Functional composition outweighs taxonomic and functional diversity in maintaining ecosystem properties and processes of mangrove forests.

Biodiversity loss can have significant consequences for human well-being, as it can affect multiple ecosystem properties and processes (MEPP) that drive ecosystem services. However, a comprehensive understanding of the link between environmental factors, biodiversity, and MEPP remains elusive, especially in mangrove ecosystems that millions of people along tropical coastlines worldwide depend upon. Here, we collated a comprehensive dataset on forest inventory, plant traits, and environmental factors across 93 plots in the Sundarbans Reserved Forests, Bangladesh. The functional composition (FC) of leaf area showed a stronger positive association with MEPP, being determined by total biomass and productivity of the mangroves, sediment organic carbon, and ammonium, phosphorus, and potassium contents of the sediment, than species richness (SR) or functional diversity (FD). Further, FC mediated a strong negative association of sediment salinity, and a positive association of SR, with MEPP. The similar but opposite total associations of SR and sediment salinity with MEPP suggest that species-rich mangroves could offset the negative impacts of rising salinity on MEPP. When focusing on a single aspect of MEPP, both FD and FC mattered, with the FD of leaf area showing a strong association with mangrove productivity and sediment potassium content, while the FC of leaf litter nitrogen showed the strongest associations with sediment ammonium and phosphorus contents. Therefore, to sustain mangrove ecosystems as a reliable nature-based solution for climate change mitigation, conservation and (re-)establishment projects should prioritize regionally dominant species with high leaf area and nitrogen content, plus functionally different species to support the ecosystem processes and services provided by mangroves.

Response of macrophyte litter decomposition in global blue carbon ecosystems to climate change.

Blue carbon ecosystems (BCEs) are important nature-based solutions for climate change-mitigation. However, current debates question the reliability and contribution of BCEs under future climatic-scenarios. The answer to this question depends on ecosystem processes driving carbon-sequestration and -storage, such as primary production and decomposition, and their future rates. We performed a global meta-analysis on litter decomposition rate constants (k) in BCEs and predicted changes in carbon release from 309 studies. The relationships between k and climatic factors were examined by extracting remote-sensing data on air temperature, sea-surface temperature, and precipitation aligning to the decomposition time of each experiment. We constructed global numerical models of litter decomposition to forecast k and carbon release under different scenarios. The current k averages at 27 ± 3 × 10-2 day-1 for macroalgae were higher than for seagrasses (1.7 ± 0.2 × 10-2 day-1 ), mangroves (1.6 ± 0.1 × 10-2 day-1 ) and tidal marshes (5.9 ± 0.5 × 10-3 day-1 ). Macrophyte k increased with both air temperature and precipitation in intertidal BCEs and with sea surface temperature for subtidal seagrasses. Above a temperature threshold for vascular plant litter at ~25°C and ~20°C for macroalgae, k drastically increased with increasing temperature. However, the direct effect of high temperatures on k are obscured by other factors in field experiments compared with laboratory experiments. We defined "fundamental" and "realized" temperature response to explain this effect. Based on relationships for realized temperature response, we predict that proportions of decomposed litter will increase by 0.9%-5% and 4.7%-28.8% by 2100 under low- (2°C) and high-warming conditions (4°C) compared to 2020, respectively. Net litter carbon sinks in BCEs will increase due to higher increase in litter C production than in decomposition by 2100 compared to 2020 under RCP 8.5. We highlight that BCEs will play an increasingly important role in future climate change-mitigation. Our findings can be leveraged for blue carbon accounting under future climate change scenarios.

Plant species- and stage-specific differences in microbial decay of mangrove leaf litter: the older the better?

