphate (PP) and analyzed using parallel-mode electron paramagnetic resonance (EPR) spectroscopy. Herein, we provide a full analysis of this enzyme-bound Mn(III) intermediate via temperature dependence studies and spectral simulations. This Mnx-bound Mn(III) species is characterized by a hyperfine-coupling value of A(55Mn) = 4.2 mT (corresponding to 120 MHz) and a negative zero-field splitting (ZFS) value of D = - 2.0 cm-1. These magnetic properties suggest that the Mnx-bound Mn(III) species could be either six-coordinate with a 5B1g ground state or square-pyramidal five-coordinate with a 5B1 ground state. In addition, as a control, Mn(III)PP is also analyzed by parallel-mode EPR spectroscopy. It exhibits distinctly different magnetic properties with a hyperfine-coupling value of A(55Mn) = 4.8 mT (corresponding to 140 MHz) and a negative ZFS value of D = - 2.5 cm-1. The different ZFS values suggest differences in ligand environment of Mnx-bound Mn(III) and aqueous Mn(III)PP species. These studies provide further insights into the mechanism of biological Mn2+(aq) oxidation.


Assuntos
Manganês/metabolismo , Oxirredutases/metabolismo , Bacillus/enzimologia , Espectroscopia de Ressonância de Spin Eletrônica , Manganês/química , Modelos Moleculares , Oxirredutases/química , Oxirredutases/isolamento & purificação , Temperatura
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