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1.
Anal Chem ; 96(4): 1781-1788, 2024 01 30.
Artigo em Inglês | MEDLINE | ID: mdl-38214113

RESUMO

Efficient, accurate, and economical detection of pathogenic bacteria is crucial in ensuring food safety and preventing foodborne illnesses. How to fulfill the highly sensitive and simultaneous detection of multiple trace pathogenic bacteria is a big challenge. In this work, capillary electrophoresis coupled with a cyclic multiple primer generation rolling circle amplification (cyclic MPG-RCA) was studied for highly sensitive and simultaneous detection of three kinds of pathogenic bacteria. The cyclic MPG-RCA was based on a carefully designed clover-shaped DNA probe, in which three "leaves" corresponded to three types of aimed pathogenic bacteria: Shigella dysenteriae (S. dysenteriae), Salmonella enterica subsp. enterica serovar Typhi (S. Typhi), and Vibrio parahaemolyticus (V. parahaemolyticus). Under the optimal experimental conditions, the limits of detection (S/N = 3) of this method for bacterial target DNA were 11.4 amol·L-1 (S. dysenteriae), 4.88 amol·L-1 (S. Typhi), and 14.9 amol·L-1 (V. parahaemolyticus), and the conversion concentrations for the target bacteria were 10 colony-forming units (CFU)·mL-1 (S. dysenteriae), 3 CFU·mL-1 (S. Typhi), and 12 CFU·mL-1 (V. parahaemolyticus). This method had been applied to the detection of tap water samples with good results, which proved that it could be used as an effective tool for trace pathogenic bacteria monitoring in foods, environments, and medicines.


Assuntos
Bactérias , Vibrio parahaemolyticus , Salmonella , Vibrio parahaemolyticus/genética , Eletroforese Capilar
2.
Cell Mol Biol (Noisy-le-grand) ; 69(3): 182-190, 2023 Mar 31.
Artigo em Inglês | MEDLINE | ID: mdl-37300669

RESUMO

To explore the effects of unconventional feed combinations on the growth and production, digestion and metabolism, and rumen fermentation of dairy cows, three different dairy cows were selected for the experiment. They are Holstein cows with permanent rumen fistula, 3 primiparous cows and 6 multiparous cows. The cow diet was prepared according to the ratio of 0% CGF, 7% CGF and 11% CGF. Part of alfalfa hay in the conventional diet was replaced by CGF and Leymus chinensis. The study analyzed the feed intake, digestibility, lactation performance, blood biochemical indicators, rumen degradation parameters, rumen microorganisms and other indicators of dairy cows. The nutritional composition, digestible nutrients and absorbable protein content of CGF, L. chinensis and alfalfa hay were verified. The feed economic benefits of different unconventional feed combinations were also investigated. The protein small intestine digestibility of CGF was higher than that of alfalfa hay. tdFA, NEm, NEg, and DEp were significantly higher than those of L. chinensis and alfalfa hay (P<0.05). Under the three CGF ratios, the nutrient intake and digestibility of the CGF-11% group were the highest (P<0.05). The S, Kd dry matter degradation rate and crude protein degradation rate of the CGF-11% group were significantly higher than those of the CGF-0% group and CGF-7% group (P<0.05). The CGF-11% group had the highest total output value and economic benefits, 119.057 ¥/d and 68.62 ¥/d respectively. To sum up, it was feasible to use the combination of CGF and L. chinensis to replace part of alfalfa hay in cow feed. This method could effectively promote rumen degradation and nutrient absorption in dairy cows. And it can improve the production and economic benefits of dairy farming. This is of great value for adjusting the structure of aquaculture feed in China.


