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1.
Hum Mol Genet ; 29(6): 955-966, 2020 04 15.
Artigo em Inglês | MEDLINE | ID: mdl-31995180

RESUMO

γ-secretase is a macromolecular complex that catalyzes intramembranous hydrolysis of more than 100 membrane-bound substrates. The complex is composed of presenilin (PS1 or PS2), anterior pharynx defect-1 (APH-1), nicastrin (NCT) and PEN-2 and early-onset; autosomal dominant forms of Alzheimer's disease (AD) are caused by inheritance of mutations of PS. No mutations in genes encoding NCT, or PEN-2 have been identified to date that cause AD. In this regard, a large genetic meta-analysis of four cohorts consisting of more than 600 000 individuals identified a common missense variant, rs117618017 in the APH1B gene that results in a T27I mutation, as a novel genome-wide significant locus. In order to confirm the findings that rs117618017 is associated with risk of AD, we performed a genetic screen from deep whole genome sequencing of the large NIMH family-based Alzheimer's Disease (AD) dataset. In parallel, we sought to uncover potential molecular mechanism(s) by which APH-1B T27I might be associated with AD by generating stable HEK293 cell lines, wherein endogenous APH-1A and APH-1B expression was silenced and into which either the wild type APH-1B or the APH-1B T27I variant was stably expressed. We then tested the impact of expressing either the wild type APH-1B or the APH-1B T27I variant on γ-secretase processing of human APP, the murine Notch derivative mNΔE and human neuregulin-1. We now report that we fail to confirm the association of rs1047552 with AD in our cohort and that cells expressing the APH-1B T27I variant show no discernable impact on the γ-secretase processing of established substrates compared with cells expressing wild-type APH-1B.


Assuntos
Doença de Alzheimer/patologia , Secretases da Proteína Precursora do Amiloide/metabolismo , Endopeptidases/genética , Proteínas de Membrana/genética , Polimorfismo de Nucleotídeo Único , Doença de Alzheimer/genética , Células HEK293 , Humanos , Mutação , Ligação Proteica
2.
Opt Express ; 30(17): 31195-31208, 2022 Aug 15.
Artigo em Inglês | MEDLINE | ID: mdl-36242207

RESUMO

Nonlinear frequency division multiplexing (NFDM), as a possible technique to overcome the limit imposed by Kerr nonlinearity in conventional coherent optical communication systems, has attracted widespread attention in the communication community in recent years. In order to fully utilize the available degrees of freedom in the nonlinear spectrum, this paper focuses on the full-spectrum (FS) modulated NFDM system. First, we maximize the data rate of discrete spectrum (DS) by optimizing the distribution of eigenvalues in DS part of FS. Then through introducing the probabilistic shaping (PS) into the FS system, and combined with linear minimum mean square (LMMSE) estimators, a 1120 km transmission with BER below the hard decision forward error correction (HD-FEC) threshold at 112 Gbps is achieved, where 128 subcarriers with PS-64QAM are used in the continuous spectrum (CS) and 13 eigenvalues with 64QAM are adopted in the discrete spectrum (DS). The achievable data rate is about 12% higher than that of pure CS modulation. Our work achieves the current FS NFDM system with the largest number of multiplexed eigenvalues, and provides a way to improve the performance of FS systems.

3.
Opt Express ; 29(23): 38497-38511, 2021 Nov 08.
Artigo em Inglês | MEDLINE | ID: mdl-34808902

RESUMO

In optical fiber communication systems, the tendency to prefer increasingly higher baud rates, up to 100 or 200 Gbaud, compels us to deal with wideband fiber channels in which polarization effects must be treated in a more complicated manner. In contrast to the conventional 50 GHz bandwidth wavelength division multiplexing channel, polarization mode dispersion (PMD) is observed in an all-order manner in a wideband fiber channel beyond 100 GHz, rather than only first- and second-order. In this study, certain principles that should be followed in establishing a PMD emulation model in a wideband fiber channel were put forward. Then, a temporal and spectral evolution PMD model that can reflect and emulate the evolution features of the polarization effects in a real fiber channel was proposed and demonstrated. The analyses show the PMD model satisfies all the principles for the wideband channels. Finally, we suggested some approaches to define a narrowband or wideband channel only considering the polarization effects to deal with PMD in a high baud rate optical fiber communication system.

