Your browser doesn't support javascript.
loading
Mostrar: 20 | 50 | 100
Resultados 1 - 20 de 97
Filtrar
Mais filtros

Intervalo de ano de publicação
1.
Mol Ecol ; 32(23): 6523-6542, 2023 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-35976262

RESUMO

The animal gut microbiome has been implicated in a number of key biological processes, ranging from digestion to behaviour, and has also been suggested to facilitate local adaptation. Yet studies in wild animals rarely compare multiple populations that differ ecologically, which is the level at which local adaptation may occur. Further, few studies simultaneously characterize diet and gut microbiome from the same sample, despite their probable interdependence. Here, we investigate the interplay between diet and gut microbiome in three geographically isolated populations of the critically endangered Grauer's gorilla (Gorilla beringei graueri), which we show to be genetically differentiated. We find population- and social group-specific dietary and gut microbial profiles and covariation between diet and gut microbiome, despite the presence of core microbial taxa. There was no detectable effect of age, and only marginal effects of sex and genetic relatedness on the microbiome. Diet differed considerably across populations, with the high-altitude population consuming a lower diversity of plants compared to low-altitude populations, consistent with plant availability constraining dietary choices. The observed pattern of covariation between diet and gut microbiome is probably a result of long-term social and environmental factors. Our study suggests that the gut microbiome is sufficiently plastic to support flexible food selection and hence contribute to local adaptation.


Assuntos
Microbioma Gastrointestinal , Gorilla gorilla , Animais , Gorilla gorilla/genética , Microbioma Gastrointestinal/genética , Animais Selvagens/genética , Dieta , Altitude , Plantas/genética , RNA Ribossômico 16S/genética
2.
Conserv Biol ; 37(6): e14151, 2023 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-37489269

RESUMO

Identifying threatened ecosystem types is fundamental to conservation and management decision-making. When identification relies on expert judgment, decisions are vulnerable to inconsistent outcomes and can lack transparency. We elicited judgements of the occurrence of a widespread, critically endangered Australian ecosystem from a diverse pool of 83 experts. We asked 4 questions. First, how many experts are required to reliably conclude that the ecosystem is present? Second, how many experts are required to build a reliable model for predicting ecosystem presence? Third, given expert selection can narrow the range opinions, if enough experts are selected, do selection strategies affect model predictions? Finally, does a diverse selection of experts provide better model predictions? We used power and sample size calculations with a finite population of 200 experts to calculate the number of experts required to reliably assess ecosystem presence in a theoretical scenario. We then used boosted regression trees to model expert elicitation of 122 plots based on real-world data. For a reliable consensus (90% probability of correctly identifying presence and absence) in a relatively certain scenario (85% probability of occurrence), at least 17 experts were required. More experts were required when occurrence was less certain, and fewer were needed if permissible error rates were relaxed. In comparison, only ∼20 experts were required for a reliable model that could predict for a range of scenarios. Expert selection strategies changed modeled outcomes, often overpredicting presence and underestimating uncertainty. However, smaller but diverse pools of experts produced outcomes similar to a model built from all contributing experts. Combining elicited judgements from a diverse pool of experts in a model-based decision support tool provided an efficient aggregation of a broad range of expertise. Such models can improve the transparency and consistency of conservation and management decision-making, especially when ecosystems are defined based on complex criteria.