Assuntos
Leite , Rúmen , Feminino , Bovinos , Animais , Leite/metabolismo , Rúmen/metabolismo , Lactação , Ração Animal/análise , Fermentação , Digestão , Dieta/veterinária , Zea mays
3.
Anal Chem ; 94(41): 14434-14442, 2022 10 18.
Artigo em Inglês | MEDLINE | ID: mdl-36195559

RESUMO

Home potentiometric sensing devices can real-time monitor personal health status and are widely used in the prevention and management of related diseases. However, variations in the composition and the pH of the sample matrix tend to change the basic potential and response slope of some potentiometric sensors, thus affecting detection reliability. Therefore, this work uses the detection of urea in urine as a model to improve reliability of the potentiometric sensor in home detection. Au@urease nanoparticles were synthesized as the sensing material to improve the stability of the urease-based potentiometric sensor. Meanwhile, a multicalibrated urea potential (MCUP) sensing array was designed, which consists of a urea electrode group, a pH electrode group, and a reference channel. The urea electrode group and the pH electrode group contain respectively a sensing channel and a calibration channel. The basic potential of sensing channels can be calibrated through the corresponding calibration channels. Moreover, the pH electrode group can not only measure the pH values of the samples but also calibrate the response slope of the urea electrode group through the calibration coefficient, thus improving the reliability of home detection. Consequently, the potentiometric sensing array based on the enzyme reaction can be applied in body fluids with a wide pH range.


Assuntos
Técnicas Biossensoriais , Nanopartículas , Materiais Inteligentes , Enzimas Imobilizadas/química , Reprodutibilidade dos Testes , Ureia/química , Urease/química
4.
Anal Chem ; 93(7): 3551-3558, 2021 02 23.
Artigo em Inglês | MEDLINE | ID: mdl-33570925

RESUMO

Current strand displacement amplification (SDA)-based nucleic acid sensing methods generally rely on a ssDNA template that involves complementary bases to the endonuclease recognition sequence, which has the limitation of detecting only short nucleic acids. Herein, a new SDA method in which the defective T junction structure is first used to support SDA (dT-SDA) was proposed and applied in longer DNA detection. In dT-SDA, an auxiliary probe and a primer were designed to specifically identify the target gene, following the formation of a stable defective T junction structure through proximity hybridization, and the formation of defective T junctions could further trigger cascade SDA cycling to produce numerous ssDNA products. The quantity of these ssDNA products was detected through microchip electrophoresis (MCE) and could be transformed to the concentration of the target gene. Moreover, the applicability of this developed strategy in detecting long genomic DNA was verified by detecting bacterial 16S rDNA. This proposed dT-SDA strategy consumes less time and has satisfactory sensitivity, which has great potential for effective bacterial screening and infection diagnosis.


Assuntos
Eletroforese em Microchip , Ácidos Nucleicos , DNA Ribossômico/genética , Técnicas de Amplificação de Ácido Nucleico , Hibridização de Ácido Nucleico
5.
Analyst ; 146(23): 7257-7264, 2021 Nov 22.
Artigo em Inglês | MEDLINE | ID: mdl-34734932

RESUMO

Here, an Au-Cu dual-electrode tip was designed to monitor the effect of Cu2+ on the membrane permeability of a single living cell in situ using scanning electrochemical microscopy. The probe approach curves (PACs) were obtained using potassium ferricyanide as a redox mediator. Meanwhile, according to the simulation, theoretical PACs could be acquired. Thus, the cell membrane permeability coefficient (Pm) values were obtained by overlapping the experimental PACs with the theoretical values. Cu2+ was directly generated by electrolyzing the Cu electrode of the dual-electrode tip to investigate its effect on the cell membrane permeability in situ. This work has potential value to improve the understanding of the mechanism of acute heavy metal damage on the cell membrane and will also help clarify the role of heavy metal ions in physiological or pathological processes.


Assuntos
Microscopia Eletroquímica de Varredura , Permeabilidade da Membrana Celular , Eletrodos , Oxirredução , Permeabilidade
6.
Mikrochim Acta ; 188(2): 39, 2021 01 12.
Artigo em Inglês | MEDLINE | ID: mdl-33433669