4.
Opt Express ; 29(18): 28190-28201, 2021 Aug 30.
Artigo em Inglês | MEDLINE | ID: mdl-34614956

RESUMO

Polarization mode dispersion (PMD) is one of the fundamental properties of a standard single-mode fiber. It affects the propagating signals and degrades the performance of high-speed optical fiber communication systems. PMD also gives an effect on the nonlinear spectra or scattering data in nonlinear frequency division multiplexing (NFDM) systems. However, PMD is usually described in the linear frequency domain, and there are few investigations about the influence of PMD in the nonlinear frequency domain (NFD). An NFD-PMD model is needed to understand the impact of PMD in the NFD. In this work, using a linear approximation method, we first propose an NFD-PMD model and verify its effectiveness. With the guide of the NFD-PMD model, a blind NFD-PMD equalization scheme is designed. The simulation results indicate that the proposed NFD-PMD equalization scheme has better performance than the training sequence method based on linear frequency domain equalization.

5.
Opt Lett ; 46(15): 3697-3700, 2021 Aug 01.
Artigo em Inglês | MEDLINE | ID: mdl-34329259

RESUMO

A joint scheme introducing probabilistic shaping (PS) at the transmitter and utilizing a neural network (NN) equalizer at the receiver is proposed to improve the performance of the b-modulated nonlinear frequency division multiplexing (NFDM) system. Through a numerical simulation, we demonstrate that PS plays a leading role for low launch power case, which improves the performance of the system effectively, while the NN equalizer's superiority appears in a high launch power region, whose main role is to weaken the correlation among subcarriers for improving system performance. The proposed scheme would enlighten the optimum modulation and detection schemes of the NFDM system.

6.
Opt Express ; 28(12): 18304-18316, 2020 Jun 08.
Artigo em Inglês | MEDLINE | ID: mdl-32680029

RESUMO

Nonlinear frequency division multiplexing (NFDM) has been shown to be promising in overcoming the fiber Kerr nonlinearity limit. In multiple-eigenvalue modulated NFDM systems, the transmission capacity increases with the number of modulated eigenvalues. However, as the number of modulated eigenvalues increases, the complexities of the signal waveform and the nonlinear Fourier transform (NFT) algorithm for demodulation increase dramatically as well, while the accuracy drops significantly. Meanwhile, impairments such as amplifier spontaneous emission noise and phase noise in practical channels would perturb the eigenvalues and the corresponding nonlinear spectra during transmission. Coupled with an increase in the modulation format order, it is difficult for NFT algorithm-based receivers to recover information. To enable the use of multiple-eigenvalue modulated NFDM systems, we propose an innovative receiver based on regression neural networks (NNs), which can demodulate information correctly for both single- and dual-polarization NFDM systems. The results show that it has strong robustness and has a certain tolerance to the impairments of communication systems. In the contrast that the poor demodulation performance of the NFT and the Euclidean minimum distance (MD) receivers for multi-eigenvalue modulated NFDM systems, our proposed NN receiver can achieve low bit error rate with 2 GBaud 16QAM modulation over 1,000 km transmission in four-eigenvalue modulated single-polarization NFDM systems. The performance of three receivers (NFT, MD and NN) in a two-eigenvalue modulated NFDM system are also compared, the NN receiver shows the best performance and appears more suitable for higher-order modulation formats.

7.
Opt Express ; 28(10): 15360-15375, 2020 May 11.
Artigo em Inglês | MEDLINE | ID: mdl-32403565

RESUMO

A nonlinear frequency division multiplexing (NFDM) transmission system, designed specifically for nonlinear fiber channel, has the potential to overcome the nonlinear Shannon capacity limit. However, the spectral efficiency (SE) of the current proven NFDM transmission systems is still lower than that of the analogous orthogonal frequency division multiplexing system. It is extremely necessary to explore effective modulation scheme for the aim of increasing the SE of NFDM system. In this study, we first propose the nonlinear-frequency-packing nonlinear frequency division multiplexing (NFP-NFDM) transmission system. In NFP-NFDM, the spacing of nonlinear subcarriers is squeezed and more nonlinear subcarriers can be packed, but the inter carrier interference (ICI) is introduced. The method of NFP in nonlinear Fourier domain is carefully designed to reduce the complexity of ICI cancellation. Through numerical simulation, we illustrate the feasibility of NFP-NFDM transmission, and higher SE in NFP-NFDM than that of NFDM system is also demonstrated. The upper bound of the normalized SE for NFP-NFDM is estimated, which is higher than that of current NFDM system. Besides, we find out that the NFP scheme may have the advantage of reducing the signal-noise interaction in fiber transmission scenario, which indicates there may be a better way to load the data into the nonlinear Fourier domain.