La importancia de seleccionar expertos para identificar ecosistemas amenazados Resumen La identificación de los tipos de ecosistemas amenazados es fundamental para decidir sobre su conservación y gestión. Cuando la identificación se basa en la opinión de expertos, las decisiones son vulnerables a resultados incoherentes y pueden carecer de transparencia. Recabamos la opinión de 83 expertos sobre la presencia de un ecosistema australiano extendido y en peligro crítico. Se plantearon cuatro preguntas: ¿Cuántos expertos son necesarios para concluir con fiabilidad que el ecosistema está presente?; ¿Cuántos expertos son necesarios para construir un modelo fiable de predicción de la presencia del ecosistema?; ya que la selección de expertos puede reducir el rango de opiniones, si se seleccionan suficientes expertos, ¿afectan las estrategias de selección a las predicciones del modelo; y ¿Una selección diversa de expertos proporciona mejores predicciones del modelo? Utilizamos cálculos de potencia y tamaño de muestra con una población finita de 200 expertos para obtener el número de expertos necesarios para evaluar de forma fiable la presencia de ecosistemas en un escenario teórico. Después usamos árboles de regresión reforzada para modelar la consulta de expertos de 122 parcelas basadas en datos del mundo real. Para obtener un consenso fiable (90% de probabilidad de identificar correctamente la presencia y la ausencia) en un escenario relativamente seguro (85% de probabilidad de ocurrencia), se necesitaban al menos 17 expertos. Se necesitaban más expertos cuando la ocurrencia era menos segura, y menos si se relajaban los porcentajes de error permitidos. En comparación, sólo se necesitaron unos 20 expertos para obtener un modelo fiable que pudiera predecir una serie de escenarios. Las estrategias de selección de expertos modificaron los resultados modelados, a menudo con sobre predicción de la presencia y subestimación de la incertidumbre. Sin embargo, los grupos de expertos más pequeños pero diversos produjeron resultados similares a los de un modelo construido a partir de todos los expertos participantes. La combinación de las opiniones obtenidas de un grupo diverso de expertos en una herramienta de apoyo a la toma de decisiones basada en un modelo proporcionó una agregación eficiente de una amplia gama de conocimientos. Estos modelos pueden mejorar la transparencia y coherencia de la toma de decisiones en materia de conservación y gestión, especialmente cuando los ecosistemas se definen en función de criterios complejos.


Assuntos
Conservação dos Recursos Naturais , Ecossistema , Austrália , Incerteza , Julgamento
3.
J Fish Biol ; 103(3): 516-528, 2023 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-37246738

RESUMO

Morphological similarities between skates of the genus Dipturus in the north-eastern Atlantic and Mediterranean have resulted in longstanding confusion, misidentification and misreporting. Current evidence indicates that the common skate is best explained as two species, the flapper skate (Dipturus intermedius) and the common blue skate (D. batis). However, some management and conservation initiatives developed prior to the separation continue to refer to common skate (as 'D. batis'). This taxonomic uncertainty can lead to errors in estimating population viability, distribution range, and impact on fisheries management and conservation status. Here, we demonstrate how a concerted taxonomic approach, using molecular data and a combination of survey, angler and fisheries data, in addition to expert witness statements, can be used to build a higher resolution picture of the current distribution of D. intermedius. Collated data indicate that flapper skate has a more constrained distribution compared to the perceived distribution of the 'common skate', with most observations recorded from Norway and the western and northern seaboards of Ireland and Scotland, with occasional specimens from Portugal and the Azores. Overall, the revised spatial distribution of D. intermedius has significantly reduced the extant range of the species, indicating a possibly fragmented distribution range.


Assuntos
Rajidae , Animais , Rajidae/anatomia & histologia , Irlanda , Portugal , Escócia , Pesqueiros
4.
J Fish Biol ; 103(1): 179-182, 2023 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-37013794

RESUMO

The temporal effects of ethanol preservation on the δ13 C and δ15 N values of tissues excised from European eel Anguilla anguilla were assessed. Preservation significantly enriched 13 C values of fin and mucus but not dorsal muscle. The 13 C enrichment occurred in the initial 15 days of preservation and was independent of initial eel mass. Tissue preservation effects on δ15 N values were negligible. These tissue-specific isotopic shifts should be considered when ethanol-preserved eel samples are used.