Leaf litter and its breakdown products represent an important input of organic matter and nutrients to mangrove sediments and adjacent coastal ecosystems. It is commonly assumed that old-grown stands with mature trees contribute more to the permanent sediment organic matter pool than younger stands. However, neither are interspecific differences in leaf decay rates taken into account in this assumption nor is our understanding of the underlying mechanisms or drivers of differences in leaf chemistry sufficient. This study examines the influence of different plant species and ontogenetic stage on the microbial decay of mangrove leaf litter. A litterbag experiment was conducted in the Matang Mangrove Forest Reserve, Malaysia, to monitor leaf litter mass loss, and changes in leaf litter chemistry and microbial enzyme activity. Four mangrove species of different morphologies were selected, namely the trees Rhizophora apiculata and Bruguiera parviflora, the fern Acrostichum aureum and the shrub Acanthus ilicifolius. Decay rates of mangrove leaf litter decreased from A. ilicifolius to R. apiculata to B. parviflora to A. aureum. Leaf litter mass, total phenolic content, protein precipitation capacity and phenol oxidase activity were found to decline rapidly during the early stage of decay. Leaf litter from immature plants differed from that of mature plants in total phenolic content, phenolic signature, protein precipitating capacity and protease activity. For R. apiculata, but not of the other species, leaf litter from immature plants decayed faster than the litter of mature plants. The findings of this study advance our understanding of the organic matter dynamics in mangrove stands of different compositions and ages and will, thus, prove useful in mangrove forest management.

Priorities for research in soil ecology.

The ecological interactions that occur in and with soil are of consequence in many ecosystems on the planet. These interactions provide numerous essential ecosystem services, and the sustainable management of soils has attracted increasing scientific and public attention. Although soil ecology emerged as an independent field of research many decades ago, and we have gained important insights into the functioning of soils, there still are fundamental aspects that need to be better understood to ensure that the ecosystem services that soils provide are not lost and that soils can be used in a sustainable way. In this perspectives paper, we highlight some of the major knowledge gaps that should be prioritized in soil ecological research. These research priorities were compiled based on an online survey of 32 editors of Pedobiologia - Journal of Soil Ecology. These editors work at universities and research centers in Europe, North America, Asia, and Australia.The questions were categorized into four themes: (1) soil biodiversity and biogeography, (2) interactions and the functioning of ecosystems, (3) global change and soil management, and (4) new directions. The respondents identified priorities that may be achievable in the near future, as well as several that are currently achievable but remain open. While some of the identified barriers to progress were technological in nature, many respondents cited a need for substantial leadership and goodwill among members of the soil ecology research community, including the need for multi-institutional partnerships, and had substantial concerns regarding the loss of taxonomic expertise.

Sex- and habitat-specific movement of an omnivorous semi-terrestrial crab controls habitat connectivity and subsidies: a multi-parameter approach.

Distinct habitats are often linked through fluxes of matter and migration of organisms. In particular, intertidal ecotones are prone to being influenced from both the marine and the terrestrial realms, but whether or not small-scale migration for feeding, sheltering or reproducing is detectable may depend on the parameter studied. Within the ecotone of an upper saltmarsh in the United States, we investigated the sex-specific movement of the semi-terrestrial crab Armases cinereum using an approach of determining multiple measures of across-ecotone migration. To this end, we determined food preference, digestive abilities (enzyme activities), bacterial hindgut communities (genetic fingerprint), and the trophic position of Armases and potential food sources (stable isotopes) of males versus females of different sub-habitats, namely high saltmarsh and coastal forest. Daily observations showed that Armases moved frequently between high-intertidal (saltmarsh) and terrestrial (forest) habitats. Males were encountered more often in the forest habitat, whilst gravid females tended to be more abundant in the marsh habitat but moved more frequently. Food preference was driven by both sex and habitat. The needlerush Juncus was preferred over three other high-marsh detrital food sources, and the periwinkle Littoraria was the preferred prey of male (but not female) crabs from the forest habitats; both male and female crabs from marsh habitat preferred the fiddler crab Uca over three other prey items. In the field, the major food sources were clearly vegetal, but males have a higher trophic position than females. In contrast to food preference, isotope data excluded Uca and Littoraria as major food sources, except for males from the forest, and suggested that Armases consumes a mix of C4 and C3 plants along with animal prey. Digestive enzyme activities differed significantly between sexes and habitats and were higher in females and in marsh crabs. The bacterial hindgut community differed significantly between sexes, but habitat effects were greater than sex effects. By combining multiple measures of feeding ecology, we demonstrate that Armases exhibits sex-specific habitat choice and food preference. By using both coastal forest and saltmarsh habitats, but feeding predominantly in the latter, they possibly act as a key biotic vector of spatial subsidies across habitat borders. The degree of contributing to fluxes of matter, nutrients and energy, however, depends on their sex, indicating that changes in population structure would likely have profound effects on ecosystem connectivity and functioning.