8.
Opt Express ; 27(20): 28223-28238, 2019 Sep 30.
Artigo em Inglês | MEDLINE | ID: mdl-31684579

RESUMO

Although fruitful studies have been conducted on carrier frequency offset (CFO) estimations in linear coherent optical fiber communication systems, there are few studies on CFO estimations and recoveries in the systems based on the nonlinear Fourier transform (NFT). Although the CFO is originated from the linear frequency domain, it definitely has effects on nonlinear spectra, including the shift of the nonlinear frequency and the phase rotations of the scattering data, which are similar to its effects on linear spectra. This work indicates that it is feasible to estimate frequency offset (FO) by capturing symbol variations in the nonlinear frequency domain (NFD) rather than in the linear frequency domain; the latter was usually exploited in the literature. Based on a thorough investigation of the FO induced behavior that appears in a nonlinear frequency division multiplexing (NFDM) system, we proposed a nonlinear frequency domain estimation method aided by training symbols (TS) using an angle search algorithm after NFT operations at the receiver. The discussions in this paper prove that the proposed method is generally applicable to the NFDM systems regardless of whether using single or multiple eigenvalues. A performance comparison between the NFD method and the conventional method in the linear frequency domain is performed with different modulation formats for both single and multiple eigenvalue NFDM transmission systems. The analysis results show that the proposed method holds the better stability and estimation accuracy in contrast with the linear domain estimation method. The TS overhead can also be deduced dramatically, which implies better transmission efficiency. Therefore, the NFD method is more powerful for eigenvalue NFDM transmission systems, especially for the scenarios where high order modulation formats and multiple eigenvalues are utilized.

9.
J Biol Chem ; 291(13): 6748-53, 2016 Mar 25.
Artigo em Inglês | MEDLINE | ID: mdl-26887941

RESUMO

Understanding of the structure of the γ-secretase complex consisting of presenilin (PS), anterior pharynx-defective 1 (APH-1), nicastrin (NCT), and presenilin enhancer 2 (PEN-2) is of significant therapeutic interest for the design of γ-secretase modulators for Alzheimer disease. The structure of γ-secretase revealed by cryo-EM approaches suggested a substrate binding mechanism for NCT, a bilobar structure that involved rotation of the two lobes around a central pivot and opening of a "lid" region that facilitates substrate recruitment. To validate this proposal, we expressed NCT that lacks the lid entirely, or a variety of NCT variants that harbor mutations at highly conserved residues in the lid region inNCT-deficient cells, and then assessed their impact on γ-secretase assembly, activity, and stability. In addition, we assessed the impact of mutating a critical residue proposed to be a pivot around which the two lobes of NCT rotate. Our results show that neither the mutations on the lid tested here nor the entire lid deletion has any significant impact on γ-secretase assembly, activity, and stability, and that NCT with the mutation of the proposed pivot rescues γ-secretase activity inNCT-deficient cells in a manner indistinguishable from WT NCT. These findings indicate that the NCT lid is not an essential element necessary for γ-secretase assembly, activity, and stability, and that rotation of the two lobes appears not to be a prerequisite for substrate binding and γ-secretase function.


Assuntos
Secretases da Proteína Precursora do Amiloide/metabolismo , Fibroblastos/metabolismo , Glicoproteínas de Membrana/genética , Proteínas de Membrana/metabolismo , Peptídeo Hidrolases/metabolismo , Presenilinas/metabolismo , Sequência de Aminoácidos , Secretases da Proteína Precursora do Amiloide/química , Secretases da Proteína Precursora do Amiloide/genética , Animais , Linhagem Celular , Endopeptidases , Fibroblastos/citologia , Regulação da Expressão Gênica , Teste de Complementação Genética , Humanos , Glicoproteínas de Membrana/química , Glicoproteínas de Membrana/metabolismo , Proteínas de Membrana/genética , Dados de Sequência Molecular , Mutagênese Sítio-Dirigida , Mutação , Peptídeo Hidrolases/genética , Presenilinas/genética , Ligação Proteica , Multimerização Proteica , Estabilidade Proteica , Estrutura Terciária de Proteína , Alinhamento de Sequência , Transdução de Sinais , Relação Estrutura-Atividade
10.
J Biol Chem ; 289(50): 34851-61, 2014 Dec 12.
Artigo em Inglês | MEDLINE | ID: mdl-25352592

