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1.
Development ; 150(15)2023 08 01.
Artigo em Inglês | MEDLINE | ID: mdl-37522363

RESUMO

Xenopus laevis tadpoles can regenerate whole tails after amputation. We have previously reported that interleukin 11 (il11) is required for tail regeneration. In this study, we have screened for genes that support tail regeneration under Il11 signaling in a certain cell type and have identified the previously uncharacterized genes Xetrov90002578m.L and Xetrov90002579m.S [referred to hereafter as regeneration factors expressed on myeloid.L (rfem.L) and rfem.S]. Knockdown (KD) of rfem.L and rfem.S causes defects of tail regeneration, indicating that rfem.L and/or rfem.S are required for tail regeneration. Single-cell RNA sequencing (scRNA-seq) revealed that rfem.L and rfem.S are expressed in a subset of leukocytes with a macrophage-like gene expression profile. KD of colony-stimulating factor 1 (csf1), which is essential for macrophage differentiation and survival, reduced rfem.L and rfem.S expression levels and the number of rfem.L- and rfem.S-expressing cells in the regeneration bud. Furthermore, forced expression of rfem.L under control of the mpeg1 promoter, which drives rfem.L in macrophage-like cells, rescues rfem.L and rfem.S KD-induced tail regeneration defects. Our findings suggest that rfem.L or rfem.S expression in macrophage-like cells is required for tail regeneration.


Assuntos
Interleucina-11 , Transdução de Sinais , Animais , Xenopus laevis/genética , Xenopus laevis/metabolismo , Interleucina-11/metabolismo , Larva/genética , Transdução de Sinais/genética , Macrófagos , Cauda
2.
Development ; 147(3)2020 02 05.
Artigo em Inglês | MEDLINE | ID: mdl-31988186

RESUMO

Regeneration-competent vertebrates are considered to suppress inflammation faster than non-regenerating ones. Hence, understanding the cellular mechanisms affected by immune cells and inflammation can help develop strategies to promote tissue repair and regeneration. Here, we took advantage of naturally occurring tail regeneration-competent and -incompetent developmental stages of Xenopus tadpoles. We first establish the essential role of the myeloid lineage for tail regeneration in the regeneration-competent tadpoles. We then reveal that upon tail amputation there is a myeloid lineage-dependent change in amputation-induced apoptosis levels, which in turn promotes tissue remodelling, and ultimately leads to the relocalization of the regeneration-organizing cells responsible for progenitor proliferation. These cellular mechanisms failed to be executed in regeneration-incompetent tadpoles. We demonstrate that regeneration incompetency is characterized by inflammatory myeloid cells whereas regeneration competency is associated with reparative myeloid cells. Moreover, treatment of regeneration-incompetent tadpoles with immune-suppressing drugs restores myeloid lineage-controlled cellular mechanisms. Collectively, our work reveals the effects of differential activation of the myeloid lineage on the creation of a regeneration-permissive environment and could be further exploited to devise strategies for regenerative medicine purposes.


Assuntos
Linhagem da Célula/fisiologia , Células Mieloides/fisiologia , Regeneração/fisiologia , Cauda/fisiologia , Xenopus laevis/fisiologia , Animais , Apoptose/efeitos dos fármacos , Matriz Extracelular/metabolismo , Expressão Gênica , Regulação da Expressão Gênica no Desenvolvimento , Imunossupressores/farmacologia , Larva/fisiologia , Regeneração/efeitos dos fármacos , Medicina Regenerativa/métodos
3.
Dev Biol ; 473: 59-70, 2021 05.
Artigo em Inglês | MEDLINE | ID: mdl-33484704

