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1.
Nucleic Acids Res ; 51(16): 8383-8401, 2023 09 08.
Artigo em Inglês | MEDLINE | ID: mdl-37526283

RESUMO

Gene functional descriptions offer a crucial line of evidence for candidate genes underlying trait variation. Conversely, plant responses to environmental cues represent important resources to decipher gene function and subsequently provide molecular targets for plant improvement through gene editing. However, biological roles of large proportions of genes across the plant phylogeny are poorly annotated. Here we describe the Joint Genome Institute (JGI) Plant Gene Atlas, an updateable data resource consisting of transcript abundance assays spanning 18 diverse species. To integrate across these diverse genotypes, we analyzed expression profiles, built gene clusters that exhibited tissue/condition specific expression, and tested for transcriptional response to environmental queues. We discovered extensive phylogenetically constrained and condition-specific expression profiles for genes without any previously documented functional annotation. Such conserved expression patterns and tightly co-expressed gene clusters let us assign expression derived additional biological information to 64 495 genes with otherwise unknown functions. The ever-expanding Gene Atlas resource is available at JGI Plant Gene Atlas (https://plantgeneatlas.jgi.doe.gov) and Phytozome (https://phytozome.jgi.doe.gov/), providing bulk access to data and user-specified queries of gene sets. Combined, these web interfaces let users access differentially expressed genes, track orthologs across the Gene Atlas plants, graphically represent co-expressed genes, and visualize gene ontology and pathway enrichments.


Assuntos
Genes de Plantas , Transcriptoma , Regulação da Expressão Gênica de Plantas , Genoma de Planta , Filogenia , Software , Transcriptoma/genética , Atlas como Assunto
2.
Nat Prod Rep ; 40(4): 766-793, 2023 04 26.
Artigo em Inglês | MEDLINE | ID: mdl-36880348

RESUMO

Covering: up to the beginning of 2023Many animals release volatile or semi-volatile terpenes as semiochemicals in intra- and inter-specific interactions. Terpenes are important constituents of pheromones and serve as chemical defenses to ward off predators. Despite the occurrence of terpene specialized metabolites from soft corals to mammals, the biosynthetic origin of these compounds has largely remained obscure. An increasing number of animal genome and transcriptome resources is facilitating the identification of enzymes and pathways that allow animals to produce terpenes independent of their food sources or microbial endosymbionts. Substantial evidence has emerged for the presence of terpene biosynthetic pathways such as in the formation of the iridoid sex pheromone nepetalactone in aphids. In addition, terpene synthase (TPS) enzymes have been discovered that are evolutionary unrelated to canonical plant and microbial TPSs and instead resemble precursor enzymes called isoprenyl diphosphate synthases (IDSs) in central terpene metabolism. Structural modifications of substrate binding motifs in canonical IDS proteins presumably facilitated the transition to TPS function at an early state in insect evolution. Other arthropods such as mites appear to have adopted their TPS genes from microbial sources via horizontal gene transfer. A similar scenario likely occurred in soft corals, where TPS families with closer resemblance to microbial TPSs have been discovered recently. Together, these findings will spur the identification of similar or still unknown enzymes in terpene biosynthesis in other lineages of animals. They will also help develop biotechnological applications for animal derived terpenes of pharmaceutical value or advance sustainable agricultural practices in pest management.


Assuntos
Alquil e Aril Transferases , Animais , Filogenia , Alquil e Aril Transferases/genética , Terpenos/metabolismo , Feromônios , Mamíferos
3.
Plant J ; 106(2): 314-325, 2021 04.
Artigo em Inglês | MEDLINE | ID: mdl-33506558

RESUMO

Volatile organic compounds (VOCs) released by plants serve as information and defense chemicals in mutualistic and antagonistic interactions and mitigate effects of abiotic stress. Passive and dynamic sampling techniques combined with gas chromatography-mass spectrometry analysis have become routine tools to measure emissions of VOCs and determine their various functions. More recently, knowledge of the roles of plant VOCs in the aboveground environment has led to the exploration of similar functions in the soil and rhizosphere. Moreover, VOC patterns have been recognized as sensitive and time-dependent markers of biotic and abiotic stress. This focused review addresses these developments by presenting recent progress in VOC sampling and analysis. We show advances in the use of small, inexpensive sampling devices and describe methods to monitor plant VOC emissions in the belowground environment. We further address latest trends in real-time measurements of volatilomes in plant phenotyping and most recent developments of small portable devices and VOC sensors for non-invasive VOC fingerprinting of plant disease. These technologies allow for innovative approaches to study plant VOC biology and application in agriculture.