RESUMO

The detection of Staphylococcus aureus specific gene in combination with the mecA gene is vitally important for accurate identification of methicillin-resistant Staphylococcus aureus (MRSA). A homogeneous electrochemical DNA sensor was fabricated for simultaneous detection of mecA and nuc gene in MRSA. Metal-organic framework (type UiO-66-NH2) was applied as nanocarrier. Two electroactive dyes, methylene blue (MB) and epirubicin (EP), were encapsulated in UiO-66-NH2, respectively, and were locked by the hybrid double-stranded DNA. Based on the target-response electroactive dye release strategy, once target DNA exists, it completely hybridizes with displacement DNA (DEP and DMB). So DEP and DMB is displaced from the MOF surface, causing the release of electroactive dyes. Co-Zn bimetallic zeolitic imidazolate framework-derived N-doped porous carbon serves for electrode modification to improve electrocatalytic performance and sensitivity. The differential pulse voltammetry peak currents of MB and EP were accurately detected at - 0.14 V and - 0.53 V versus the Ag/AgCl reference electrode, respectively. Under the optimal conditions, the detection limits of mecA gene and nuc gene were 3.7 fM and 1.6 fM, respectively. Combining the effective application of MOFs and the homogeneous detection strategy, the sensor exhibited satisfactory performance for MRSA identification in real samples. The recovery was 92.6-103%, and the relative standard deviation was less than 5%. Besides, MRSA and SA can also be distinguished. This sensor has great potential in practical applications.


Assuntos
Carbono/química , DNA Bacteriano/análise , Técnicas Eletroquímicas/métodos , Ácidos Nucleicos Imobilizados/química , Estruturas Metalorgânicas/química , Staphylococcus aureus Resistente à Meticilina/química , Animais , Proteínas de Bactérias/genética , Técnicas Biossensoriais/instrumentação , Técnicas Biossensoriais/métodos , Corantes/química , DNA Bacteriano/química , DNA Bacteriano/genética , Água Potável/análise , Água Potável/microbiologia , Técnicas Eletroquímicas/instrumentação , Eletrodos , Epirubicina/química , Ácidos Nucleicos Imobilizados/genética , Limite de Detecção , Azul de Metileno/química , Nuclease do Micrococo/genética , Leite/microbiologia , Hibridização de Ácido Nucleico , Compostos Organometálicos/química , Proteínas de Ligação às Penicilinas/genética , Ácidos Ftálicos/química , Reprodutibilidade dos Testes
7.
Anal Bioanal Chem ; 412(15): 3737-3743, 2020 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-32363560

RESUMO

Extracellular pH can indicate the variation in organelle function and cell state. It is important to measure extracellular pH (pHe) with a controllable distance. In this work, a potentiometric SECM dual-microelectrode was developed to monitor the pHe of MCF-7 cells under electrical stimulation. The distance between the dual-microelectrode and the cells was determined first with a gold microelectrode by recording the approaching curve, and the pH was determined using an open-circuit potential (OCP) technique with a polyaniline-modified Pt microelectrode. The pH microelectrode showed a response slope of 53.0 ± 0.4 mV/pH and good reversibility from pH 4 to pH 8, fast response within 10 s, and a potential drift of 1.13% for 3 h, and thus was employed to monitor the pHe of stimulated cells. The value of pHe decreased with the decrease in the distance to cells, likely due to the release of H+. With an increase in the stimulation potential or time, the pHe value decreased, as the cell membrane became more permeable, which was verified by fluorescence staining of calcein-AM/PI (propidium iodide). Based on these results, this method can be widely applied for determining the species released by biosystems at a controllable position.


Assuntos
Técnicas Biossensoriais/instrumentação , Espaço Extracelular/química , Potenciometria/instrumentação , Neoplasias da Mama/química , Estimulação Elétrica , Feminino , Humanos , Concentração de Íons de Hidrogênio , Células MCF-7 , Microeletrodos
8.
Mikrochim Acta ; 187(7): 415, 2020 06 30.
Artigo em Inglês | MEDLINE | ID: mdl-32607635