RESUMO

Xenopus tadpoles are a unique model for regeneration in that they exhibit two distinct phases of age-specific regenerative competence. In Xenopus laevis, young tadpoles fully regenerate following major injuries such as tail transection, then transiently lose regenerative competence during the "refractory period" from stages 45-47. Regenerative competence is then regained in older tadpoles before being permanently lost during metamorphosis. Here we show that a similar refractory period exists in X. tropicalis. Notably, tadpoles lose regenerative competence gradually in X. tropicalis, with full regenerative competence lost at stage 47. We find that the refractory period coincides closely with depletion of maternal yolk stores and the onset of independent feeding, and so we hypothesized that it might be caused in part by nutrient stress. In support of this hypothesis, we find that cell proliferation declines throughout the tail as the refractory period approaches. When we block nutrient mobilization by inhibiting mTOR signaling, we find that tadpole growth and regeneration are reduced, while yolk stores persist. Finally, we are able to restore regenerative competence and cell proliferation during the refractory period by abundantly feeding tadpoles. Our study argues that nutrient stress contributes to lack of regenerative competence and introduces the X. tropicalis refractory period as a valuable new model for interrogating how metabolic constraints inform regeneration.


Assuntos
Regeneração/fisiologia , Cauda/fisiologia , Xenopus/embriologia , Animais , Proliferação de Células , Gema de Ovo , Larva/metabolismo , Metamorfose Biológica/fisiologia , Nutrientes , Transdução de Sinais , Xenopus/metabolismo , Proteínas de Xenopus/metabolismo
4.
Development ; 146(4)2019 02 15.
Artigo em Inglês | MEDLINE | ID: mdl-30696711

RESUMO

Amphioxus, a cephalochordate, is an ideal animal in which to address questions about the evolution of regenerative ability and the mechanisms behind the invertebrate to vertebrate transition in chordates. However, the cellular and molecular basis of tail regeneration in amphioxus remains largely ill-defined. We confirmed that the tail regeneration of amphioxus Branchiostoma japonicum is a vertebrate-like epimorphosis process. We performed transcriptome analysis of tail regenerates, which provided many clues for exploring the mechanism of tail regeneration. Importantly, we showed that BMP2/4 and its related signaling pathway components are essential for the process of tail regeneration, revealing an evolutionarily conserved genetic regulatory system involved in regeneration in many metazoans. We serendipitously discovered that bmp2/4 expression is immediately inducible by general wounds and that expression of bmp2/4 can be regarded as a biomarker of wounds in amphioxus. Collectively, our results provide a framework for understanding the evolution and diversity of cellular and molecular events of tail regeneration in vertebrates.


Assuntos
Proteína Morfogenética Óssea 2/metabolismo , Proteína Morfogenética Óssea 4/metabolismo , Anfioxos/fisiologia , Regeneração , Transdução de Sinais , Cauda/fisiologia , Animais , Apoptose , Evolução Biológica , Biomarcadores/metabolismo , Proliferação de Células , Evolução Molecular , Perfilação da Expressão Gênica , Regulação da Expressão Gênica , Filogenia , Análise de Sequência de RNA , Cicatrização
5.
Wound Repair Regen ; 30(6): 707-725, 2022 11.
Artigo em Inglês | MEDLINE | ID: mdl-36301622

RESUMO

Xenopus tropicalis tadpoles have the capacity for scarless regeneration of appendages including the limb and tail. Following injury, transcriptional programs must be activated and inactivated with high spatial and temporal resolution to result in a properly patterned appendage. Functional studies have established that histone-modifying enzymes that act to close chromatin are required for regeneration, but the genomic regions sensitive to these activities are not fully established. Here we show that early inhibition of HDAC or EZH2 activity results in incomplete tail regeneration. To identify how each of these perturbations impacts chromatin accessibility, we applied an assay for transposase-accessible chromatin (ATAC-seq) to HDAC or EZH2-inhibited regenerating tadpoles. We find that neither perturbation results in a global increase in chromatin accessibility, but that both inhibitors have targeted effects on chromatin accessibility and gene expression. Upon HDAC inhibition, regulatory regions neighbouring genes associated with neuronal regeneration are preferentially accessible, whereas regions associated with immune response and apoptosis are preferentially accessible following EZH2 inhibition. Together, these results suggest distinct roles for these two chromatin-closing activities in appendage regeneration.