Assuntos
Plantas/química , Compostos Orgânicos Voláteis/análise , Componentes Aéreos da Planta/química , Doenças das Plantas , Raízes de Plantas/química , Plantas/metabolismo , Solo
4.
Proc Natl Acad Sci U S A ; 115(37): E8634-E8641, 2018 09 11.
Artigo em Inglês | MEDLINE | ID: mdl-30139915

RESUMO

Insects use a diverse array of specialized terpene metabolites as pheromones in intraspecific interactions. In contrast to plants and microbes, which employ enzymes called terpene synthases (TPSs) to synthesize terpene metabolites, limited information from few species is available about the enzymatic mechanisms underlying terpene pheromone biosynthesis in insects. Several stink bugs (Hemiptera: Pentatomidae), among them severe agricultural pests, release 15-carbon sesquiterpenes with a bisabolene skeleton as sex or aggregation pheromones. The harlequin bug, Murgantia histrionica, a specialist pest of crucifers, uses two stereoisomers of 10,11-epoxy-1-bisabolen-3-ol as a male-released aggregation pheromone called murgantiol. We show that MhTPS (MhIDS-1), an enzyme unrelated to plant and microbial TPSs but with similarity to trans-isoprenyl diphosphate synthases (IDS) of the core terpene biosynthetic pathway, catalyzes the formation of (1S,6S,7R)-1,10-bisaboladien-1-ol (sesquipiperitol) as a terpene intermediate in murgantiol biosynthesis. Sesquipiperitol, a so-far-unknown compound in animals, also occurs in plants, indicating convergent evolution in the biosynthesis of this sesquiterpene. RNAi-mediated knockdown of MhTPS mRNA confirmed the role of MhTPS in murgantiol biosynthesis. MhTPS expression is highly specific to tissues lining the cuticle of the abdominal sternites of mature males. Phylogenetic analysis suggests that MhTPS is derived from a trans-IDS progenitor and diverged from bona fide trans-IDS proteins including MhIDS-2, which functions as an (E,E)-farnesyl diphosphate (FPP) synthase. Structure-guided mutagenesis revealed several residues critical to MhTPS and MhFPPS activity. The emergence of an IDS-like protein with TPS activity in M. histrionica demonstrates that de novo terpene biosynthesis evolved in the Hemiptera in an adaptation for intraspecific communication.


Assuntos
Alquil e Aril Transferases/metabolismo , Heterópteros/metabolismo , Proteínas de Insetos/metabolismo , Feromônios/metabolismo , Sesquiterpenos/metabolismo , Alquil e Aril Transferases/classificação , Alquil e Aril Transferases/genética , Animais , Vias Biossintéticas/genética , Heterópteros/enzimologia , Heterópteros/genética , Proteínas de Insetos/química , Proteínas de Insetos/genética , Masculino , Modelos Moleculares , Estrutura Molecular , Feromônios/química , Filogenia , Fosfatos de Poli-Isoprenil/metabolismo , Domínios Proteicos , Sesquiterpenos/química , Estereoisomerismo
5.
Plant Cell ; 34(5): 1421-1424, 2022 04 26.
Artigo em Inglês | MEDLINE | ID: mdl-35201349
6.
New Phytol ; 223(1): 52-67, 2019 07.
Artigo em Inglês | MEDLINE | ID: mdl-30707438

RESUMO

Despite the phylogenetic distance between plants and insects, these two groups of organisms produce some secondary metabolites in common. Identical structures belonging to chemical classes such as the simple monoterpenes and sesquiterpenes, iridoid monoterpenes, cyanogenic glycosides, benzoic acid derivatives, benzoquinones and naphthoquinones are sometimes found in both plants and insects. In addition, very similar glucohydrolases involved in activating two-component defenses, such as glucosinolates and cyanogenic glycosides, occur in both plants and insects. Although this trend was first noted many years ago, researchers have long struggled to find convincing explanations for such co-occurrence. In some cases, identical compounds may be produced by plants to interfere with their function in insects. In others, plant and insect compounds may simply have parallel functions, probably in defense or attraction, and their co-occurrence is a coincidence. The biosynthetic origin of such co-occurring metabolites may be very different in insects as compared to plants. Plants and insects may have different pathways to the same metabolite, or similar sequences of intermediates, but different enzymes. Further knowledge of the ecological roles and biosynthetic pathways of secondary metabolites may shed more light on why plants and insects produce identical substances.