RESUMO

The γ-secretase complex, composed of presenilin, nicastrin (NCT), anterior pharynx-defective 1 (APH-1), and presenilin enhancer 2 (PEN-2), is assembled in a highly regulated manner and catalyzes the intramembranous proteolysis of many type I membrane proteins, including Notch and amyloid precursor protein. The Notch family of receptors plays important roles in cell fate specification during development and in adult tissues, and aberrant hyperactive Notch signaling causes some forms of cancer. γ-Secretase-mediated processing of Notch at the cell surface results in the generation of the Notch intracellular domain, which associates with several transcriptional coactivators involved in nuclear signaling events. On the other hand, γ-secretase-mediated processing of amyloid precursor protein leads to the production of amyloid ß (Aß) peptides that play an important role in the pathogenesis of Alzheimer disease. We used a phage display approach to identify synthetic antibodies that specifically target NCT and expressed them in the single-chain variable fragment (scFv) format in mammalian cells. We show that expression of a NCT-specific scFv clone, G9, in HEK293 cells decreased the production of the Notch intracellular domain but not the production of amyloid ß peptides that occurs in endosomal and recycling compartments. Biochemical studies revealed that scFvG9 impairs the maturation of NCT by associating with immature forms of NCT and, consequently, prevents its association with the other components of the γ-secretase complex, leading to degradation of these molecules. The reduced cell surface levels of mature γ-secretase complexes, in turn, compromise the intramembranous processing of Notch.


Assuntos
Secretases da Proteína Precursora do Amiloide/metabolismo , Glicoproteínas de Membrana/imunologia , Glicoproteínas de Membrana/metabolismo , Anticorpos de Cadeia Única/imunologia , Secretases da Proteína Precursora do Amiloide/química , Secretases da Proteína Precursora do Amiloide/imunologia , Especificidade de Anticorpos , Células HEK293 , Humanos , Espaço Intracelular/metabolismo , Glicoproteínas de Membrana/química , Ligação Proteica , Estrutura Terciária de Proteína , Transporte Proteico , Proteólise , Receptores Notch/metabolismo , Anticorpos de Cadeia Única/genética
11.
Proc Natl Acad Sci U S A ; 109(22): 8534-9, 2012 May 29.
Artigo em Inglês | MEDLINE | ID: mdl-22586122

RESUMO

The γ-secretase complex, composed of presenilin, anterior-pharynx-defective 1, nicastrin, and presenilin enhancer 2, catalyzes the intramembranous processing of a wide variety of type I membrane proteins, including amyloid precursor protein (APP) and Notch. Earlier studies have revealed that nicastrin, a type I membrane-anchored glycoprotein, plays a role in γ-secretase assembly and trafficking and has been proposed to bind substrates. To gain more insights regarding nicastrin structure and function, we generated a conformation-specific synthetic antibody and used it as a molecular probe to map functional domains within nicastrin ectodomain. The antibody bound to a conformational epitope within a nicastrin segment encompassing residues 245-630 and inhibited the processing of APP and Notch substrates in in vitro γ-secretase activity assays, suggesting that a functional domain pertinent to γ-secretase activity resides within this region. Epitope mapping and database searches revealed the presence of a structured segment, located downstream of the previously identified DAP domain (DYIGS and peptidase; residues 261-502), that is homologous to a tetratricopeptide repeat (TPR) domain commonly involved in peptide recognition. Mutagenesis analyses within the predicted TPR-like domain showed that disruption of the signature helical structure resulted in the loss of γ-secretase activity but not the assembly of the γ-secretase and that Leu571 within the TPR-like domain plays an important role in mediating substrate binding. Taken together, these studies offer provocative insights pertaining to the structural basis for nicastrin function as a "substrate receptor" within the γ-secretase complex.


Assuntos
Secretases da Proteína Precursora do Amiloide/metabolismo , Anticorpos/metabolismo , Glicoproteínas de Membrana/metabolismo , Oligopeptídeos/metabolismo , Sequência de Aminoácidos , Secretases da Proteína Precursora do Amiloide/química , Secretases da Proteína Precursora do Amiloide/genética , Precursor de Proteína beta-Amiloide/metabolismo , Animais , Sítios de Ligação/genética , Biocatálise , Western Blotting , Células Cultivadas , Dicroísmo Circular , Epitopos/química , Epitopos/genética , Epitopos/metabolismo , Células HEK293 , Humanos , Imuno-Histoquímica/métodos , Glicoproteínas de Membrana/química , Glicoproteínas de Membrana/genética , Camundongos , Camundongos Knockout , Mutação , Oligopeptídeos/química , Oligopeptídeos/genética , Ligação Proteica , Conformação Proteica , Estrutura Terciária de Proteína , Sequências Repetitivas de Aminoácidos/genética , Ressonância de Plasmônio de Superfície , Espectrometria de Massas em Tandem
12.
Biochemistry ; 53(4): 702-13, 2014 Feb 04.
Artigo em Inglês | MEDLINE | ID: mdl-24401146