RESUMO

An electrochemical sensor based on dual functional Cu2+-modified metal-organic framework nanoparticles (Cu2+-NMOFs) for sensitive detection of bacterial lipopolysaccharide (LPS) is reported. Cu2+-NMOFs were prepared and characterized by SEM, EDS, XRD, and XPS. In this LPS sensor, LPS firstly immobilized in gold nanoparticles/reduced graphene oxide by C18 alkane thiol chains, since the LPS can interact with the C18 alkyl chains by strong intermolecular interactions. Then the Cu2+-NMOFs were captured by the anionic groups of the carbohydrate portions of LPS molecules and played a vital role of recognition unit. More importantly, the Cu2+-NMOFs can catalyze dopamine oxidation to generate aminochrome, resulting in a strong electrochemical oxidation signal. The electrochemical sensor based on dual functional Cu2+-NMOFs was investigated by differential pulse voltammetry, and the stripping peak currents of dopamine oxidized to aminochrome were used to monitor the level of LPS. The developed method demonstrated a wide linear range from 0.0015 to 750 ng/mL with a limit of detection of 6.1 × 10-4 ng/mL. The fabricated sensor was applied to detect LPS in mouse blood serum and satisfactory results were achieved. Compared to other detection schemes by using the LPS-binding proteins, peptides, and aptamer, the proposed LPS determination based on the catalytic peroxidase-mimicking NMOFs has some advantages such as good reproducibility, low detection limit, and excellent specificity. Graphical abstract An electrochemical sensor based on dual functional Cu2+-modified metal-organic framework was developed for detection of bacterial lipopolysaccharide. This sensor combined a metal ion-based target recognition and electrocatalytic detection, and provided a high sensitive strategy for detection of lipopolysaccharide.


Assuntos
Técnicas Eletroquímicas/métodos , Lipopolissacarídeos/sangue , Nanopartículas Metálicas/química , Estruturas Metalorgânicas/química , Animais , Cobre/química , Dopamina/química , Ouro/química , Grafite/química , Limite de Detecção , Masculino , Camundongos , Oxirredução , Reprodutibilidade dos Testes
9.
Electrophoresis ; 40(3): 425-430, 2019 02.
Artigo em Inglês | MEDLINE | ID: mdl-30033657

RESUMO

DNA methylation is a significant epigenetic modification and the methods for the detection of DNA methyltransferase (MTase) activity are important due to aberrant methylation closely related to the occurrence of cancer. In this study, a simple and rapid microchip electrophoresis (ME) coupled with LED-induced fluorescence (LEDIF) method was presented for the detection of Dam MTase activity. This strategy was based on methylation-sensitive endonuclease DpnⅡ which could recognize the same specific site 5'-GATC-3' with Dam MTase in double-stranded DNA (dsDNA). The adenines in the specific site could be methylated by Dam MTase, then the special site could not be digested by DpnⅡ. Both methylated dsDNA and unmethylated dsDNA could be analyzed by ME-LEDIF after stained by SYBR gold. The results showed the fluorescence intensities of methylated dsDNA were directly proportional to Dam MTase activities in the range of 0.5-20 U/mL with a detection limit of 0.12 U/mL. Furthermore, the method could successfully be applied to evaluation experiments of Dam MTase inhibitors. The results confirmed the ME-LEDIF method is a promising approach for inhibitors screening of DNA MTase and development of anticancer drugs.


Assuntos
Metilação de DNA/fisiologia , Desoxirribonucleases de Sítio Específico do Tipo II/metabolismo , Eletroforese em Microchip/métodos , DNA Metiltransferases Sítio Específica (Adenina-Específica) , Técnicas Biossensoriais/métodos , DNA/análise , DNA/química , DNA/metabolismo , Humanos , Limite de Detecção , DNA Metiltransferases Sítio Específica (Adenina-Específica)/análise , DNA Metiltransferases Sítio Específica (Adenina-Específica)/metabolismo
10.
Electrophoresis ; 40(9): 1331-1336, 2019 05.
Artigo em Inglês | MEDLINE | ID: mdl-30676663

RESUMO

The release of cytochrome C (Cyt C) plays an important role in apoptosis. In this study, selective and sensitive detection of Cyt C based on an aptamer strategy coupled with MCE was developed. Following the binding of a specific aptamer to Cyt C, the aptamer exhibited an irregular state, reducing the binding affinity of a fluorescent probe, and thus preventing the aptamer-Cyt C complexes from detection within the MCE. The height of the detection peak of the residual aptamer linearly decreased, and therefore, the difference in peak height of residual aptamer compared to that of the initial aptamer was used to quantify the captured protein concentration. Experimental conditions such as incubation time, pH, temperature, and ionic strength were optimized. A measurement of Cyt C concentration by MCE was achieved within 135 s, with a limit of detection as low as 0.4 nM. The proposed method has high selectivity and good stability for the detection of Cyt C. The experimental results demonstrate that this method is quick, consumes only a small quantity of sample, is highly selectivity and exhibits high sensitivity.