Assuntos
Vias Biossintéticas , Insetos/metabolismo , Plantas/metabolismo , Metabolismo Secundário , Animais , Filogenia
7.
Plant Physiol ; 178(1): 54-71, 2018 09.
Artigo em Inglês | MEDLINE | ID: mdl-30008447

RESUMO

Diterpenoids constitute a diverse class of metabolites with critical functions in plant development, defense, and ecological adaptation. Major monocot crops, such as maize (Zea mays) and rice (Oryza sativa), deploy diverse blends of specialized diterpenoids as core components of biotic and abiotic stress resilience. Here, we describe the genome-wide identification and functional characterization of stress-related diterpene synthases (diTPSs) in the dedicated bioenergy crop switchgrass (Panicum virgatum). Mining of the allotetraploid switchgrass genome identified an expansive diTPS family of 31 members, and biochemical analysis of 11 diTPSs revealed a modular metabolic network producing a diverse array of diterpenoid metabolites. In addition to ent-copalyl diphosphate (CPP) and ent-kaurene synthases predictably involved in gibberellin biosynthesis, we identified syn-CPP and ent-labda-13-en-8-ol diphosphate (LPP) synthases as well as two diTPSs forming (+)-labda-8,13E-dienyl diphosphate (8,13-CPP) and ent-neo-cis-trans-clerodienyl diphosphate (CT-CLPP) scaffolds not observed previously in plants. Structure-guided mutagenesis of the (+)-8,13-CPP and ent-neo-CT-CLPP synthases revealed residue substitutions in the active sites that altered product outcome, representing potential neofunctionalization events that occurred during diversification of the switchgrass diTPS family. The conversion of ent-CPP, ent-LPP, syn-CPP, and ent-neo-CT-CLPP by promiscuous diTPSs further yielded distinct labdane-type diterpene olefins and alcohols. Of these metabolites, the formation of 9ß-hydroxy-syn-pimar-15-ene and the expression of the corresponding genes were induced in roots and leaves in response to oxidative stress and ultraviolet irradiation, indicating their possible roles in abiotic stress adaptation. Together, these findings expand the known chemical space of diterpenoid metabolism in monocot crops toward systematically investigating and ultimately improving stress resilience traits in crop species.


Assuntos
Alquil e Aril Transferases/metabolismo , Biocombustíveis , Diterpenos do Tipo Caurano/metabolismo , Panicum/metabolismo , Proteínas de Plantas/metabolismo , Alquil e Aril Transferases/classificação , Alquil e Aril Transferases/genética , Domínio Catalítico , Diterpenos do Tipo Caurano/química , Regulação da Expressão Gênica de Plantas , Variação Genética , Modelos Moleculares , Estrutura Molecular , Família Multigênica , Panicum/genética , Filogenia , Folhas de Planta/genética , Folhas de Planta/metabolismo , Proteínas de Plantas/química , Proteínas de Plantas/genética , Raízes de Plantas/genética , Raízes de Plantas/metabolismo , Domínios Proteicos
8.
J Chem Ecol ; 45(2): 187-197, 2019 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-30267360

RESUMO

Insects use a wide range of structurally diverse pheromones for intra-specific communication. Compounds in the class of terpenes are emitted as sex, aggregation, alarm, or trail pheromones. Despite the common occurrence of terpene pheromones in different insect lineages, their origin from dietary host plant precursors or de novo biosynthetic pathways often remains unknown. Several stink bugs (Hemiptera: Pentatomidae) release bisabolene-type sesquiterpenes for aggregation and mating. Here we provide evidence for de novo biosynthesis of the sex pheromone trans-/cis-(Z)-α-bisabolene epoxide of the Southern green stink bug, Nezara viridula. We show that an enzyme (NvTPS) related to isoprenyl diphosphate synthases (IDSs) of the core terpene metabolic pathway functions as a terpene synthase (TPS), which converts the general intermediate (E,E)-farnesyl diphosphate (FPP) to the putative pheromone precursor (+)-(S,Z)-α-bisabolene in vitro and in protein lysates. A second identified IDS-type protein (NvFPPS) makes the TPS substrate (E,E)-FPP and functions as a bona fide FPP synthase. NvTPS is highly expressed in male epidermal tissue associated with the cuticle of ventral sternites, which is in agreement with the male specific release of the pheromone from glandular cells in this tissue. Our study supports findings of the function of similar TPS enzymes in the biosynthesis of aggregation pheromones from the pine engraver beetle Ips pini, the striped flea beetle Phyllotreta striolata, and the harlequin bug Murgantia histrionica, and hence provides growing evidence for the evolution of terpene de novo biosynthesis by IDS-type TPS families in insects.