Assuntos
Anguilla , Animais , Anguilla/fisiologia , Etanol , Preservação Biológica
5.
Int J Mol Sci ; 24(19)2023 Oct 01.
Artigo em Inglês | MEDLINE | ID: mdl-37834264

RESUMO

The European mink Mustela lutreola (Mustelidae) ranks among the most endangered mammalian species globally, experiencing a rapid and severe decline in population size, density, and distribution. Given the critical need for effective conservation strategies, understanding its genomic characteristics becomes paramount. To address this challenge, the platinum-quality, chromosome-level reference genome assembly for the European mink was successfully generated under the project of the European Mink Centre consortium. Leveraging PacBio HiFi long reads, we obtained a 2586.3 Mbp genome comprising 25 scaffolds, with an N50 length of 154.1 Mbp. Through Hi-C data, we clustered and ordered the majority of the assembly (>99.9%) into 20 chromosomal pseudomolecules, including heterosomes, ranging from 6.8 to 290.1 Mbp. The newly sequenced genome displays a GC base content of 41.9%. Additionally, we successfully assembled the complete mitochondrial genome, spanning 16.6 kbp in length. The assembly achieved a BUSCO (Benchmarking Universal Single-Copy Orthologs) completeness score of 98.2%. This high-quality reference genome serves as a valuable genomic resource for future population genomics studies concerning the European mink and related taxa. Furthermore, the newly assembled genome holds significant potential in addressing key conservation challenges faced by M. lutreola. Its applications encompass potential revision of management units, assessment of captive breeding impacts, resolution of phylogeographic questions, and facilitation of monitoring and evaluating the efficiency and effectiveness of dedicated conservation strategies for the European mink. This species serves as an example that highlights the paramount importance of prioritizing endangered species in genome sequencing projects due to the race against time, which necessitates the comprehensive exploration and characterization of their genomic resources before their populations face extinction.


Assuntos
Espécies em Perigo de Extinção , Vison , Animais , Vison/genética , Platina , Conservação dos Recursos Naturais , Genômica
6.
Mol Biol Rep ; 48(1): 997-1004, 2021 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-33394229

RESUMO

Recently, Pinna nobilis pen shells population in Mediterranean Sea has plummeted due to a Mass Mortality Event caused by an haplosporidian parasite. In consequence, this bivalve species has been included in the IUCN Red List as "Critically Endangered". In the current scenario, several works are in progress to protect P. nobilis from extinction, being identification of hybrids (P. nobilis x P. rudis) among survivors extremely important for the conservation of the species.Morphological characteristics and molecular analyses were used to identify putative hybrids. A total of 10 individuals of each species (P. nobilis and P. rudis) and 3 doubtful individuals were considered in this study. The putative hybrids showed shell morphology and mantle coloration intermingled exhibiting both P. nobilis and P. rudis traits. Moreover, the analyses of 1150 bp of the 28S gene showed 9 diagnostic sites between P. rudis and P. nobilis, whereas hybrids showed both parental diagnostic alleles at the diagnostic loci. Regarding the multilocus genotypes from the 8 microsatellite markers, the segregation of two Pinna species was clearly detected on the PCoA plot and the 3 hybrids showed intermediate positions.This is the first study evidencing the existence of hybrids P. nobilis x P. rudis, providing molecular methodology for a proper identification of new hybrids. Further studies testing systematically all parasite-resisting isolated P. nobilis should be undertaken to determine if the resistance is resulting from introgression of P. rudis into P. nobilis genome and identifying aspects related to resistance.


Assuntos
Bivalves/genética , Quimera/genética , Resistência à Doença/genética , Loci Gênicos , Haplosporídios/patogenicidade , Alelos , Animais , Bivalves/classificação , Bivalves/imunologia , Bivalves/parasitologia , Quimera/imunologia , Cruzamentos Genéticos , Resistência à Doença/imunologia , Espécies em Perigo de Extinção , Genótipo , Haplosporídios/crescimento & desenvolvimento , Mar Mediterrâneo , Repetições de Microssatélites , Filogenia , Análise de Componente Principal
7.
Appl Microbiol Biotechnol ; 105(8): 3087-3099, 2021 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-33829315