Assuntos
Aptâmeros de Nucleotídeos/química , Citocromos c/análise , Eletroforese em Microchip/métodos , Animais , Corantes Fluorescentes , Humanos , Limite de Detecção
11.
Respir Res ; 20(1): 50, 2019 Mar 06.
Artigo em Inglês | MEDLINE | ID: mdl-30841876

RESUMO

BACKGROUND: Macrophage migration inhibitory factor (MIF) makes chemokine-like functions and plays critical roles in various inflammatory diseases. This study was designed to explore the significance of MIF serum levels in predicting the prognosis of pulmonary tuberculosis (PTB) following anti-TB treatment. METHODS: Patients diagnosed with culture-confirmed PTB without treatment were included and the serum was collected. Levels of MIF in serum were quantified with immunoassay, and the levels of established biomarkers were also determined, including C-reactive protein (CRP) and Interleukin 6 (IL-6). The outcome was estimated with all-cause mortality, with the mortality in 12 months as the primary outcome and the mortality in 3, 6, 9 months as other outcomes. The prognostic value of MIF and other factors in PTB were tested. RESULTS: Two hundred eighty-seven PTB patients were included. The median MIF levels in patients with advanced disease, disseminated and drug-resistant TB were significantly higher than that observed in mild -to- moderate disease, non-disseminated and drug-sensitive TB. MIF levels in patients with the outcome of death were higher than those survived [28.0 ng/ml (Inter-quartile range [IQR]: 24.2-33.1) vs. 22.3 ng/ml (IQR: 18.7-26.5); P < 0.001]. Multivariate model analysis was performed for comparing the highest quartiles to the lowest quartile of MIF levels. MIF levels were related to the mortality, with an elevated mortality risk of 236% [Odds ratio (OR) = 3.36; 95% Confidence interval (CI): 1.21-15.14; P = 0.012]. The model was re-analysis after combing MIF with currently established risk indicators. The obtained Area Under the Receiver Operating Characteristic Curve (±standard error) was elevated from 0.81 (±0.035) to 0.84 (±0.031), with a significant difference before and after adding the MIF (difference, 0.03[0.004]; P = 0.03). CONCLUSION: Serum level of MIF was a better biomarker than CRP or IL-6 for predicting death in HIV-negative PTB patients, and increased MIF serum levels were related to higher mortality.


Assuntos
Oxirredutases Intramoleculares/sangue , Fatores Inibidores da Migração de Macrófagos/sangue , Tuberculose Pulmonar/sangue , Tuberculose Pulmonar/diagnóstico por imagem , Biomarcadores/sangue , Proteína C-Reativa/metabolismo , Estudos de Coortes , Feminino , Seguimentos , Humanos , Interleucina-6/sangue , Masculino , Pessoa de Meia-Idade , Prognóstico , Taxa de Sobrevida/tendências , Tuberculose Pulmonar/mortalidade
12.
Mikrochim Acta ; 186(9): 620, 2019 08 13.
Artigo em Inglês | MEDLINE | ID: mdl-31410576

RESUMO

An aptamer based assay is described for the determination of Salmonella typhimurium (S.typhimurium). A metal-organic framework-graphene composite of type UiO-67/GR is used as the substrate, and an aptamer-gold nanoparticles-horseradish peroxidase (Apt-AuNP-HRP) conjugate the signal amplification probe. A phosphate-terminal and partially complementary DNA (cDNA) of the aptamer is covalently bound to UiO-67/GR via the chemical complexation between phosphate and Zr-OH groups of UiO-67, and then S. typhimurium and cDNA will compete for the binding sites. The binding of Apt-AuNP-HRP to S.typhimurium leads to the formation of strong conjugates. The unbound signal probes then attach to the surface of a glassy carbon electrode via hybridization with cDNA. This generates a large current response (best measured at a potential as low as -0.02 V vs. saturated calomel electrode) under the catalytic action of HRP on the H2O2-hydroquinone system. Under the optimal conditions, the differential pulse voltammetric signal decreases linearly in the 2 × 101 - 2 × 108 cfu·mL-1 S.typhimurium concentration range, with a lower detection limit of 5 cfu·mL-1 (based on S/N = 3). The method was successfully applied to the detection of S. typhimurium in spiked milk samples. Graphical abstract Schematic presentation of electrochemical determination of Salmonella typhimurium (S.typhimurium). A metal-organic framework (type UiO-67) and graphene (GR) composite were used as substrate, and gold nanoparticles carrying horseradish peroxidase (HRP) for signal amplification. HQ: hydroquinone; cDNA: complementary DNA of aptamer.