Assuntos
Alquil e Aril Transferases/metabolismo , Heterópteros/enzimologia , Proteínas de Insetos/metabolismo , Atrativos Sexuais/metabolismo , Alquil e Aril Transferases/genética , Animais , Feminino , Cromatografia Gasosa-Espectrometria de Massas , Proteínas de Insetos/genética , Masculino , RNA/isolamento & purificação , RNA/metabolismo , Proteínas Recombinantes/biossíntese , Proteínas Recombinantes/genética , Atrativos Sexuais/química , Estereoisomerismo
9.
J Chem Ecol ; 45(2): 198, 2019 02.
Artigo em Inglês | MEDLINE | ID: mdl-30710237

RESUMO

The original version of this article unfortunately contained a mistake. Under the heading "Insects" in "Methods and Materials" the sentence "A colony of N. viridula originated with field collections near Tifton, Georgia, USA" is incorrect.

10.
Plant J ; 90(4): 788-807, 2017 May.
Artigo em Inglês | MEDLINE | ID: mdl-28333395

RESUMO

Soil communities are diverse taxonomically and functionally. This ecosystem experiences highly complex networks of interactions, but may also present functionally independent entities. Plant roots, a metabolically active hotspot in the soil, take an essential part in below-ground interactions. While plants are known to release an extremely high portion of the fixated carbon to the soil, less information is known about the composition and role of C-containing compounds in the rhizosphere, in particular those involved in chemical communication. Specialized metabolites (or secondary metabolites) produced by plants and their associated microbes have a critical role in various biological activities that modulate the behavior of neighboring organisms. Thus, elucidating the chemical composition and function of specialized metabolites in the rhizosphere is a key element in understanding interactions in this below-ground environment. Here, we review key classes of specialized metabolites that occur as mostly non-volatile compounds in root exudates or are emitted as volatile organic compounds (VOCs). The role of these metabolites in below-ground interactions and response to nutrient deficiency, as well as their tissue and cell type-specific biosynthesis and release are discussed in detail.


Assuntos
Raízes de Plantas/metabolismo , Raízes de Plantas/microbiologia , Rizosfera , Ecossistema , Plantas/metabolismo , Plantas/microbiologia , Compostos Orgânicos Voláteis/metabolismo
11.
New Phytol ; 220(3): 739-749, 2018 11.
Artigo em Inglês | MEDLINE | ID: mdl-28256726

RESUMO

Chemical communication is ubiquitous. The identification of conserved structural elements in visual and acoustic communication is well established, but comparable information on chemical communication displays (CCDs) is lacking. We assessed the phenotypic integration of CCDs in a meta-analysis to characterize patterns of covariation in CCDs and identified functional or biosynthetically constrained modules. Poorly integrated plant CCDs (i.e. low covariation between scent compounds) support the notion that plants often utilize one or few key compounds to repel antagonists or to attract pollinators and enemies of herbivores. Animal CCDs (mostly insect pheromones) were usually more integrated than those of plants (i.e. stronger covariation), suggesting that animals communicate via fixed proportions among compounds. Both plant and animal CCDs were composed of modules, which are groups of strongly covarying compounds. Biosynthetic similarity of compounds revealed biosynthetic constraints in the covariation patterns of plant CCDs. We provide a novel perspective on chemical communication and a basis for future investigations on structural properties of CCDs. This will facilitate identifying modules and biosynthetic constraints that may affect the outcome of selection and thus provide a predictive framework for evolutionary trajectories of CCDs in plants and animals.