RESUMO

Decalepis salicifolia (Bedd. ex. Hook.f.) Venter is a potential natural source of the vanillin isomer, 2-hydroxy-4-methoxybenzaldehyde (2H4MB), an aromatic compound. However, the utilization of the plant is hindered especially due to its critically endangered status and the root-specific accumulation of the compound. The use of in vitro culture techniques offers a sustainable means for the production of valuable metabolites. In this study, an efficient system was established for the production of 2H4MB in the adventitious root cultures of D. salicifolia. Leaf explants of in vitro grown plants produced on an average 4.33 ± 2.07 number of roots with root initiation frequency of 95.69 ± 3.74% in woody plant medium supplemented with 0.5 mg/L α-naphthalene acetic acid (NAA) and 1.0 mg/L kinetin (Kn). The adventitious root biomass accumulation of 10.61 ± 0.89 g fresh weight (FW) was obtained in woody plant liquid media containing 0.5 mg/L NAA and 0.3 mg/L indole-3-butyric acid (IBA) in 60 days of inoculation. Field-grown plants of the same age produced 0.30 ± 0.02 g FW, which was 35-fold lower than the adventitious root culture. The total production of 2H4MB in the same growth period was 4.9-fold higher in adventitious root culture (139.54 µg) as compared to field-grown plants (28.62 µg). Furthermore, sucrose concentration of 2% was favorable for biomass accumulation, whereas 5% was favorable for 2H4MB production. On the other hand, media pH 5.0 was suitable for biomass production and pH 7.0 was best suited for accumulation of 2H4MB. The adventitious roots also showed stable production of biomass and 2H4MB over 2 years. The established adventitious root culture system is suitable for further large-scale production of 2H4MB for flavor and fragrance industrial applications. KEY POINTS: • Biomass accumulation was higher in adventitious root cultures than in field-grown plants. • Manipulation of sucrose concentration and media pH led to increased 2H4MB production. • Adventitious roots showed stable biomass and 2H4MB production over 2 years.


Assuntos
Benzaldeídos , Raízes de Plantas , Folhas de Planta
8.
Zoo Biol ; 40(1): 76-78, 2021 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-33107113

RESUMO

A pivotal debate on biodiversity conservation is whether the scarce budgets must be invested in critically endangered taxa or in those with higher chances to survive due to larger population sizes. Addressing the fate of extremely bottlenecked taxa is an ideal way to test this idea, but empirical cases are surprisingly limited. The reintroduction of the extinct-in-the-wild Alagoas curassow (Pauxi mitu) by Brazilian scientists in September 2019 added to the two other known cases of survival to bottlenecks of only two or three individuals. We exploit the reasons why this species has survived, and we report how investments to rescue the Alagoas curassow resulted in the protection of many other taxa, suggesting that in the face of the dramatic number of extinctions expected for the Anthropocene, integration must prevail over a choice.


Assuntos
Conservação dos Recursos Naturais/métodos , Espécies em Perigo de Extinção , Galliformes/genética , Animais , Brasil , Cruzamento/métodos , Feminino , Masculino
9.
Molecules ; 26(1)2020 Dec 25.
Artigo em Inglês | MEDLINE | ID: mdl-33375725

RESUMO

The genus Aldrovanda is a Palaeogene element containing a single extant species, Aldrovanda vesiculosa L. This aquatic carnivorous herb has a very wide range of distribution, natively covering four continents; however, it is a critically endangered aquatic plant species worldwide. Previous studies revealed that A. vesiculosa had an extremely low genetic variation. The main aim of the present paper is to explore, using chemometric tools, the diversity of 16 A. vesiculosa populations from various sites from four continents (Eurasia, Africa, Australia). Using chemometric data as markers for genetic diversity, we show the relationships of 16 A. vesiculosa populations from various sites, including four continents. Phytochemical markers allowed the identification of five well-supported (bootstrap > 90%) groups among the 16 populations sampled. The principal component analysis data support the idea that the strongly related African (Botswana) and Australian (Kimberley, NT, NW Australia) populations are the most distant ones, separated from the European and Asian ones. However, considering the five Australian populations sampled, three are nested within the Eurasian group. The chemometric data are correlated positively with the geographical distances between the samples, which suggests a tendency toward isolation for the most distant populations.