Assuntos
Cromatina , Cicatrização , Animais , Regeneração/fisiologia , Extremidades , Larva/fisiologia
6.
Dev Dyn ; 250(6): 852-865, 2021 06.
Artigo em Inglês | MEDLINE | ID: mdl-33410213

RESUMO

BACKGROUND: Histone deacetylases (HDACs) regulate transcriptional responses to injury stimuli that are critical for successful tissue regeneration. Previously we showed that HDAC inhibitor romidepsin potently inhibits axolotl tail regeneration when applied for only 1-minute postamputation (MPA). RESULTS: Here we tested CoCl2, a chemical that induces hypoxia and cellular stress, for potential to reverse romidepsin inhibition of tail regeneration. Partial rescue of regeneration was observed among embryos co-treated with romidepsin and CoCl2 for 1 MPA, however, extending the CoCl2 dosage window either inhibited regeneration (CoCl2 :0 to 30 MPA) or was lethal (CoCl2 :0 to 24 hours postamputation; HPA). CoCl2 :0 to 30 MPA caused tissue damage, tissue loss, and cell death at the distal tail tip, while CoCl2 treatment of non-amputated embryos or CoCl2 :60 to 90 MPA treatment after re-epithelialization did not inhibit tail regeneration. CoCl2 -romidepsin:1 MPA treatment partially restored expression of transcription factors that are typical of appendage regeneration, while CoCl2 :0 to 30 MPA significantly increased expression of genes associated with cell stress and inflammation. Additional experiments showed that CoCl2 :0 to 1 MPA and CoCl2 :0 to 30 MPA significantly increased levels of glutathione and reactive oxygen species, respectively. CONCLUSION: Our study identifies a temporal window from tail amputation to re-epithelialization, within which injury activated cells are highly sensitive to CoCl2 perturbation of redox homeostasis.


Assuntos
Ambystoma mexicanum/fisiologia , Cobalto/farmacologia , Regeneração/efeitos dos fármacos , Cauda/fisiologia , Amputação Cirúrgica , Animais , Morte Celular/efeitos dos fármacos , Depsipeptídeos/farmacologia , Inibidores de Histona Desacetilases/farmacologia , Cauda/efeitos dos fármacos , Fatores de Tempo
7.
Dev Dyn ; 250(6): 880-895, 2021 06.
Artigo em Inglês | MEDLINE | ID: mdl-32885536

RESUMO

BACKGROUND: Regeneration of complex patterned structures is well described among, although limited to a small sampling of, amphibians. This limitation impedes our understanding of the full range of regenerative competencies within this class of vertebrates, according to phylogeny, developmental life stage, and age. To broaden the phylogenetic breath of this research, we characterized the regenerative capacity of the Texas blind salamander (Eurycea rathbuni), a protected salamander native to the Edwards Aquifer of San Marcos, Texas and colonized by the San Marcos Aquatic Resource Center. As field observations suggested regenerative abilities in this population, the forelimb stump of a live captured female was amputated in the hopes of restoring the structure, and thus locomotion in the animal. Tails were clipped from two males to additionally document tail regeneration. RESULTS: We show that the Texas blind salamander exhibits robust limb and tail regeneration, like all other studied Plethodontidae. Regeneration in this species is associated with wound epithelium formation, blastema formation, and subsequent patterning and differentiation of the regenerate. CONCLUSIONS: The study has shown that the Texas blind salamander is a valuable model to study regenerative processes, and that therapeutic surgeries offer a valuable means to help maintain and conserve this vulnerable species.


Assuntos
Membro Anterior/fisiologia , Regeneração/fisiologia , Cauda/fisiologia , Urodelos/fisiologia , Animais , Diferenciação Celular/fisiologia , Feminino , Masculino , Filogenia , Urodelos/crescimento & desenvolvimento
8.
Dev Dyn ; 250(9): 1381-1392, 2021 09.
Artigo em Inglês | MEDLINE | ID: mdl-33137227