RESUMO

Alzheimer's disease (AD) is characterized pathologically by an abundance of extracellular neuritic plaques composed primarily of the 42-amino acid amyloid ß peptide variant (Aß42). In the majority of familial AD (FAD) cases, e.g., those harboring mutations in presenilin 1 (PS1), there is a relative increase in the levels of Aß42 compared to the levels of Aß40. We previously reported the characterization of a series of aminothiazole-bridged aromates termed aryl aminothiazole γ-secretase modulators or AGSMs [Kounnas, M. Z., et al. (2010) Neuron 67, 769-780] and showed their potential for use in the treatment of FAD [Wagner, S. L., et al. (2012) Arch. Neurol. 69, 1255-1258]. Here we describe a series of GSMs with physicochemical properties improved compared to those of AGSMs. Specific heterocycle replacements of the phenyl rings in AGSMs provided potent molecules with improved aqueous solubilities. A number of these soluble γ-secretase modulators (SGSMs) potently lowered Aß42 levels without inhibiting proteolysis of Notch or causing accumulation of amyloid precursor protein carboxy-terminal fragments, even at concentrations approximately 1000-fold greater than their IC50 values for reducing Aß42 levels. The effects of one potent SGSM on Aß peptide production were verified by matrix-assisted laser desorption ionization time-of-flight mass spectrometry, showing enhanced production of a number of carboxy-truncated Aß species. This SGSM also inhibited Aß42 peptide production in a highly purified reconstituted γ-secretase in vitro assay system and retained the ability to modulate γ-secretase-mediated proteolysis in a stably transfected cell culture model overexpressing a human PS1 mutation validating the potential for use in FAD.


Assuntos
Secretases da Proteína Precursora do Amiloide/antagonistas & inibidores , Peptídeos beta-Amiloides/biossíntese , Fragmentos de Peptídeos/biossíntese , Derivados de Benzeno/síntese química , Derivados de Benzeno/química , Derivados de Benzeno/farmacologia , Linhagem Celular Tumoral , Ensaios Enzimáticos , Humanos , Imidazóis/síntese química , Imidazóis/química , Imidazóis/farmacologia , Mutação , Presenilina-1/genética , Presenilina-1/metabolismo , Proteólise , Receptor Notch1/metabolismo , Solubilidade , Relação Estrutura-Atividade , Tiazóis/síntese química , Tiazóis/química , Tiazóis/farmacologia
13.
J Neurosci ; 32(25): 8633-48, 2012 Jun 20.
Artigo em Inglês | MEDLINE | ID: mdl-22723704

RESUMO

Presenilins 1 and 2 (PS1 and PS2) are the catalytic subunits of the γ-secretase complex, and genes encoding mutant PS1 and PS2 variants cause familial forms of Alzheimer's disease. Lee et al. (2010) recently reported that loss of PS1 activity lead to impairments in autophagosomal function as a consequence of lysosomal alkalinization, caused by failed maturation of the proton translocating V0a1 subunit of the vacuolar (H+)-ATPase and targeting to the lysosome. We have reexamined these issues in mammalian cells and in brains of mice lacking PS (PScdko) and have been unable to find evidence that the turnover of autophagic substrates, vesicle pH, V0a1 maturation, or lysosome function is altered compared with wild-type counterparts. Collectively, our studies fail to document a role for presenilins in regulating cellular autophagosomal function. On the other hand, our transcriptome studies of PScdko mouse brains reveal, for the first time, a role for PS in regulating lysosomal biogenesis.


Assuntos
Autofagia/fisiologia , Lisossomos/metabolismo , Presenilina-1/fisiologia , Presenilina-2/fisiologia , Presenilinas/fisiologia , Animais , Autofagia/genética , Fatores de Transcrição de Zíper de Leucina e Hélice-Alça-Hélix Básicos/genética , Fatores de Transcrição de Zíper de Leucina e Hélice-Alça-Hélix Básicos/fisiologia , Blastocisto/metabolismo , Western Blotting , Catepsina D/metabolismo , Linhagem Celular Tumoral , Células Cultivadas , Primers do DNA , Expressão Gênica/fisiologia , Humanos , Concentração de Íons de Hidrogênio , Camundongos , Camundongos Knockout , Neurônios/metabolismo , Reação em Cadeia da Polimerase , Presenilina-1/genética , Presenilina-2/genética , Presenilinas/genética , RNA/biossíntese , RNA/genética , RNA Interferente Pequeno/farmacologia , ATPases Vacuolares Próton-Translocadoras/metabolismo
14.
Proc Natl Acad Sci U S A ; 107(50): 21435-40, 2010 Dec 14.
Artigo em Inglês | MEDLINE | ID: mdl-21115843