Assuntos
Droseraceae/genética , Variação Genética/genética , População/genética , África , Austrália , Droseraceae/química , Modelos Biológicos , Filogenia
10.
J Phycol ; 55(6): 1412-1415, 2019 12.
Artigo em Inglês | MEDLINE | ID: mdl-31339181

RESUMO

We report the reappearance of the rare charophyte Nitella translucens in Poland. It was identified in the soft-water lobelian Lake Jelen (North Poland) during 2013 and 2018 phytolittoral surveys. This species is considered critically endangered in various European countries and was previously classified as extinct in Poland. Its occurrence was confirmed using morphological and molecular data (ITS1-18S, ITS2-28S, rDNA, and rbcL). The N. translucens occupied ~20% of the lake bottom, at depths of 1.5-6.5 m, water pH 7.5-8.6, conductivity of 59-66 µS · cm-1 , and total nitrogen and phosphorus during growing season in the range of 1.1-1.4 mg · L-1 and 0.07-0.1 mg · L-1 , respectively. It co-occurred mainly with plant species typical for lobelia lakes: Isoetes lacustris, Littorella uniflora, and Myriophyllum alterniflorum, as well as Ceratophyllum demersum and Elodea canadensis, which are characteristic for eutrophicated waters. It appears that N. translucens may thrive in lobelia lakes during their transformation to more eutrophic states.


Assuntos
Carofíceas , Nitella , Europa (Continente) , Lagos , Fósforo , Polônia
11.
Parasitol Res ; 117(10): 3347-3350, 2018 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-30182257

RESUMO

The riparian European mink (Mustela lutreola), currently surviving in only three unconnected sites in Europe, is now listed as a critically endangered species in the IUCN Red List of Threatened Species. Habitat loss and degradation, anthropogenic mortality, interaction with the feral American mink (Neovison vison), and infectious diseases are among the main causes of its decline. In the Spanish Foral Community of Navarra, where the highest density of M. lutreola in its western population has been detected, different studies and conservation measures are ongoing, including health studies on European mink, and invasive American mink control. We report here a case of severe parasitism with progressive physiological exhaustion in an aged free-ranging European mink female, which was accidentally captured and subsequently died in a live-trap targeting American mink. Checking of the small intestine revealed the presence of 17 entangled Versteria mustelae worms. To our knowledge, this is the first description of hyperinfestation by tapeworms in this species.


Assuntos
Infecções por Cestoides/veterinária , Vison/parasitologia , Platelmintos/fisiologia , Animais , Infecções por Cestoides/epidemiologia , Infecções por Cestoides/parasitologia , Espécies em Perigo de Extinção/estatística & dados numéricos , Europa (Continente)/epidemiologia , Feminino , Masculino , Platelmintos/genética , Platelmintos/isolamento & purificação , Espanha/epidemiologia
12.
Proc Biol Sci ; 284(1849)2017 02 22.
Artigo em Inglês | MEDLINE | ID: mdl-28202810

RESUMO

Estimating the absolute number of individuals in populations and their fecundity is central to understanding the ecosystem role of species and their population dynamics as well as allowing informed conservation management for endangered species. Estimates of abundance and fecundity are often difficult to obtain for rare or cryptic species. Yet, in addition, here we show for a charismatic group, sea turtles, that are neither cryptic nor rare and whose nesting is easy to observe, that the traditional approach of direct observations of nesting has likely led to a gross overestimation of the number of individuals in populations and underestimation of their fecundity. We use high-resolution GPS satellite tags to track female green turtles throughout their nesting season in the Chagos Archipelago (Indian Ocean) and assess when and where they nested. For individual turtles, nest locations were often spread over several tens of kilometres of coastline. Assessed by satellite observations, a mean of 6.0 clutches (range 2-9, s.d. = 2.2) was laid by individuals, about twice as many as previously assumed, a finding also reported in other species and ocean basins. Taken together, these findings suggest that the actual number of nesting turtles may be almost 50% less than previously assumed.


