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1.
Biomed Eng Online ; 16(1): 28, 2017 Feb 16.
Artigo em Inglês | MEDLINE | ID: mdl-28202066

RESUMO

BACKGROUND: Mitotic rate is routinely assessed in breast cancer cases and based on the assessment of 10 high power fields (HPF), a non-standard sample area, as per the College of American Pathologists cancer checklist. The effect of sample area variation has not been assessed. METHODS: A computer model making use of the binomial distribution was developed to calculate the misclassification rate in 1,000,000 simulated breast specimens using the extremes of field diameter (FD) and mitotic density cutoffs (3 and 8 mitoses/mm2), and for a sample area of 5 mm2. Mitotic counts were assumed to be a random sampling problem using a mitotic rate distribution derived from an experimental study (range 0-16.4 mitoses/mm2). The cellular density was 2500 cell/mm2. RESULTS: For the smallest microscopes (FD = 0.40 mm, area 1.26 mm2) 16% of cases were misclassified, compared to 9% of the largest (FD 0.69 mm, area 3.74 mm2), versus 8% for 5 mm2. An excess of 27% of score 2 cases were misclassified as 1 or 3 for the lower FD. CONCLUSION: Mitotic scores based on ten HPFs of a small field area microscope are less reliable measures of the mitotic density than in a bigger field area microscope; therefore, the sample area should be standardized. When mitotic counts are close to the cut-offs the score is less reproducible. These cases could benefit from using larger sample areas. A measure of mitotic density variation due to sampling may assist in the interpretation of the mitotic score.


Assuntos
Neoplasias da Mama/diagnóstico , Contagem de Células/normas , Mitose , Linhagem Celular Tumoral , Simulação por Computador , Feminino , Humanos , Microscopia , Reprodutibilidade dos Testes , Manejo de Espécimes
2.
Biomacromolecules ; 11(12): 3325-31, 2010 Dec 13.
Artigo em Inglês | MEDLINE | ID: mdl-20961143

RESUMO

Long-range electrostatic interactions are generally assigned a subordinate role in the high-affinity binding of proteins by glycosaminoglycans, the most highly charged biopolyelectrolytes. The discovery of high and low sulfation domains in heparan sulfates, however, suggests selectivity via complementarity of their linear sulfation patterns with protein charge patterns. We examined how charge sequences in anionic/nonionic copolymers affect their binding to a protein with prominent charge anisotropy. Experiments and united-atom Monte Carlo simulations, together with Delphi electrostatic modeling for the protein, confirm strongest binding when polyanion sequences allow for optimization of repulsive and attractive electrostatics. Simulations also importantly identified retention of considerable polyion conformational freedom, even for strong binding. The selective affinity for heparins of high and low charge density found for this protein is consistent with nonspecific binding to distinctly different protein charge domains. These findings suggest a more nuanced view of specificity than previously proposed for heparinoid-binding proteins.


Assuntos
Heparina/química , Polímeros/química , Ligação Proteica , Proteínas/química , Eletricidade Estática , Simulação por Computador , Polieletrólitos , Conformação Proteica
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