RESUMO

BACKGROUND: Xenopus embryos and tadpoles are versatile models for embryological, cell biological, and regenerative studies. Genomic and transcriptomic approaches have been increasingly employed in these frogs. Most of these genome-wide analyses have profiled tissues in bulk, but there are many scenarios where isolation of single cells may be advantageous, including isolation of a preferred cell type, or generation of a single-cell suspension for applications such as scRNA-Seq. RESULTS: Here we present a protocol for the disaggregation of complex tail and limb bud tissue, and use cell type-specific fluorescence in transgenic X. tropicalis appendages to isolate specific cell populations using fluorescence activated cell sorting (FACS). Our protocol addresses a specific challenge in Xenopus embryos and tadpoles: the storage of maternal yolk platelets in each cell, which can introduce light scatter and thereby false positives into FACS analysis. CONCLUSIONS: Here we gate against both nontransgenic and ubiquitously transgenic animals to reduce both false positives and false negatives. We use the Xtr.Tg(pax6:GFP;cryga:RFP;actc1:RFP)Papal transgenic line as a test case to demonstrate that nucleic acid preparations made from sorted cells are high quality and specific. We anticipate this method will be adaptable to study various cell types that have transgenic reporter lines to better profile cell types of interest.


Assuntos
Extremidades , Estudo de Associação Genômica Ampla , Animais , Animais Geneticamente Modificados , Citometria de Fluxo/métodos , Xenopus laevis/genética
9.
Biochem Biophys Res Commun ; 565: 91-96, 2021 08 06.
Artigo em Inglês | MEDLINE | ID: mdl-34102475

RESUMO

Amphibians such as Xenopus tropicalis exhibit a remarkable capacity for tissue regeneration after traumatic injury. Although transforming growth factor-ß (TGF-ß) receptor signaling is known to be essential for tissue regeneration in fish and amphibians, the role of TGF-ß ligands in this process is not well understood. Here, we show that inhibition of TGF-ß1 function prevents tail regeneration in Xenopus tropicalis tadpoles. We found that expression of tgfb1 is present before tail amputation and is sustained throughout the regeneration process. CRISPR-mediated knock-out (KO) of tgfb1 retards tail regeneration; the phenotype of tgfb1 KO tadpoles can be rescued by injection of tgfb1 mRNA. Cell proliferation, a critical event for the success of tissue regeneration, is downregulated in tgfb1 KO tadpoles. In addition, tgfb1 KO reduces the expression of phosphorylated Smad2/3 (pSmad2/3) which is important for TGF-ß signal-mediated cell proliferation. Collectively, our results show that TGF-ß1 regulates cell proliferation through the activation of Smad2/3. We therefore propose that TGF-ß1 plays a critical role in TGF-ß receptor-dependent tadpole tail regeneration in Xenopus.


Assuntos
Larva/metabolismo , Fator de Crescimento Transformador beta1/metabolismo , Animais , Proliferação de Células , Transdução de Sinais , Proteína Smad2/metabolismo , Proteína Smad3/metabolismo , Xenopus , Proteínas de Xenopus/metabolismo
10.
J Exp Zool B Mol Dev Evol ; 336(2): 145-164, 2021 03.
Artigo em Inglês | MEDLINE | ID: mdl-31532061

RESUMO

The present review hypothesizes that during the transition from water to land, amniotes lost part of the genetic program for metamorphosis utilized in larvae of their amphibian ancestors, a program that in extant fish and amphibians allows organ regeneration. The direct development of amniotes, with their growth from embryos to adults, occurred with the elimination of larval stages, increases the efficiency of immune responses and the complexity of nervous circuits. In amniotes, T-cells and macrophages likely eliminate embryonic-larval antigens that are replaced with the definitive antigens of adult organs. Among lepidosaurians numerous lizard families during the Permian and Triassic evolved the process of tail autotomy to escape predation, followed by tail regeneration. Autotomy limits inflammation allowing the formation of a regenerative blastema rich in the immunosuppressant and hygroscopic hyaluronic acid. Expression loss of developmental genes for metamorphosis and segmentation in addition to an effective immune system, determined an imperfect regeneration of the tail. Genes involved in somitogenesis were likely lost or are inactivated and the axial skeleton and muscles of the original tail are replaced with a nonsegmented cartilaginous tube and segmental myotomes. Lack of neural genes, negative influence of immune system, and isolation of the regenerating spinal cord within the cartilaginous tube impede the production of nerve and glial cells, and a stratified spinal cord with ganglia. Tissue and organ regeneration in other body regions of lizards and other reptiles is relatively limited, like in the other amniotes, although the cartilage shows a higher regenerative capability than in mammals.