Assuntos
Conservação dos Recursos Naturais , Tartarugas , Animais , Ecossistema , Espécies em Perigo de Extinção , Feminino , Sistemas de Informação Geográfica , Oceano Índico , Comportamento de Nidação
13.
Dis Aquat Organ ; 123(3): 257-262, 2017 03 21.
Artigo em Inglês | MEDLINE | ID: mdl-28322212

RESUMO

Direct observations of the causes of injuries to cetaceans are rare events. For very small and declining populations, such events may be even less likely to be observed because of the few individuals that remain. A long-term monitoring program using photographic identification of individuals resulted in the documentation of an individual Taiwanese humpback dolphin Sousa chinensis taiwanensis that survived a harmful interaction with fishing gear. An adult female that was accompanied by a young calf sustained massive damage to several tissue types on her dorsal surface. From the injuries, it is clear that the animal had suffered intense trauma that likely caused pain for several months as the fishing gear sliced through its dorsal hump and fin. Given the incredible mutilation, the animal is likely compromised at some level and probably continues to experience ongoing pain. This case, along with observations of other individuals in this population bearing serious injuries or being entangled in fishing gear, is direct evidence that the impacts of local fisheries on this subspecies are almost certainly unsustainable.


Assuntos
Golfinhos , Espécies em Perigo de Extinção , Ferimentos e Lesões/veterinária , Bem-Estar do Animal , Animais , Feminino , Pesqueiros
14.
Mol Ecol ; 25(15): 3540-56, 2016 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-27273107

RESUMO

Evidence-based conservation planning is crucial for informing management decisions for species of extreme rarity, but collection of robust data on genetic status or other parameters can be extremely challenging for such species. The Hainan gibbon, possibly the world's rarest mammal, consists of a single population of ~25 individuals restricted to one protected area on Hainan Island, China, and has persisted for over 30 years at exceptionally low population size. Analysis of genotypes at 11 microsatellite loci from faecal samples for 36% of the current global population and tissue samples from 62% of existing historical museum specimens demonstrates limited current genetic diversity (Na = 2.27, Ar = 2.24, He  = 0.43); diversity has declined since the 19th century and even further within the last 30 years, representing declines of ~30% from historical levels (Na = 3.36, Ar = 3.29, He  = 0.63). Significant differentiation is seen between current and historical samples (FST  = 0.156, P = 0.0315), and the current population exhibits extremely small Ne (current Ne  = 2.16). There is evidence for both a recent population bottleneck and an earlier bottleneck, with population size already reasonably low by the late 19th century (historical Ne  = 1162.96). Individuals in the current population are related at the level of half- to full-siblings between social groups, and full-siblings or parent-offspring within a social group, suggesting that inbreeding is likely to increase in the future. The species' current reduced genetic diversity must be considered during conservation planning, particularly for expectations of likely population recovery, indicating that intensive, carefully planned management is essential.


Assuntos
Espécies em Perigo de Extinção , Variação Genética , Genética Populacional , Hylobates/genética , Animais , China , Conservação dos Recursos Naturais , Genótipo , Ilhas , Masculino , Repetições de Microssatélites
15.
Mol Ecol ; 25(16): 3962-73, 2016 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-27314880

RESUMO

The Devils Hole pupfish (Cyprinodon diabolis; DHP) is an icon of conservation biology. Isolated in a 50 m(2) pool (Devils Hole), DHP is one of the rarest vertebrate species known and an evolutionary anomaly, having survived in complete isolation for thousands of years. However, recent findings suggest DHP might be younger than commonly thought, potentially introduced to Devils Hole by humans in the past thousand years. As a result, the significance of DHP from an evolutionary and conservation perspective has been questioned. Here we present a high-resolution genomic analysis of DHP and two closely related species, with the goal of thoroughly examining the temporal divergence of DHP. To this end, we inferred the evolutionary history of DHP from multiple random genomic subsets and evaluated four historical scenarios using the multispecies coalescent. Our results provide substantial information regarding the evolutionary history of DHP. Genomic patterns of secondary contact present strong evidence that DHP were isolated in Devils Hole prior to 20-10 ka and the model best supported by geological history and known mutation rates predicts DHP diverged around 60 ka, approximately the same time Devils Hole opened to the surface. We make the novel prediction that DHP colonized and have survived in Devils Hole since the cavern opened, and the two events (colonization and collapse of the cavern's roof) were caused by a common geologic event. Our results emphasize the power of evolutionary theory as a predictive framework and reaffirm DHP as an important evolutionary novelty, worthy of continued conservation and exploration.