Assuntos
Aptâmeros de Nucleotídeos/metabolismo , Técnicas Biossensoriais/métodos , Ouro/química , Grafite/química , Nanopartículas Metálicas/química , Estruturas Metalorgânicas/química , Salmonella typhimurium/isolamento & purificação , Animais , Aptâmeros de Nucleotídeos/genética , Sequência de Bases , Eletroquímica , Leite/microbiologia , Salmonella typhimurium/metabolismo
13.
Analyst ; 141(3): 1083-90, 2016 Feb 07.
Artigo em Inglês | MEDLINE | ID: mdl-26646316

RESUMO

A novel Congo red (CR) derivatized silica stationary phase was prepared and packed into a fused silica capillary tube for nano-flow HPLC. A variety of analytes including poly-aromatic hydrocarbons, parabens, acids, sulfonamides, bases, and nucleosides were successfully separated using the CR. In comparison with commercial ODS columns, this new stationary phase has a different separation mechanism (hydrophobically-assisted ion-exchange), which was evident in the separation of benzoic acid derivatives and sulfonamides. The successful application of CR-bonded silica stationary phase in the HILIC and PALC modes demonstrates the effectiveness of this potential chromatographic material in nano flow HPLC.


Assuntos
Cromatografia Líquida de Alta Pressão/métodos , Vermelho Congo/química , Nanotecnologia/métodos , Dióxido de Silício/química , Cromatografia de Fase Reversa , Interações Hidrofóbicas e Hidrofílicas , Troca Iônica
14.
Luminescence ; 29(6): 579-85, 2014 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-24115262

RESUMO

Based on the catalytic activity of hemin, an efficient biocatalyst, an indirect capillary electrophoresis-chemiluminescence (CE-CL) detection method for phenols using a hemin-luminol-hydrogen peroxide system was developed. Through a series of static injection experiments, hemin was found to perform best in a neutral solution rather than an acidic or alkaline medium. Although halide ions such as Br(-) and F(-) could further enhance the CL signal catalyzed by hemin, it is difficult to apply these conditions to this CE-CL detection system because of the self-polymerization of hemin, as it hinders the CE process. The addition of concentrated ammonium hydroxide to an aqueous/dimethyl sulfoxide solution of hemin-luminol afforded a stable CE-CL baseline. The indirect CE-CL detection of five phenols using this method gave the following limits of detections: 4.8 × 10(-8) mol/L (o-sec-butylphenol), 4.9 × 10(-8) mol/L (o-cresol), 5.4 × 10(-8) mol/L (m-cresol), 5.3 × 10(-8) mol/L (2,4-dichlorophenol) and 7.1 × 10(-8) mol/L (phenol).


Assuntos
Hemina/química , Luminescência , Fenóis/análise , Catálise , Eletroforese Capilar , Peróxido de Hidrogênio/química , Luminol/química
15.
Talanta ; 273: 125875, 2024 Jun 01.
Artigo em Inglês | MEDLINE | ID: mdl-38452591

RESUMO

Rapid and quantitative detection of foodborne bacteria is of great significance to public health. In this work, an aptamer-mediated double strand displacement amplification (SDA) strategy was first explored to couple with microchip electrophoresis (MCE) for rapid and ultrasensitive detection of Salmonella typhimurium (S. Typhimurium). In double-SDA, a bacteria-identified probe consisting of the aptamer (Apt) and trigger sequence (Tr) was ingeniously designed. The aptamer showed high affinity to the S. Typhimurium, releasing the Tr sequence from the probe. The released Tr hybridized with template C1 chain, initiating the first SDA to produce numerous output strands (OS). The second SDA process was induced with the hybridization of the liberated OS and template C2 sequence, generating a large number of reporter strands (RS), which were separated and quantified through MCE. Cascade signal amplification and rapid separation of nucleic acids could be realized by the proposed double-SDA method with MCE, achieving the limit of detection for S. typhimurium down to 6 CFU/mL under the optimal conditions. Based on the elaborate design of the probes, the double-SDA assisted MCE strategy achieved better amplification performance, showing high separation efficiency and simple operation, which has satisfactory expectation for bacterial disease diagnosis.