Field-based stable isotope analysis of carbon dioxide by mid-infrared laser spectroscopy for carbon capture and storage monitoring.

A newly developed isotope ratio laser spectrometer for CO2 analyses has been tested during a tracer experiment at the Ketzin pilot site (northern Germany) for CO2 storage. For the experiment, 500 tons of CO2 from a natural CO2 reservoir was injected in supercritical state into the reservoir. The carbon stable isotope value (δ(13)C) of injected CO2 was significantly different from background values. In order to observe the breakthrough of the isotope tracer continuously, the new instruments were connected to a stainless steel riser tube that was installed in an observation well. The laser instrument is based on tunable laser direct absorption in the mid-infrared. The instrument recorded a continuous 10 day carbon stable isotope data set with 30 min resolution directly on-site in a field-based laboratory container during a tracer experiment. To test the instruments performance and accuracy the monitoring campaign was accompanied by daily CO2 sampling for laboratory analyses with isotope ratio mass spectrometry (IRMS). The carbon stable isotope ratios measured by conventional IRMS technique and by the new mid-infrared laser spectrometer agree remarkably well within analytical precision. This proves the capability of the new mid-infrared direct absorption technique to measure high precision and accurate real-time stable isotope data directly in the field. The laser spectroscopy data revealed for the first time a prior to this experiment unknown, intensive dynamic with fast changing δ(13)C values. The arrival pattern of the tracer suggest that the observed fluctuations were probably caused by migration along separate and distinct preferential flow paths between injection well and observation well. The short-term variances as observed in this study might have been missed during previous works that applied laboratory-based IRMS analysis. The new technique could contribute to a better tracing of the migration of the underground CO2 plume and help to ensure the long-term integrity of the reservoir.

Effects of warming and nutrient enrichment on how grazing pressure affects leaf litter-colonizing bacteria.

In view of current scenarios of global environmental change, we investigated the effects of warming and nutrient addition (N and P) on the impact of detritivores on density and community composition of leaf litter-colonizing bacteria in a freshwater environment. Within 10 d, detritivorous amphipods () reduced bacterial numbers at 10°C and to a lesser degree at 15°C. However, the detritivore-induced decrease in bacterial numbers was compensated for by nutrient addition. After 31 d of incubation, amphipods reduced bacterial numbers only at 15°C, and nutrient addition did not counteract detritivore effects. Similarly, changes in bacterial numbers in response to nutrient addition were more pronounced at low temperature within 10 d, whereas nutrient effects were stronger at high temperature after 31 d of incubation. Thus, warming without detritivores did not affect bacterial numbers under low-nutrient conditions (10 d). When detritivores were present, warming increased bacterial density significantly just under high-nutrient conditions ( < 0.05). After 31 d of incubation, warming did not affect bacterial density in detritivore-free controls in both nutrient conditions and did not affect bacterial density in both nutrient conditions in the presence of detritivores. Warming exhibited a significant effect on the composition of litter-associated bacterial communities irrespective of nutrient load ( < 0.05), whereas nutrients had less consistent effects. We conclude that warming, and to a lesser degree nutrient enrichment, may have influence on grazer-induced changes in bacterial biofilm composition, whereas nutrient enrichment may mostly interfere with those processes that depend on bacterial density.

Traits underpinning desiccation resistance explain distribution patterns of terrestrial isopods.