RESUMO

A complex composed of presenilin (PS), nicastrin, PEN-2, and APH-1 is absolutely required for γ-secretase activity in vivo. Evidence has emerged to suggest a role for PS as the catalytic subunit of γ-secretase, but it has not been established that PS is catalytically active in the absence of associated subunits. We now report that bacterially synthesized, recombinant PS (rPS) reconstituted into liposomes exhibits γ-secretase activity. Moreover, an rPS mutant that lacks a catalytic aspartate residue neither exhibits reconstituted γ-secretase activity nor interacts with a transition-state γ-secretase inhibitor. Importantly, we demonstrate that rPS harboring mutations that cause early onset familial Alzheimer's disease (FAD) lead to elevations in the ratio of Aß42 to Aß40 peptides produced from a wild-type APP substrate and that rPS enhances the Aß42/Aß40 peptide ratio from FAD-linked mutant APP substrates, findings that are entirely consistent with the results obtained in in vivo settings. Thus, γ-secretase cleavage specificity is an inherent property of the polypeptide. Finally, we demonstrate that PEN2 is sufficient to promote the endoproteolysis of PS1 to generate the active form of γ-secretase. Thus, we conclusively establish that activated PS is catalytically competent and the bimolecular interaction of PS1 and PEN2 can convert the PS1 zymogen to an active protease.


Assuntos
Secretases da Proteína Precursora do Amiloide/metabolismo , Presenilina-1/metabolismo , Subunidades Proteicas/metabolismo , Proteínas Recombinantes/metabolismo , Doença de Alzheimer/enzimologia , Doença de Alzheimer/genética , Secretases da Proteína Precursora do Amiloide/genética , Peptídeos beta-Amiloides/genética , Peptídeos beta-Amiloides/metabolismo , Precursor de Proteína beta-Amiloide/genética , Precursor de Proteína beta-Amiloide/metabolismo , Ativação Enzimática , Humanos , Proteínas de Membrana/genética , Proteínas de Membrana/metabolismo , Mutação , Fragmentos de Peptídeos/genética , Fragmentos de Peptídeos/metabolismo , Presenilina-1/genética , Subunidades Proteicas/genética , Proteolipídeos/química , Proteínas Recombinantes/genética
15.
Mol Neurodegener ; 18(1): 95, 2023 Dec 16.
Artigo em Inglês | MEDLINE | ID: mdl-38104136

RESUMO

BACKGROUND: Microglia, the brain-resident macrophages perform immune surveillance and engage with pathological processes resulting in phenotype changes necessary for maintaining homeostasis. In preceding studies, we showed that antibiotic-induced perturbations of the gut microbiome of APPPS1-21 mice resulted in significant attenuation in Aß amyloidosis and altered microglial phenotypes that are specific to male mice. The molecular events underlying microglial phenotypic transitions remain unclear. Here, by generating 'APPPS1-21-CD11br' reporter mice, we investigated the translational state of microglial/macrophage ribosomes during their phenotypic transition and in a sex-specific manner. METHODS: Six groups of mice that included WT-CD11br, antibiotic (ABX) or vehicle-treated APPPS1-21-CD11br males and females were sacrificed at 7-weeks of age (n = 15/group) and used for immunoprecipitation of microglial/macrophage polysomes from cortical homogenates using anti-FLAG antibody. Liquid chromatography coupled to tandem mass spectrometry and label-free quantification was used to identify newly synthesized peptides isolated from polysomes. RESULTS: We show that ABX-treatment leads to decreased Aß levels in male APPPS1-21-CD11br mice with no significant changes in females. We identified microglial/macrophage polypeptides involved in mitochondrial dysfunction and altered calcium signaling that are associated with Aß-induced oxidative stress. Notably, female mice also showed downregulation of newly-synthesized ribosomal proteins. Furthermore, male mice showed an increase in newly-synthesized polypeptides involved in FcγR-mediated phagocytosis, while females showed an increase in newly-synthesized polypeptides responsible for actin organization associated with microglial activation. Next, we show that ABX-treatment resulted in substantial remodeling of the epigenetic landscape, leading to a metabolic shift that accommodates the increased bioenergetic and biosynthetic demands associated with microglial polarization in a sex-specific manner. While microglia in ABX-treated male mice exhibited a metabolic shift towards a neuroprotective phenotype that promotes Aß clearance, microglia in ABX-treated female mice exhibited loss of energy homeostasis due to persistent mitochondrial dysfunction and impaired lysosomal clearance that was associated with inflammatory phenotypes. CONCLUSIONS: Our studies provide the first snapshot of the translational state of microglial/macrophage cells in a mouse model of Aß amyloidosis that was subject to ABX treatment. ABX-mediated changes resulted in metabolic reprogramming of microglial phenotypes to modulate immune responses and amyloid clearance in a sex-specific manner. This microglial plasticity to support neuro-energetic homeostasis for its function based on sex paves the path for therapeutic modulation of immunometabolism for neurodegeneration.