Assuntos
Evolução Biológica , Peixes Listrados/genética , Filogenia , Animais , Conservação dos Recursos Naturais , Clima Desértico , Espécies em Perigo de Extinção , Fluxo Gênico , Genômica , Modelos Genéticos , Taxa de Mutação , Polimorfismo de Nucleotídeo Único , Estados Unidos
16.
Mol Phylogenet Evol ; 94(Pt A): 346-57, 2016 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-26424382

RESUMO

The European sturgeon (Acipenser sturio) was once a common species throughout Europe, but the sole remaining natural population presently inhabits the Gironde Estuary in France (Atlantic coast). The species was classified as 'Critically Endangered' in 1996, and the Gironde population is now on the verge of extinction. In this setting, and for the first time, we present the past phylogeographical features of this species throughout Europe along with an assessment of its former genetic diversity. This study was based on a molecular analysis (mtDNA CR sequencing) of 10 living specimens from the Gironde Estuary, 55 museum specimens that had been caught along 19th and 20th centuries, and 59 archaeological remains dating back to 260-5000years BP, from which mitochondrial DNA was extracted and amplified. Although discontinuous, the produced data provided a realistic image of the former structure of A. sturio in Europe. Reconstruction of the phylogenetic trees and haplotypes network led to the identification of several clades. The mitochondrial genetic diversity of this species was found to be much greater at the core (Iberian Peninsula, Mediterranean and Adriatic regions) than along the margins (Atlantic-Northern Europe, Black Sea) of its range. A series of hypotheses on the dates and causes of changes in the species' major structures are put forward on the basis of these data. Finally, competition with A. oxyrinchus, a sibling species whose presence in Northern Europe was recently reconsidered, is presented as a major factor in the evolution of this species.


Assuntos
Espécies em Perigo de Extinção , Peixes/classificação , Peixes/genética , Animais , Mar Negro , DNA Mitocondrial/análise , DNA Mitocondrial/genética , França , Variação Genética , Haplótipos , Filogenia , Filogeografia
17.
Ecology ; 97(12): 3346-3358, 2016 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-27912016

RESUMO

Plant-soil feedback, the reciprocal relationship between a plant and its associated microbial communities, has been proposed to be an important driver of plant populations and community dynamics. While rarely considered, understanding how plant-soil feedback contributes to plant rarity may have implications for conservation and management of rare species. Wollemi pine (Wollemia nobilis) is a critically endangered species, of which fewer than 100 trees are known to exist in the wild. Seedling survival within the first year after germination and subsequent recruitment of Wollemi pine is limited in the wild. We used a plant-soil feedback approach to investigate the functional effect of species-specific differences previously observed in the microbial communities underneath adult Wollemi pine and a neighboring species, coachwood (Ceratopetalum apetalum), and also whether additional variation in microbial communities in the wild could impact seedling growth. There was no evidence for seedling growth being affected by tree species associated with soil inocula, suggesting that plant-soil feedbacks are not limiting recruitment in the natural population. However, there was evidence of fungal, but not bacterial, community variation impacting seedling growth independently of plant-soil feedbacks. Chemical (pH) and physical (porosity) soil characteristics were identified as potential drivers of the functional outcomes of these fungal communities. The empirical approach described here may provide opportunities to identify the importance of soil microbes to conservation efforts targeting other rare plant species and is also relevant to understanding the importance of soil microbes and plant-soil feedbacks for plant community dynamics more broadly.


Assuntos
Espécies em Perigo de Extinção , Raízes de Plantas/crescimento & desenvolvimento , Plântula/crescimento & desenvolvimento , Microbiologia do Solo , Traqueófitas/crescimento & desenvolvimento , Raízes de Plantas/microbiologia , Plântula/microbiologia
18.
J Hered ; 107(6): 496-503, 2016 11.
Artigo em Inglês | MEDLINE | ID: mdl-27466386