Assuntos
Evolução Biológica , Lagartos/fisiologia , Regeneração/fisiologia , Cauda/fisiologia , Animais , Lagartos/genética , Regeneração/genética
11.
J Evol Biol ; 34(4): 671-679, 2021 04.
Artigo em Inglês | MEDLINE | ID: mdl-33539579

RESUMO

Tissue regeneration is a fundamental evolutionary adaptation, which is well known in lizards that can regenerate their entire tail. However, numerous parameters of this process remain poorly understood. Lizard tail serves many functions. Thus, tail autotomy comes with many disadvantages and the need for quick regeneration is imperative. To provide the required energy and materials for caudal tissue building, lizards are expected to undergo a number of physiological and biochemical adjustments. Previous research showed that tail regeneration induces changes in the digestive process. Here, we investigated if and how tail regeneration affects the digestive performance in five wall lizard species deriving from mainland and island sites and questioned whether the association of tail regeneration and digestion is affected by species relationships or environmental features, including predation pressure. We expected that lizards from high predation environments would regenerate their tail faster and modify accordingly their digestive efficiency, prioritizing the digestion of proteins; the main building blocks for tissue repair. Second, we anticipated that the general food shortage on islands would inhibit the process. Our findings showed that all species shifted their digestive efficiency, as predicted. Elongation rate was higher in sites with stronger predation regime and this was also applied to the rate with which protein digestion raised. Gut passage time increases during regeneration so as to improve the nutrient absorbance, but among the islanders, the pace was more intense. The deviations between species should be attributed to the different ecological conditions prevailing on islands rather than to their phylogenetic relationships.


Assuntos
Digestão , Lagartos/fisiologia , Cauda/crescimento & desenvolvimento , Animais , Ecossistema , Grécia , Masculino , Filogenia , Cauda/metabolismo
12.
Cell Mol Life Sci ; 77(6): 1021-1030, 2020 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-31559446

RESUMO

The tail of all vertebrates, regardless of size and anatomical detail, derive from a post-anal extension of the embryo known as the tail bud. Formation, growth and differentiation of this structure are closely associated with the activity of a group of cells that derive from the axial progenitors that build the spinal cord and the muscle-skeletal case of the trunk. Gdf11 activity switches the development of these progenitors from a trunk to a tail bud mode by changing the regulatory network that controls their growth and differentiation potential. Recent work in the mouse indicates that the tail bud regulatory network relies on the interconnected activities of the Lin28/let-7 axis and the Hox13 genes. As this network is likely to be conserved in other mammals, it is possible that the final length and anatomical composition of the adult tail result from the balance between the progenitor-promoting and -repressing activities provided by those genes. This balance might also determine the functional characteristics of the adult tail. Particularly relevant is its regeneration potential, intimately linked to the spinal cord. In mammals, known for their complete inability to regenerate the tail, the spinal cord is removed from the embryonic tail at late stages of development through a Hox13-dependent mechanism. In contrast, the tail of salamanders and lizards keep a functional spinal cord that actively guides the tail's regeneration process. I will argue that the distinct molecular networks controlling tail bud development provided a collection of readily accessible gene networks that were co-opted and combined during evolution either to end the active life of those progenitors or to make them generate the wide diversity of tail shapes and sizes observed among vertebrates.


Assuntos
Evolução Biológica , Regeneração , Cauda/embriologia , Cauda/fisiologia , Animais , Evolução Molecular , Regulação da Expressão Gênica no Desenvolvimento , Redes Reguladoras de Genes , Humanos , Cauda/metabolismo , Vertebrados
13.
Biochem Biophys Res Commun ; 522(4): 990-995, 2020 02 19.
Artigo em Inglês | MEDLINE | ID: mdl-31812242

RESUMO

Xenopus tropicalis tadpoles can regenerate an amputated tail, including spinal cord, muscle and notochord, through cell proliferation and differentiation. However, the molecular mechanisms that regulate cell proliferation during tail regeneration are largely unknown. Here we show that JunB plays an important role in tail regeneration by regulating cell proliferation. The expression of junb is rapidly activated and sustained during tail regeneration. Knockout (KO) of junb causes a delay in tail regeneration and tissue differentiation. In junb KO tadpoles, cell proliferation is prevented before tissue differentiation. Furthermore, TGF-ß signaling, which is activated just after tail amputation, regulates the induction and maintenance of junb expression. These findings demonstrate that JunB, a downstream component of TGF-ß signaling, works as a positive regulator of cell proliferation during Xenopus tail regeneration.