Assuntos
Doença de Alzheimer , Amiloidose , Microbiota , Doenças Mitocondriais , Camundongos , Animais , Masculino , Feminino , Doença de Alzheimer/metabolismo , Microglia/metabolismo , Camundongos Transgênicos , Antibacterianos/metabolismo , Antibacterianos/farmacologia , Amiloidose/metabolismo , Macrófagos/metabolismo , Peptídeos/metabolismo , Doenças Mitocondriais/metabolismo , Doenças Mitocondriais/patologia , Epigênese Genética , Peptídeos beta-Amiloides/metabolismo , Modelos Animais de Doenças
16.
J Biol Chem ; 286(24): 21440-9, 2011 Jun 17.
Artigo em Inglês | MEDLINE | ID: mdl-21454611

RESUMO

The γ-secretase membrane protein complex is responsible for proteolytic maturation of signaling precursors and catalyzes the final step in the production of the amyloid ß-peptides implicated in the pathogenesis of Alzheimer disease. The incorporation of PEN-2 (presenilin enhancer 2) into a pre-activation intermediate, composed of the catalytic subunit presenilin and the accessory proteins APH-1 (anterior pharynx-defective 1) and nicastrin, triggers the endoproteolysis of presenilin and results in an active tetrameric γ-secretase. We have determined the three-dimensional reconstruction of a mature and catalytically active γ-secretase using single-particle cryo-electron microscopy. γ-Secretase has a cup-like shape with a lateral belt of ∼40-50 Å in height that encloses a water-accessible internal chamber. Active site labeling with a gold-coupled transition state analog inhibitor suggested that the γ-secretase active site faces this chamber. Comparison with the structure of a trimeric pre-activation intermediate suggested that the incorporation of PEN-2 might contribute to the maturation of the active site architecture.


Assuntos
Secretases da Proteína Precursora do Amiloide/química , Microscopia Eletrônica/métodos , Doença de Alzheimer/metabolismo , Secretases da Proteína Precursora do Amiloide/metabolismo , Peptídeos beta-Amiloides/química , Catálise , Domínio Catalítico , Microscopia Crioeletrônica/métodos , Dimerização , Humanos , Proteínas de Membrana/química , Peptídeos/química , Ligação Proteica , Conformação Proteica , Transdução de Sinais
17.
J Exp Med ; 219(1)2022 01 03.
Artigo em Inglês | MEDLINE | ID: mdl-34854884

RESUMO

We previously demonstrated that lifelong antibiotic (ABX) perturbations of the gut microbiome in male APPPS1-21 mice lead to reductions in amyloid ß (Aß) plaque pathology and altered phenotypes of plaque-associated microglia. Here, we show that a short, 7-d treatment of preweaned male mice with high-dose ABX is associated with reductions of Aß amyloidosis, plaque-localized microglia morphologies, and Aß-associated degenerative changes at 9 wk of age in male mice only. More importantly, fecal microbiota transplantation (FMT) from transgenic (Tg) or WT male donors into ABX-treated male mice completely restored Aß amyloidosis, plaque-localized microglia morphologies, and Aß-associated degenerative changes. Transcriptomic studies revealed significant differences between vehicle versus ABX-treated male mice and FMT from Tg mice into ABX-treated mice largely restored the transcriptome profiles to that of the Tg donor animals. Finally, colony-stimulating factor 1 receptor (CSF1R) inhibitor-mediated depletion of microglia in ABX-treated male mice failed to reduce cerebral Aß amyloidosis. Thus, microglia play a critical role in driving gut microbiome-mediated alterations of cerebral Aß deposition.


Assuntos
Peptídeos beta-Amiloides/metabolismo , Amiloidose/metabolismo , Encéfalo/metabolismo , Microbioma Gastrointestinal/fisiologia , Microglia/metabolismo , Amiloidose/genética , Animais , Anticorpos/administração & dosagem , Encéfalo/efeitos dos fármacos , Quimiocinas/sangue , Quimiocinas/genética , Quimiocinas/metabolismo , Citocinas/sangue , Citocinas/genética , Citocinas/metabolismo , Transplante de Microbiota Fecal , Fezes/microbiologia , Feminino , Microbioma Gastrointestinal/efeitos dos fármacos , Microbioma Gastrointestinal/genética , Perfilação da Expressão Gênica/métodos , Ontologia Genética , Masculino , Camundongos Endogâmicos C57BL , Camundongos Transgênicos , RNA-Seq/métodos , Fatores Sexuais
18.
J Exp Med ; 218(6)2021 06 07.
Artigo em Inglês | MEDLINE | ID: mdl-33822840