Predicted changes in soil water availability regimes with climate and land-use change will impact the community of functionally important soil organisms, such as macro-detritivores. Identifying and quantifying the functional traits that underlie interspecific differences in desiccation resistance will enhance our ability to predict both macro-detritivore community responses to changing water regimes and the consequences of the associated species shifts for organic matter turnover. Using path analysis, we tested (1) how interspecific differences in desiccation resistance among 22 northwestern European terrestrial isopod species could be explained by three underlying traits measured under standard laboratory conditions, namely, body ventral surface area, water loss rate and fatal water loss; (2) whether these relationships were robust to contrasting experimental conditions and to the phylogenetic relatedness effects being excluded; (3) whether desiccation resistance and hypothesized underlying traits could explain species distribution patterns in relation to site water availability. Water loss rate and (secondarily) fatal water loss together explained 90% of the interspecific variation in desiccation resistance. Our path model indicated that body surface area affects desiccation resistance only indirectly via changes in water loss rate. Our results also show that soil moisture determines isopod species distributions by filtering them according to traits underpinning desiccation resistance. These findings reveal that it is possible to use functional traits measured under standard conditions to predict soil biota responses to water availability in the field over broad spatial scales. Taken together, our results demonstrate an increasing need to generate mechanistic models to predict the effect of global changes on functionally important organisms.

Do ecosystems have functions?

'Ecosystem function' and 'ecosystem functioning' became core keywords in the ecological literature on ecosystems, their structure, development and integrity. We investigate functions from the perspective of causal contributions to higher capacities, as selected effects, as contributions to the stability and self-maintenance of organisms and as type-fixed effects. Based on an in-depth discourse in philosophy of science, we conclude that ecosystems do not have functions in any sense that goes beyond a mere description of a causal contribution. We recommend the terms 'ecosystem function' and 'ecosystem functioning' be avoided in the ecological literature (and beyond).

Influence of changing plant food sources on the gut microbiota of saltmarsh detritivores.

Changes in agricultural land-use of saltmarshes along the German North Sea coast have favoured the succession of the marsh grass Elytrigia atherica over the long-established Spartina anglica. Consequently, E. atherica represents a potential food source of increasing importance for plant-feeding soil detritivores. Considering the importance of this ecological guild for decomposition processes and nutrient cycling, we focussed on two sympatric saltmarsh soil macrodetritivores and their associated gut microbiota to investigate how the digestive processes of these species may be affected by changing plant food sources. Using genetic fingerprints of partial 16S rRNA gene sequences, we analysed composition and diversity of the bacterial gut community in a diplopod and an amphipod crustacean in relation to different feeding regimes representing the natural vegetation changes. Effects of syntopy on the host-specific gut microbiota were also taken into account by feeding the two detritivore species either independently or on the same plant sample. Bacterial community composition was influenced by both the host species and the available plant food sources, but the latter had a stronger effect on microbial community structure. Furthermore, bacterial diversity was highest after feeding on a mixture of both plant species, regardless of the host species. The gut microbiota of these two detritivores can thus be expected to change along with the on-going succession at the plant community level in this environment. Cloning and sequencing of bacterial 16S rRNA gene fragments further indicated a host-related effect since the two detritivores differed in terms of predominant bacterial taxa: diplopods harboured mainly representatives of the phyla Bacteroidetes and Gammaproteobacteria. In contrast, the genus Vibrio was found for the amphipod host across all feeding conditions.

Effects of elevated seawater pCO(2) on gene expression patterns in the gills of the green crab, Carcinus maenas.

BACKGROUND: The green crab Carcinus maenas is known for its high acclimation potential to varying environmental abiotic conditions. A high ability for ion and acid-base regulation is mainly based on an efficient regulation apparatus located in gill epithelia. However, at present it is neither known which ion transport proteins play a key role in the acid-base compensation response nor how gill epithelia respond to elevated seawater pCO(2) as predicted for the future. In order to promote our understanding of the responses of green crab acid-base regulatory epithelia to high pCO(2), Baltic Sea green crabs were exposed to a pCO(2) of 400 Pa. Gills were screened for differentially expressed gene transcripts using a 4,462-feature microarray and quantitative real-time PCR. RESULTS: Crabs responded mainly through fine scale adjustment of gene expression to elevated pCO(2). However, 2% of all investigated transcripts were significantly regulated 1.3 to 2.2-fold upon one-week exposure to CO(2) stress. Most of the genes known to code for proteins involved in osmo- and acid-base regulation, as well as cellular stress response, were were not impacted by elevated pCO(2). However, after one week of exposure, significant changes were detected in a calcium-activated chloride channel, a hyperpolarization activated nucleotide-gated potassium channel, a tetraspanin, and an integrin. Furthermore, a putative syntaxin-binding protein, a protein of the transmembrane 9 superfamily, and a Cl(-)/HCO(3)(-) exchanger of the SLC 4 family were differentially regulated. These genes were also affected in a previously published hypoosmotic acclimation response study. CONCLUSIONS: The moderate, but specific response of C. maenas gill gene expression indicates that (1) seawater acidification does not act as a strong stressor on the cellular level in gill epithelia; (2) the response to hypercapnia is to some degree comparable to a hypoosmotic acclimation response; (3) the specialization of each of the posterior gill arches might go beyond what has been demonstrated up to date; and (4) a re-configuration of gill epithelia might occur in response to hypercapnia.