Assuntos
Evolução Biológica , Vias Biossintéticas , Animais , Fenótipo , Compostos Orgânicos Voláteis/metabolismo
12.
Plant Cell ; 27(3): 874-90, 2015 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-25724638

RESUMO

Plant-derived volatile compounds such as terpenes exhibit substantial structural variation and serve multiple ecological functions. Despite their structural diversity, volatile terpenes are generally produced from a small number of core 5- to 20-carbon intermediates. Here, we present unexpected plasticity in volatile terpene biosynthesis by showing that irregular homo/norterpenes can arise from different biosynthetic routes in a tissue specific manner. While Arabidopsis thaliana and other angiosperms are known to produce the homoterpene (E)-4,8-dimethyl-1,3,7-nonatriene (DMNT) or its C16-analog (E,E)-4,8,12-trimethyl-1,3,7,11-tridecatetraene by the breakdown of sesquiterpene and diterpene tertiary alcohols in aboveground tissues, we demonstrate that Arabidopsis roots biosynthesize DMNT by the degradation of the C30 triterpene diol, arabidiol. The reaction is catalyzed by the Brassicaceae-specific cytochrome P450 monooxygenase CYP705A1 and is transiently induced in a jasmonate-dependent manner by infection with the root-rot pathogen Pythium irregulare. CYP705A1 clusters with the arabidiol synthase gene ABDS, and both genes are coexpressed constitutively in the root stele and meristematic tissue. We further provide in vitro and in vivo evidence for the role of the DMNT biosynthetic pathway in resistance against P. irregulare. Our results show biosynthetic plasticity in DMNT biosynthesis in land plants via the assembly of triterpene gene clusters and present biochemical and genetic evidence for volatile compound formation via triterpene degradation in plants.


Assuntos
Arabidopsis/metabolismo , Arabidopsis/microbiologia , Vias Biossintéticas , Raízes de Plantas/metabolismo , Terpenos/metabolismo , Triterpenos/metabolismo , Compostos Orgânicos Voláteis/metabolismo , Arabidopsis/genética , Cromatografia Gasosa , Regulação da Expressão Gênica de Plantas , Genes de Plantas , Espectrometria de Massas , Simulação de Acoplamento Molecular , Especificidade de Órgãos , Raízes de Plantas/genética , Raízes de Plantas/microbiologia , Pythium/crescimento & desenvolvimento , Pythium/fisiologia , Saccharomyces cerevisiae/metabolismo , Especificidade por Substrato , Triterpenos/química
13.
Plant J ; 83(6): 1046-58, 2015 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-26234706

RESUMO

Plant roots secrete a significant portion of their assimilated carbon into the rhizosphere. The putative sugar transporter SWEET2 is highly expressed in Arabidopsis roots. Expression patterns of SWEET2-ß-glucuronidase fusions confirmed that SWEET2 accumulates highly in root cells and thus may contribute to sugar secretion, specifically from epidermal cells of the root apex. SWEET2-green fluorescent protein fusions localized to the tonoplast, which engulfs the major sugar storage compartment. Functional analysis of SWEET2 activity in yeast showed low uptake activity for the glucose analog 2-deoxyglucose, consistent with a role in the transport of glucose across the tonoplast. Loss-of-function sweet2 mutants showed reduced tolerance to excess glucose, lower glucose accumulation in leaves, and 15-25% higher glucose-derived carbon efflux from roots, suggesting that SWEET2 has a role in preventing the loss of sugar from root tissue. SWEET2 root expression was induced more than 10-fold during Pythium infection. Importantly, sweet2 mutants were more susceptible to the oomycete, showing impaired growth after infection. We propose that root-expressed vacuolar SWEET2 modulates sugar secretion, possibly by reducing the availability of glucose sequestered in the vacuole, thereby limiting carbon loss to the rhizosphere. Moreover, the reduced availability of sugar in the rhizosphere due to SWEET2 activity contributes to resistance to Pythium.


Assuntos
Proteínas de Arabidopsis/metabolismo , Arabidopsis/fisiologia , Proteínas de Transporte de Monossacarídeos/metabolismo , Doenças das Plantas/microbiologia , Raízes de Plantas/metabolismo , Pythium/patogenicidade , Arabidopsis/microbiologia , Proteínas de Arabidopsis/genética , Sequestro de Carbono , Regulação da Expressão Gênica de Plantas , Glucose/metabolismo , Proteínas de Fluorescência Verde/genética , Proteínas de Fluorescência Verde/metabolismo , Interações Hospedeiro-Patógeno , Proteínas de Transporte de Monossacarídeos/genética , Folhas de Planta/metabolismo , Raízes de Plantas/microbiologia , Plantas Geneticamente Modificadas , Vacúolos/metabolismo
14.
Plant Cell ; 25(3): 1108-25, 2013 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-23512856