Assuntos
Aptâmeros de Nucleotídeos , Técnicas Biossensoriais , Eletroforese em Microchip , Ácidos Nucleicos , Salmonella typhimurium/genética , Eletroforese em Microchip/métodos , Aptâmeros de Nucleotídeos/genética , Hibridização de Ácido Nucleico , Bactérias , Técnicas de Amplificação de Ácido Nucleico , Técnicas Biossensoriais/métodos , Limite de Detecção
16.
J Chromatogr A ; 1730: 465087, 2024 Aug 16.
Artigo em Inglês | MEDLINE | ID: mdl-38889586

RESUMO

MicroRNAs (miRNAs) are increasingly recognized as potential biomarkers for the early diagnosis of cancer. However, the concurrent detection of multiple miRNAs in biological samples presents a significant challenge due to their high homogeneity and low abundance. This study introduced a novel approach combining strand displacement amplification (SDA) with microchip electrophoresis (MCE) for the simultaneous quantitation of trace levels of three miRNAs associated with cancer: miRNA-21, miRNA-145, and miRNA-221. Specifically designed probes were utilized to selectively capture the target miRNAs, thereby initiating the SDA process in a single solution without cross-interference. Under optimized conditions, the SDA-MCE method achieved the limit of detection (LOD) as low as 0.02 fM (S/N = 3) and the limit of quantitation (LOQ) as low as 0.1 fM across a broad linear range spanning from 0.1 fM to 1 pM. The SDA reaction was completed in approximately 1.5 h, and all target products were separated within 135 s through MCE. Application of this method for the simultaneous detection of these three miRNAs in human lung cancer cell samples yielded satisfactory results. Featuring high sensitivity, rapid analysis, minimal reagent consumption, and straightforward operation, the proposed MCE-SDA strategy holds considerable promise for multi-miRNAs detection applications.


Assuntos
Eletroforese em Microchip , Limite de Detecção , MicroRNAs , Técnicas de Amplificação de Ácido Nucleico , MicroRNAs/análise , Eletroforese em Microchip/métodos , Humanos , Técnicas de Amplificação de Ácido Nucleico/métodos , Linhagem Celular Tumoral , Neoplasias Pulmonares/genética
17.
Anal Chim Acta ; 1300: 342469, 2024 Apr 29.
Artigo em Inglês | MEDLINE | ID: mdl-38521570

RESUMO

More and more studies have found that microRNAs (miRNAs) are markers of cancer, and detection of miRNAs is beneficial for early diagnosis and prognosis of cancer. In this paper, the isothermal strand displacement polymerase reaction (ISDPR), which is an enzyme-assisted nucleic acid amplification method, was studied to combine with microchip electrophoresis (MCE) for a simultaneously detection of two cancer related miRNAs named microRNA-21 (miR-21) and microRNA-221 (miR-221). In the ISDPR amplification, two different DNA hairpins (HPs) were specifically designed, so that miR-21 and miR-221 could respectively bind to HPs and started ISDPR amplification to generate two different products which were ultimately detected by MCE. The optimal conditions of ISDPR were carefully investigated, and the limits of detection (LOD) of miR-21 and miR-221 were as low as 0.35 fM and 0.25 fM (S/N = 3) respectively under these conditions. The human lung tumor cells and serum samples were analyzed by this ISDPR-MCE method and satisfactory results were obtained, which means that this method is of high sensitivity, high efficiency, low reagent consumption and simple operation in miRNAs detection.


