An IRF2BP member (CgIRF2BP) involved in negative regulation of CgIFNLP expression in oyster Crassostrea gigas.

The IRF2BP family of transcription regulators act as corepressor molecules by inhibiting both enhancer-activated and basal transcription involving in many biological contexts. In the present study, an IRF2BP homologue (CgIRF2BP) was identified from oyster C. gigas. Its open reading frame is of 1809 bp encoding a polypeptide of 602 amino acids, which contains an IRF-2BP1_2 domain and a RING domain. The mRNA transcripts of CgIRF2BP were detected in all tested tissues with highest level in haemocytes (28.99-fold of that in mantle, p < 0.05). After poly (I:C) stimulation, the expression level of CgIRF2BP was significantly down-regulated at 3 h (0.50-fold of that in control group, p < 0.001) and gradually increased from 6 h to 48 h (2.69-fold of that in control group, p < 0.01). The recombinant protein of CgIRF2BP (rCgIRF2BP) showed high affinity to both rCgIRF1 and rCgIRF8 with Kd value of 1.02 × 10-7 and 2.09 × 10-7, respectively. In CgIRF2BP-RNAi oysters, the mRNA expression of CgIFNLP, CgMx1, CgViperin and CgIFI44L were significantly increased after poly (I:C) stimulation, which were 2.88 (p < 0.01), 1.83 (p < 0.05), 2.47 (p < 0.05), and 1.99-fold (p < 0.01) of that in EGFP group, respectively. These findings suggested that CgIRF2BP negatively regulated CgIFNLP expression by binding with CgIRF1 and CgIRF8.

Mechanism of the effect of vertically propagating internal gravity waves on turbulence barrier and pollutant diffusion during heavy haze episodes.

During heavy haze episodes, especially the cumulative stage (CS) of pollutants, strong turbulence intermittency and the resulting turbulence barrier effect (i.e., a phenomenon that turbulence at certain heights may disappear forming a laminar flow as if there is a barrier layer impeding the vertical turbulent exchange) suppress the vertical diffusion of pollutants, leading to high PM2.5 concentrations. However, there are still some short-time removal processes of pollutants occurring at different heights in the CS, accompanied with interesting non-simultaneous drop or opposite variation of PM2.5 concentrations at different heights. The ubiquitous internal gravity waves (IGWs) in the stable boundary layer (SBL) may play a critical role in the above situation, as they are closely related to the intermittent turbulence bursts appearing in the persistent weak turbulent motions. In this study, two representative heavy haze pollution cases were chosen to demonstrate the above speculation using five layers of turbulence data, two layers of pressure fluctuations and three layers of PM2.5 concentrations. Results showed that the non-simultaneous drop or opposite variation of PM2.5 concentrations was associated with the destruction of turbulence barrier by the vertical propagation of IGWs. IGWs generated by some certain mechanisms, such as nonhomogeneous terrain and wind shear around the low-level jet (LLJ), can propagate upward or downward with the upward or downward development of the temperature inversion layer. The vertically propagating IGWs then triggered intermittent increasing turbulence layer by layer. Turbulence between layers reconnected sequentially and turbulence barriers were broken in turn. The enhanced turbulent exchange expedited the pollutant diffusion, thus the PM2.5 concentrations at different heights varied non-simultaneously even inversely. This study provides a good explanation for the positive effects of sub-mesoscale motions such as IGWs on triggering intermittent increasing turbulence and facilitating the diffusion of pollutants during heavy haze pollution events.