RESUMO

Secondary metabolites are major constituents of plant defense against herbivore attack. Relatively little is known about the cell type-specific formation and antiherbivore activities of secondary compounds in roots despite the substantial impact of root herbivory on plant performance and fitness. Here, we describe the constitutive formation of semivolatile diterpenes called rhizathalenes by the class I terpene synthase (TPS) 08 in roots of Arabidopsis thaliana. The primary enzymatic product of TPS08, rhizathalene A, which is produced from the substrate all-trans geranylgeranyl diphosphate, represents a so far unidentified class of tricyclic diterpene carbon skeletons with an unusual tricyclic spiro-hydrindane structure. Protein targeting and administration of stable isotope precursors indicate that rhizathalenes are biosynthesized in root leucoplasts. TPS08 expression is largely localized to the root stele, suggesting a centric and gradual release of its diterpene products into the peripheral root cell layers. We demonstrate that roots of Arabidopsis tps08 mutant plants, grown aeroponically and in potting substrate, are more susceptible to herbivory by the opportunistic root herbivore fungus gnat (Bradysia spp) and suffer substantial removal of peripheral tissue at larval feeding sites. Our work provides evidence for the in vivo role of semivolatile diterpene metabolites as local antifeedants in belowground direct defense against root-feeding insects.


Assuntos
Alquil e Aril Transferases/química , Arabidopsis/enzimologia , Diterpenos/química , Herbivoria/fisiologia , Raízes de Plantas/enzimologia , Compostos de Espiro/química , Animais , Arabidopsis/química , Arabidopsis/efeitos dos fármacos , Arabidopsis/fisiologia , Cultura Axênica , Ciclopentanos/farmacologia , Dípteros/fisiologia , Diterpenos/imunologia , Diterpenos/isolamento & purificação , Larva/fisiologia , Estrutura Molecular , Oxilipinas/farmacologia , Células Vegetais/química , Células Vegetais/enzimologia , Imunidade Vegetal , Raízes de Plantas/química , Plastídeos/química , Fosfatos de Poli-Isoprenil/química , Compostos de Espiro/imunologia , Compostos de Espiro/isolamento & purificação , Compostos Orgânicos Voláteis/química
15.
Proc Natl Acad Sci U S A ; 110(23): 9559-64, 2013 Jun 04.
Artigo em Inglês | MEDLINE | ID: mdl-23671085

RESUMO

The jasmonate family of phytohormones plays central roles in plant development and stress acclimation. However, the architecture of their signaling circuits remains largely unknown. Here we describe a jasmonate family binding protein, cyclophilin 20-3 (CYP20-3), which regulates stress-responsive cellular redox homeostasis. (+)-12-Oxo-phytodienoic acid (OPDA) binding promotes CYP20-3 to form a complex with serine acetyltransferase 1, which triggers the formation of a hetero-oligomeric cysteine synthase complex with O-acetylserine(thiol)lyase B in chloroplasts. The cysteine synthase complex formation then activates sulfur assimilation that leads to increased levels of thiol metabolites and the buildup of cellular reduction potential. The enhanced redox capacity in turn coordinates the expression of a subset of OPDA-responsive genes. Thus, we conclude that CYP20-3 is a key effector protein that links OPDA signaling to amino acid biosynthesis and cellular redox homeostasis in stress responses.


Assuntos
Cloroplastos/metabolismo , Ciclofilinas/metabolismo , Ácidos Graxos Insaturados/metabolismo , Homeostase/fisiologia , Estresse Oxidativo/fisiologia , Transdução de Sinais/fisiologia , Aminoácidos/biossíntese , Arabidopsis , Cromatografia de Afinidade , Ciclopentanos/metabolismo , Oxirredução , Oxilipinas/metabolismo , Mapas de Interação de Proteínas , Serina O-Acetiltransferase/metabolismo
16.
PLoS Genet ; 8(2): e1002506, 2012 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-22346763

RESUMO

For self-pollinating plants to reproduce, male and female organ development must be coordinated as flowers mature. The Arabidopsis transcription factors AUXIN RESPONSE FACTOR 6 (ARF6) and ARF8 regulate this complex process by promoting petal expansion, stamen filament elongation, anther dehiscence, and gynoecium maturation, thereby ensuring that pollen released from the anthers is deposited on the stigma of a receptive gynoecium. ARF6 and ARF8 induce jasmonate production, which in turn triggers expression of MYB21 and MYB24, encoding R2R3 MYB transcription factors that promote petal and stamen growth. To understand the dynamics of this flower maturation regulatory network, we have characterized morphological, chemical, and global gene expression phenotypes of arf, myb, and jasmonate pathway mutant flowers. We found that MYB21 and MYB24 promoted not only petal and stamen development but also gynoecium growth. As well as regulating reproductive competence, both the ARF and MYB factors promoted nectary development or function and volatile sesquiterpene production, which may attract insect pollinators and/or repel pathogens. Mutants lacking jasmonate synthesis or response had decreased MYB21 expression and stamen and petal growth at the stage when flowers normally open, but had increased MYB21 expression in petals of older flowers, resulting in renewed and persistent petal expansion at later stages. Both auxin response and jasmonate synthesis promoted positive feedbacks that may ensure rapid petal and stamen growth as flowers open. MYB21 also fed back negatively on expression of jasmonate biosynthesis pathway genes to decrease flower jasmonate level, which correlated with termination of growth after flowers have opened. These dynamic feedbacks may promote timely, coordinated, and transient growth of flower organs.