Monitoring the response of volcanic CO2 emissions to changes in the Los Humeros hydrothermal system.

Carbon dioxide is the most abundant, non-condensable gas in volcanic systems, released into the atmosphere through either diffuse or advective fluid flow. The emission of substantial amounts of CO2 at Earth's surface is not only controlled by volcanic plumes during periods of eruptive activity or fumaroles, but also by soil degassing along permeable structures in the subsurface. Monitoring of these processes is of utmost importance for volcanic hazard analyses, and is also relevant for managing geothermal resources. Fluid-bearing faults are key elements of economic value for geothermal power generation. Here, we describe for the first time how sensitively and quickly natural gas emissions react to changes within a deep hydrothermal system due to geothermal fluid reinjection. For this purpose, we deployed an automated, multi-chamber CO2 flux monitoring system within the damage zone of a deep-rooted major normal fault in the Los Humeros Volcanic Complex (LHVC) in Mexico and recorded data over a period of five months. After removing the atmospheric effects on variations in CO2 flux, we calculated correlation coefficients between residual CO2 emissions and reinjection rates, identifying an inverse correlation of ρ = - 0.51 to - 0.66. Our results indicate that gas emissions respond to changes in reinjection rates within 24 h, proving an active hydraulic communication between the hydrothermal system and Earth's surface. This finding is a promising indication not only for geothermal reservoir monitoring but also for advanced long-term volcanic risk analysis. Response times allow for estimation of fluid migration velocities, which is a key constraint for conceptual and numerical modelling of fluid flow in fracture-dominated systems.

Functional Traits of Terrestrial Plants in the Intertidal: A Review on Mangrove Trees.

AbstractTrue mangroves are vascular plants (Tracheophyta) that evolved into inhabiting the mid and upper intertidal zone of tropical and subtropical soft-sediment coasts around the world. While several dozens of species are known from the Indo-West Pacific region, the Atlantic-East Pacific region is home to only a mere dozen of true mangrove species, most of which are rare. Mangrove trees can form dense monospecific or multispecies stands that provide numerous ecosystem services. Despite their eminent socioecological and socioeconomic relevance and the plethora of studies on mangroves, many details of the ecology of mangrove ecosystems remain unknown; and our knowledge about general ecological principles in mangrove ecosystems is scarce. For instance, the functional trait concept has hardly been applied to mangroves. Here we provide an inventory of 28 quantitative and 8 qualitative functional traits of true mangrove species and stipulate some insight into how these traits may drive ecosystem structure and processes. The differentiation between true mangroves and mangrove associates, which can dwell inside as well as outside mangrove forests, is reflected by a number of leaf traits. Thus, true mangroves exhibit lower specific leaf area, lower leaf N content, and lower K∶Na ratio, and higher leaf succulence, higher Na and Cl content, and higher osmolality than mangrove associates. True mangrove species that form pure stands produce larger leaves and exhibit higher N content per leaf area, higher leaf K and Ca content, greater maximum plant height, longer propagules, and lower root porosity than more sporadic species. The species-specific expression of most traits does not reflect the species' position along intertidal gradients, suggesting that adaptation to tidal inundation does not explain these traits. Rather, many of the traits studied herein exhibit strong phylogenetic signals in true mangroves. Thus, wood density is high in most species of the Rhizophoraceae, irrespective of their habitat or maximum height. On the other hand, species of the genus Sonneratia exhibit low wood density and do not grow taller than 20 m. Some leaf traits of true mangroves are more like those of plants from drier environments, reflecting the perception that a saline environment creates physiological drought stress. Along the same line, most true mangrove species exhibit sclerophyllous leaf traits. The few major mangrove tree species of the Atlantic-East Pacific are as distinct from each other, with regard to some traits, as are the many mangrove species of the Indo-West Pacific. We hypothesize that this phenomenon explains the similarly high biomass of mangrove forests in both the species-rich Indo-West Pacific and the species-poor Atlantic-East Pacific.