RESUMO

Familial Alzheimer's disease (FAD)-linked mutations in the APP gene occur either within the Aß-coding region or immediately proximal and are located in exons 16 and 17, which encode Aß peptides. We have identified an extremely rare, partially penetrant, single nucleotide variant (SNV), rs145081708, in APP that corresponds to a Ser198Pro substitution in exon 5. We now report that in stably transfected cells, expression of APP harboring the S198P mutation (APPS198P) leads to elevated production of Aß peptides by an unconventional mechanism in which the folding and exit of APPS198P from the endoplasmic reticulum is accelerated. More importantly, coexpression of APP S198P and the FAD-linked PS1ΔE9 variant in the brains of male and female transgenic mice leads to elevated steady-state Aß peptide levels and acceleration of Aß deposition compared with age- and gender-matched mice expressing APP and PS1ΔE9. This is the first AD-linked mutation in APP present outside of exons 16 and 17 that enhances Aß production and deposition.


Assuntos
Peptídeos beta-Amiloides/genética , Precursor de Proteína beta-Amiloide/genética , Mutação/genética , Doença de Alzheimer/genética , Animais , Encéfalo/patologia , Linhagem Celular Tumoral , Modelos Animais de Doenças , Éxons/genética , Feminino , Células HEK293 , Humanos , Masculino , Camundongos , Camundongos Transgênicos/genética , Placa Amiloide/genética
19.
J Exp Med ; 216(7): 1542-1560, 2019 07 01.
Artigo em Inglês | MEDLINE | ID: mdl-31097468

RESUMO

We demonstrated that an antibiotic cocktail (ABX)-perturbed gut microbiome is associated with reduced amyloid-ß (Aß) plaque pathology and astrogliosis in the male amyloid precursor protein (APP)SWE /presenilin 1 (PS1)ΔE9 transgenic model of Aß amyloidosis. We now show that in an independent, aggressive APPSWE/PS1L166P (APPPS1-21) mouse model of Aß amyloidosis, an ABX-perturbed gut microbiome is associated with a reduction in Aß pathology and alterations in microglial morphology, thus establishing the generality of the phenomenon. Most importantly, these latter alterations occur only in brains of male mice, not in the brains of female mice. Furthermore, ABX treatment lead to alterations in levels of selected microglial expressed transcripts indicative of the "M0" homeostatic state in male but not in female mice. Finally, we found that transplants of fecal microbiota from age-matched APPPS1-21 male mice into ABX-treated APPPS1-21 male restores the gut microbiome and partially restores Aß pathology and microglial morphology, thus demonstrating a causal role of the microbiome in the modulation of Aß amyloidosis and microglial physiology in mouse models of Aß amyloidosis.


Assuntos
Neuropatias Amiloides/patologia , Encefalopatias/patologia , Microbioma Gastrointestinal , Microglia/patologia , Precursor de Proteína beta-Amiloide/metabolismo , Animais , Antibacterianos/efeitos adversos , Modelos Animais de Doenças , Transplante de Microbiota Fecal , Feminino , Microbioma Gastrointestinal/efeitos dos fármacos , Microbioma Gastrointestinal/fisiologia , Masculino , Camundongos , Placa Amiloide/metabolismo , Fatores Sexuais
20.
Cerebellum ; 7(3): 482-93, 2008.
Artigo em Inglês | MEDLINE | ID: mdl-18769992

RESUMO

Pcp2(L7) is a Purkinje cell-specific GoLoco domain protein that modulates activation of Galphai/o proteins by G protein-coupled receptors. A likely downstream effector of this pathway is the P-type Ca(2+) channel, and thereby, the intrinsic electrophysiology of Purkinje cells could be modulated by Pcp2(L7). It has long been known that the Pcp2(L7) mRNA is abundantly localized in dendrites, suggesting the possibility of distal synthesis and local changes in levels of the protein. As a first step to uncover the trafficking and translational mechanisms for this mRNA, we have begun identifying the cis-acting sequences important for its localization in dendrites. Using expression of modified transgenes in vivo, we show that the 3'UTR, only 65 bases long, is necessary in this process.


Assuntos
Regiões 3' não Traduzidas/fisiologia , Dendritos/fisiologia , Células de Purkinje/fisiologia , RNA Mensageiro/metabolismo , Receptores Acoplados a Proteínas G/fisiologia , Regiões 3' não Traduzidas/genética , Animais , Primers do DNA , Amplificação de Genes , Hibridização In Situ , Camundongos , Camundongos Transgênicos , Reação em Cadeia da Polimerase , RNA Mensageiro/genética , RNA Viral/genética , Vírus 40 dos Símios/genética
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