Assuntos
Arabidopsis/crescimento & desenvolvimento , Arabidopsis/genética , Flores/crescimento & desenvolvimento , Flores/genética , Redes Reguladoras de Genes/genética , Proteínas de Arabidopsis/genética , Proteínas de Arabidopsis/metabolismo , Ciclopentanos/metabolismo , Proteínas de Ligação a DNA/genética , Proteínas de Ligação a DNA/metabolismo , Regulação da Expressão Gênica de Plantas , Mutação , Oxilipinas/metabolismo , Fenótipo , Néctar de Plantas/genética , Plantas Geneticamente Modificadas/genética , Pólen/genética , Pólen/crescimento & desenvolvimento , Sesquiterpenos/metabolismo , Transdução de Sinais , Fatores de Transcrição/genética , Fatores de Transcrição/metabolismo
17.
Plant Cell ; 23(5): 1729-40, 2011 May.
Artigo em Inglês | MEDLINE | ID: mdl-21602291

RESUMO

MicroRNAs (miRNAs) play essential roles in plant and animal development, but the cause and effect of miRNA expression divergence between closely related species and in interspecific hybrids or allopolyploids are unknown. Here, we show differential regulation of a miR163-mediated pathway in allotetraploids and their progenitors, Arabidopsis thaliana and Arabidopsis arenosa. miR163 is a recently evolved miRNA in A. thaliana and highly expressed in A. thaliana, but its expression was undetectable in A. arenosa and repressed in resynthesized allotetraploids. Repression of A. arenosa MIR163 (Aa MIR163) is caused by a weak cis-acting promoter and putative trans-acting repressor(s) present in A. arenosa and allotetraploids. Moreover, ectopic Aa MIR163 precursors were processed more efficiently in A. thaliana than in resynthesized allotetraploids, suggesting a role of posttranscriptional regulation in mature miR163 abundance. Target genes of miR163 encode a family of small molecule methyltransferases involved in secondary metabolite biosynthetic pathways that are inducible by a fungal elicitor, alamethicin. Loss of miR163 or overexpression of miR163 in mir163 mutant plants alters target transcript and secondary metabolite profiles. We suggest that cis- and trans-regulation of miRNA and other genes provides a molecular basis for natural variation of biochemical and metabolic pathways that are important to growth vigor and stress responses in Arabidopsis-related species and allopolyploids.


Assuntos
Proteínas de Arabidopsis/genética , Arabidopsis/genética , Regulação da Expressão Gênica de Plantas/genética , Metiltransferases/metabolismo , MicroRNAs/genética , Regiões Promotoras Genéticas/genética , Alameticina/farmacologia , Arabidopsis/crescimento & desenvolvimento , Arabidopsis/metabolismo , Proteínas de Arabidopsis/metabolismo , DNA Complementar/genética , Epigênese Genética , Ácidos Graxos Insaturados/metabolismo , Transferência Genética Horizontal , Genes de Plantas/genética , Genoma de Planta/genética , Metiltransferases/efeitos dos fármacos , Metiltransferases/genética , Mutagênese Insercional , Folhas de Planta/genética , Folhas de Planta/metabolismo , Poliploidia , RNA de Plantas/genética , Análise de Sequência de DNA , Especificidade da Espécie , Estresse Fisiológico
18.
J Chem Ecol ; 39(7): 810-25, 2013 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-23881446