Drivers of litter mass loss and faunal composition of detritus patches change over time.

Decomposition of vegetal detritus is one of the most fundamental ecosystem processes. In complex landscapes, the fate of litter of terrestrial plants may depend on whether it ends up decomposing in terrestrial or aquatic conditions. However, (1) to what extent decomposition rates are controlled by environmental conditions or by detritus type, and (2) how important the composition of the detritivorous fauna is in mediating decomposition in different habitats, remain as unanswered questions. We incubated two contrasting detritus types in three distinct habitat types in Coastal Georgia, USA, to test the hypotheses that (1) the litter fauna composition depends on the habitat and the litter type available, and (2) litter mass loss (as a proxy for decomposition) depends on environmental conditions (habitat) and the litter type. We found that the abundance of most taxa of the litter fauna depends primarily on habitat. Litter type became a stronger driver for some taxa over time, but the overall faunal composition was only weakly affected by litter type. Decomposition also depends strongly on habitat, with up to ca. 80% of the initial detrital mass lost over 25 months in the marsh and forest habitats, but less than 50% lost in the creek bank habitat. Mass loss rates of oak versus pine litter differed initially but converged within habitat types within 12 months. We conclude that, although the habitat type is the principle driver of the community composition of the litter fauna, litter type is a significant driver of litter mass loss in the early stages of the decomposition process. With time, however, litter types become more and more similar, and habitat becomes the dominating factor in determining decomposition of older litter. Thus, the major driver of litter mass loss changes over time from being the litter type in the early stages to the habitat (environmental conditions) in later stages.

Co-benefits of protecting mangroves for biodiversity conservation and carbon storage.

The conservation of ecosystems and their biodiversity has numerous co-benefits, both for local societies and for humankind worldwide. While the co-benefit of climate change mitigation through so called blue carbon storage in coastal ecosystems has raised increasing interest in mangroves, the relevance of multifaceted biodiversity as a driver of carbon storage remains unclear. Sediment salinity, taxonomic diversity, functional diversity and functional distinctiveness together explain 69%, 69%, 27% and 61% of the variation in above- and belowground plant biomass carbon, sediment organic carbon and total ecosystem carbon storage, respectively, in the Sundarbans Reserved Forest. Functional distinctiveness had the strongest explanatory power for carbon storage, indicating that blue carbon in mangroves is driven by the functional composition of diverse tree assemblages. Protecting and restoring mangrove biodiversity with site-specific dominant species and other species of contrasting functional traits would have the co-benefit of maximizing their capacity for climate change mitigation through increased carbon storage.

Geological CO2 quantified by high-temporal resolution stable isotope monitoring in a salt mine.

The relevance of CO2 emissions from geological sources to the atmospheric carbon budget is becoming increasingly recognized. Although geogenic gas migration along faults and in volcanic zones is generally well studied, short-term dynamics of diffusive geogenic CO2 emissions are mostly unknown. While geogenic CO2 is considered a challenging threat for underground mining operations, mines provide an extraordinary opportunity to observe geogenic degassing and dynamics close to its source. Stable carbon isotope monitoring of CO2 allows partitioning geogenic from anthropogenic contributions. High temporal-resolution enables the recognition of temporal and interdependent dynamics, easily missed by discrete sampling. Here, data is presented from an active underground salt mine in central Germany, collected on-site utilizing a field-deployed laser isotope spectrometer. Throughout the 34-day measurement period, total CO2 concentrations varied between 805 ppmV (5th percentile) and 1370 ppmV (95th percentile). With a 400-ppm atmospheric background concentration, an isotope mixing model allows the separation of geogenic (16-27%) from highly dynamic anthropogenic combustion-related contributions (21-54%). The geogenic fraction is inversely correlated to established CO2 concentrations that were driven by anthropogenic CO2 emissions within the mine. The described approach is applicable to other environments, including different types of underground mines, natural caves, and soils.