Assuntos
Técnicas Biossensoriais , Eletroforese em Microchip , Neoplasias Pulmonares , MicroRNAs , Humanos , MicroRNAs/genética , MicroRNAs/análise , DNA/genética , Limite de Detecção , Técnicas de Amplificação de Ácido Nucleico/métodos , Neoplasias Pulmonares/diagnóstico , Neoplasias Pulmonares/genética , Técnicas Biossensoriais/métodos
18.
Anal Chem ; 85(13): 6511-7, 2013 Jul 02.
Artigo em Inglês | MEDLINE | ID: mdl-23745831

RESUMO

Imaging of localized hybridization of nucleic acids immobilized on a glass DNA microarray was performed by means of generation collection (GC) mode scanning electrochemical microscopy (SECM). Amine-tethered oligodeoxynucleotide probes, spotted on the glass surface, were hybridized with an unmodified target sequence and a biotinylated indicator probe via sandwich hybridization. Spots where sequence-specific hybridization had occurred were modified by streptavidin-horseradish-peroxidase-(HRP)-wrapped SiO2 nanoparticles through the biotin-streptavidin interaction. In the presence of H2O2, hydroquinone (H2Q) was oxidized to benzoquinone (BQ) at the modified spot surface through the HRP catalytic reaction, and the generated BQ corresponding to the amount of target DNA was reduced in solution by an SECM tip. With this DNA microarray, a number of genes could be detected simultaneously and selectively enough to discriminate between complementary sequences and those containing base mismatches. The DNA targets at prepared spots could be imaged in SECM GC mode over a wide concentration range (10(-7)-10(-12) M). This technique may find applications in genomic sequencing.


Assuntos
Peroxidase do Rábano Silvestre/química , Microscopia Eletroquímica de Varredura/métodos , Nanopartículas/química , Análise de Sequência com Séries de Oligonucleotídeos/métodos , Dióxido de Silício/química , Hibridização de Ácido Nucleico/métodos
19.
Electrophoresis ; 34(14): 2041-8, 2013 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-23670705

RESUMO

It is difficult to detect biogenic amines (BAs) in biological fluids because of their very low concentrations. In this paper, we reported an on-line sample preconcentration method in CE-amperometric detection (CE-AD) based on a dynamic pH junction, and a concentration enhancement of approximately 100-fold was achieved compared with the classical CE-AD methods in the simultaneous analysis of six BAs in urine (dopamine, epinephrine, norepinephrine, tyramine, tryptamine, and serotonin). The technique is proposed based on the sharp pH change generated at the boundary between an acidic sample and the basic BGE zone. Under optimized conditions, all analytes were successfully focused and well separated within 20 min with high efficiency and sensitivity (LODs at S/N = 3 ranging from 5.34 to 68.3 nM). For the analysis of urine samples by this method, satisfactory recoveries were obtained without a complicated pretreatment step or derivatization process. Therefore, it is self-evident that this approach for the analysis of real biological samples has great potential in the future.


Assuntos
Aminas Biogênicas/urina , Eletroforese Capilar/instrumentação , Eletroforese Capilar/métodos , Desenho de Equipamento , Humanos , Concentração de Íons de Hidrogênio , Limite de Detecção
20.
Sensors (Basel) ; 13(9): 12192-217, 2013 Sep 12.
Artigo em Inglês | MEDLINE | ID: mdl-24036581

RESUMO

The errors of low-cost inertial sensors, especially Micro-Electro Mechanical Systems (MEMS) ones, are highly dependent on environmental conditions such as the temperature. Thus, there is a need for the development of accurate and reliable thermal compensation models to reduce the impact of such thermal drift of the sensors. Since the conventional thermal calibration methods are typically time-consuming and costly, an efficient thermal calibration method to investigate the thermal drift of a full set of gyroscope and accelerometer errors (i.e., biases, scale factor errors and non-orthogonalities) over the entire temperature range in a few hours is proposed. The proposed method uses the idea of the Ramp method, which removes the time-consuming process of stabilizing the sensor temperature, and addresses its inherent problems with several improvements. We change the temperature linearly for a complete cycle and take a balanced strategy by making comprehensive use of the sensor measurements during both heating and cooling processes. Besides, an efficient 8-step rotate-and-static scheme is designed to further improve the calibration accuracy and efficiency. Real calibration tests showed that the proposed method is suitable for low-grade IMUs and for both lab and factory calibration due to its efficiency and sufficient accuracy.


Assuntos
Aceleração , Acelerometria/instrumentação , Calefação/métodos , Transdutores , Acelerometria/normas , Calibragem , Análise de Falha de Equipamento/métodos , Análise de Falha de Equipamento/normas , Reprodutibilidade dos Testes , Sensibilidade e Especificidade , Temperatura
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