RESUMO

Microorganisms colonize the surfaces of plant roots, leaves, and flowers known as the rhizosphere, phyllosphere, and anthosphere. These spheres differ largely in a number of factors that may determine the ability of microbes to establish themselves and to grow in these habitats. In this article, we focus on volatile organic compounds (VOCs) emitted by plants, and we discuss their effects on microbial colonizers, with an emphasis on bacteria. We present examples of how growth-inhibiting properties and mechanisms of VOCs such as terpenoids, benzenoid compounds, aliphatics, and sulfur containing compounds prevent bacterial colonization at different spheres, in antagonism with their role as carbon-sources that support the growth of different bacterial taxa. The notion that VOCs represent important factors that define bacterial niches is further supported by results for representatives of two bacterial genera that occupy strongly diverging niches based on scent emissions of different plant species and organs. Bacteria are known to either positively or negatively affect plant fitness and to interfere with plant-animal interactions. Thus, bacteria and other microbes may select for VOCs, enabling plants to control microbial colonizers on their surfaces, thereby promoting the growth of mutualists and preventing the establishment of detrimental microbes.


Assuntos
Magnoliopsida/microbiologia , Compostos Orgânicos Voláteis/metabolismo , Animais , Ecossistema , Magnoliopsida/metabolismo
19.
Proc Natl Acad Sci U S A ; 107(49): 21205-10, 2010 Dec 07.
Artigo em Inglês | MEDLINE | ID: mdl-21088219

RESUMO

Terpene volatiles play important roles in plant-organism interactions as attractants of pollinators or as defense compounds against herbivores. Among the most common plant volatiles are homoterpenes, which are often emitted from night-scented flowers and from aerial tissues upon herbivore attack. Homoterpene volatiles released from herbivore-damaged tissue are thought to contribute to indirect plant defense by attracting natural enemies of pests. Moreover, homoterpenes have been demonstrated to induce defensive responses in plant-plant interaction. Although early steps in the biosynthesis of homoterpenes have been elucidated, the identity of the enzyme responsible for the direct formation of these volatiles has remained unknown. Here, we demonstrate that CYP82G1 (At3g25180), a cytochrome P450 monooxygenase of the Arabidopsis CYP82 family, is responsible for the breakdown of the C(20)-precursor (E,E)-geranyllinalool to the insect-induced C(16)-homoterpene (E,E)-4,8,12-trimethyltrideca-1,3,7,11-tetraene (TMTT). Recombinant CYP82G1 shows narrow substrate specificity for (E,E)-geranyllinalool and its C(15)-analog (E)-nerolidol, which is converted to the respective C(11)-homoterpene (E)-4,8-dimethyl-1,3,7-nonatriene (DMNT). Homology-based modeling and substrate docking support an oxidative bond cleavage of the alcohol substrate via syn-elimination of the polar head, together with an allylic C-5 hydrogen atom. CYP82G1 is constitutively expressed in Arabidopsis stems and inflorescences and shows highly coordinated herbivore-induced expression with geranyllinalool synthase in leaves depending on the F-box protein COI-1. CYP82G1 represents a unique characterized enzyme in the plant CYP82 family with a function as a DMNT/TMTT homoterpene synthase.


Assuntos
Proteínas de Arabidopsis/metabolismo , Sistema Enzimático do Citocromo P-450/metabolismo , Terpenos/metabolismo , Compostos Orgânicos Voláteis/metabolismo , Animais , Flores/química , Insetos , Especificidade por Substrato , Ativação Transcricional
20.
J Econ Entomol ; 106(1): 283-8, 2013 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-23448042

RESUMO

Harlequin bug, Murgantia histrionica (Hahn) (Hemiptera: Pentatomidae), is a piercing-sucking pest of cole crops, causing cosmetic damage in low populations, while heavy pest pressure can kill plants or entire fields. Field studies were conducted to evaluate a trap crop for control of harlequin bug in collard. Field-cage choice tests found that potential trap crop plant species, mustard (Brassica juncea 'Southern Giant Curled'), rapeseed (B. napus 'Athena'), rapini (B. rapa), and arugula (Eruca satica) attracted more harlequin bugs than collard (B. oleracea 'Champion') and a nonbrassica control, bean (Phaseolus vulgaris'Bronco'). Mustard was the most consistently selected by harlequin bug over collard in choice tests, and was found to be an effective trap crop for reducing feeding injury on collard at two experimental sites. Augmentation of the mustard trap crop with a systemic, neonicotinoid insecticide provided no added control of harlequin bug for the 10 wk duration in the spring season.


Assuntos
Brassica/parasitologia , Hemípteros , Herbivoria , Especificidade de Hospedeiro , Controle de Insetos/métodos , Animais , Preferências Alimentares , Oviposição
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