Introducing the Mangrove Microbiome Initiative: Identifying Microbial Research Priorities and Approaches To Better Understand, Protect, and Rehabilitate Mangrove Ecosystems.

Mangrove ecosystems provide important ecological benefits and ecosystem services, including carbon storage and coastline stabilization, but they also suffer great anthropogenic pressures. Microorganisms associated with mangrove sediments and the rhizosphere play key roles in this ecosystem and make essential contributions to its productivity and carbon budget. Understanding this nexus and moving from descriptive studies of microbial taxonomy to hypothesis-driven field and lab studies will facilitate a mechanistic understanding of mangrove ecosystem interaction webs and open opportunities for microorganism-mediated approaches to mangrove protection and rehabilitation. Such an effort calls for a multidisciplinary and collaborative approach, involving chemists, ecologists, evolutionary biologists, microbiologists, oceanographers, plant scientists, conservation biologists, and stakeholders, and it requires standardized methods to support reproducible experiments. Here, we outline the Mangrove Microbiome Initiative, which is focused around three urgent priorities and three approaches for advancing mangrove microbiome research.

Interactive effects of temperature and nutrients on mangrove seedling growth and implications for establishment.

The establishment and wellbeing of seedlings governs the spread and survival of mangrove forests. Eutrophication and global warming are major challenges endangering mangrove ecosystem integrity. How these stressors affect seedling growth is not well understood. In a mesocosm experiment we grew mangrove seedlings in temperature-controlled chambers and investigated single and combined effects of temperature (23 and 33 °C), organic matter and dissolved nutrients on seedling trait morphology. Seedling survival was lowest in organic matter treatments. Combined effects of temperature and nutrients caused significant differences in root morphology with fewer but longer and thicker 3rd order roots, fewer 2nd and no 1st order roots in nutrient-enriched (23 °C) compared to non-enriched treatments (33 °C). Our results indicate these seedlings are less resilient to withstand their dynamic environment, in which they must settle and establish, due to lower root complexity. Mangrove ecosystems are negatively affected by global and local stresses; if new seedlings, which support forest recovery, are also affected then this amplifies stresses.

Host-specificity of environmentally transmitted Mycoplasma-like isopod symbionts.

Mycoplasms are known as pathogens of economic and medical interest in plants, animals and man. Here, we show a positive correlation between the presence of Mycoplasma-like symbionts in their isopod hosts and survivorship on low-quality food. Most isopods that survived feeding on a cellulose-based low-quality diet for 90 days harboured 'Candidatus Hepatoplasma' in their midgut glands, while those that died within 90 days mostly either harboured no or other bacterial symbionts. We detected 'Candidatus Hepatoplasma' in all but one of the examined species of terrestrial isopods from different habitats and locations, suggesting an evolutionarily ancient association between terrestrial isopods and their Mycoplasma-like symbionts. Phylogenetic analyses clustered symbionts from different populations of the same isopod species together, and clearly distinguished between symbionts of different isopod species, indicating host-specificity of 'Candidatus Hepatoplasma', although a previous study provided evidence for environmental symbiont transmission. Nonetheless, horizontal exchange of symbionts between species may have been possible in evolutionary earlier stages, as suggested by only limited congruency of phylogenetic trees of hosts and symbionts. Another symbiont, 'Candidatus Hepatincola porcellionum', was only detected in midgut glands of the most terrestrial tribe of isopods (Crinocheta), suggesting an evolutionarily younger host-symbiont association. This symbiont proved to be negatively correlated with host longevity, even on high-quality food.