RESUMO

Conservation of the evolutionary legacy of endangered species is a key component for long-term persistence. Totoaba is a long-lived fish endemic to the Gulf of California and is considered critically endangered. There is currently a debate concerning its conservation status and whether it can be used as a fishery resource. Unfortunately, basic information on biological and genetic population structure of the species is lacking. We sampled 313 individuals and employed 16 microsatellite loci and 3 mitochondrial DNA markers (16S, 547 pb; COI, 619 pb; control region, 650 pb) to assess population structure and demography of totoaba in the Gulf of California, with samples from locations that encompass nearly all of its recognized geographic distribution. We could not reject a hypothesis of panmixia for totoaba, using nuclear or mitochondrial markers. Demographic analysis of mtDNA suggests a sudden population expansion model. The results have important implications for totoaba conservation because poaching is a significant conservation challenge and could have additive negative effects over the single population of totoaba in the Gulf of California.


Assuntos
Espécies em Perigo de Extinção , Peixes/genética , Animais , Biodiversidade , California , Conservação dos Recursos Naturais , DNA Mitocondrial , Peixes/classificação , Variação Genética , Genética Populacional , Haplótipos , Repetições de Microssatélites , Filogenia
19.
Adv Mar Biol ; 73: 91-117, 2016.
Artigo em Inglês | MEDLINE | ID: mdl-26790889

RESUMO

The humpback dolphins of the eastern Taiwan Strait were first discovered scientifically in 2002 and since then have received much research attention. We reviewed all information published in peer-reviewed scientific journals on these dolphins and where appropriate and available, peer-reviewed scientific workshop reports and graduate theses were also examined. Recent evidence demonstrated that this population warranted recognition as a subspecies, Sousa chinensis taiwanensis. It is found in a highly restricted and linear strip of coastal waters along central western Taiwan. Numbering fewer than 80 individuals and declining, five main threats (fisheries interactions, habitat loss and degradation, loss of freshwater to estuaries within their habitat, air and water pollution, and noise) threaten the future existence of this subspecies. These dolphins have cultural and religious importance and boast the highest level of legal protection for wildlife in Taiwan. However, despite enormous efforts by local and international non-governmental groups urging immediate conservation actions, there have been no real government efforts to mitigate any existing threats; instead, some of these threats have worsened. Based on recent studies, we suggest the IUCN Red List status be revised to Critically Endangered CR 2a(ii); D for the subspecies.


Assuntos
Conservação dos Recursos Naturais , Golfinhos/classificação , Golfinhos/fisiologia , Espécies em Perigo de Extinção , Distribuição Animal , Animais , Ecossistema , Dinâmica Populacional , Taiwan
20.
J Environ Manage ; 154: 293-8, 2015 May 01.
Artigo em Inglês | MEDLINE | ID: mdl-25748596

RESUMO

Tourism and recreation are diverse and popular activities. They may also contribute to the risk of extinction for some plants because of the range and severity of their impacts, including in protected areas: but which species, where and how? To evaluate the extent to which tourism and recreation may be threatening process for plants, we conducted a continental level review of listed threats to endangered vascular plants using data from Australia. Of the 659 vascular plant species listed as critically endangered or endangered by the Australian Government, tourism and recreation were listed as a threat(s) for 42%. This is more than those listed as threatened by climate change (26%) and close to the proportion listed as threatened by altered fire regimes (47%). There are plant species with tourism and recreation listed threats in all States and Territories and from all but one bioregion in Australia. Although more than 45 plant families have species with tourism and recreation listed as threats, orchids were the most common species listed as at risk from these threats (90 species). The most common types of threats listed were visitors collecting plants in protected areas (113 species), trampling by hikers and others (84 species), damage from recreational vehicles (59 species) and road infrastructure (39 species). Despite the frequency with which tourism and recreation were listed as threats in Australia, research quantifying these threats and methods to ameliorate their impacts are still limited. Although this lack of information contributes to the challenge of managing tourism and recreation, impacts from visitors will often be easier to manage within natural areas than those from larger scale threats such as altered fire regimes and climate change.


Assuntos
Biodiversidade , Conservação dos Recursos Naturais , Desenvolvimento Vegetal , Viagem , Austrália , Humanos
SELEÇÃO DE REFERÊNCIAS
DETALHE DA PESQUISA