Assuntos
Regeneração/fisiologia , Cauda/fisiologia , Fator de Transcrição AP-1/metabolismo , Xenopus/fisiologia , Animais , Proliferação de Células , Regulação para Baixo/genética , Regulação da Expressão Gênica no Desenvolvimento , Técnicas de Inativação de Genes , Larva/fisiologia , Transdução de Sinais , Fator de Crescimento Transformador beta/metabolismo
14.
J Exp Zool B Mol Dev Evol ; 334(1): 59-71, 2020 01.
Artigo em Inglês | MEDLINE | ID: mdl-31631512

RESUMO

Regenerating epidermis and spinal cord is essential to maintain tail regeneration in lizards. The effects of vitamin A, an inhibitor of epithelial cornification, have been studied in lizards during tail regeneration. The injection of high doses of vitamin A induces regeneration of a thinner tail with gummy consistency and suppression of the formation of a normal cartilaginous axial skeleton. Microscopic analysis reveals that all epithelia increase the secretion of glycoprotein-mucus. During the analyzed period the epidermis does not form scales and keratinocytes limit or stop the production of bundles of intermediate filament keratins and packets of corneous beta-proteins (ß-keratins). Differentiation of oberhautchen and ß-layers is much reduced or inhibited while α-keratinization and the formation of a corneous layer are affected as well. The effects of vitamin A are dramatic also on mesoderm cells since the treatment stimulates an invasion of blood cells likely due to the disruption of the wall of blood vessels, mesenchymal cell death (pycnosis), and diffuse phagocytosis by immune cells. A delay of cartilage differentiation and cartilage degradation due to an increase of lysosomes in these cells or released by white blood cells explains the lack of stiffness of the regenerating tail after vitamin A treatment. Regenerating muscles are variably affected, ranging from a variable necrotic effect with partial degradation of internal organelles and myofilaments to a massive or complete loss of myofibrils that do not organize in sarcomeres. In general hypervitaminosis A appears to delay epithelial but also mesodermal cell differentiation and maintains the regenerating tail in an immature condition.


Assuntos
Epitélio/efeitos dos fármacos , Lagartos/fisiologia , Muco/metabolismo , Regeneração/efeitos dos fármacos , Cauda/fisiologia , Vitamina A/farmacologia , Animais , Cartilagem/crescimento & desenvolvimento , Diferenciação Celular , Células Epidérmicas , Epiderme , Epitélio/fisiologia , Músculo Esquelético/crescimento & desenvolvimento , Vitamina A/administração & dosagem
15.
Dev Growth Differ ; 61(9): 447-456, 2019 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-31713234

RESUMO

Wound epidermis (WE) and the apical epithelial cap (AEC) are believed to trigger regeneration of amputated appendages such as limb and tail in amphibians by producing certain secreted signaling molecules. To date, however, only limited information about the molecular signatures of these epidermal structures is available. Here we used a transgenic Xenopus laevis line harboring the enhanced green fluorescent protein (egfp) gene under control of an es1 gene regulatory sequence to isolate WE/AEC cells by performing fluorescence-activated cell sorting during the time course of tail regeneration (day 1, day 2, day 3 and day 4 after amputation). Time-course transcriptome analysis of these isolated WE/AEC cells revealed that more than 8,000 genes, including genes involved in signaling pathways such as those of reactive oxygen species, fibroblast growth factor (FGF), canonical and non-canonical Wnt, transforming growth factor ß (TGF ß) and Notch, displayed dynamic changes of their expression during tail regeneration. Notably, this approach enabled us to newly identify seven secreted signaling molecule genes (mdk, fstl, slit1, tgfß1, bmp7.1, angptl2 and egfl6) that are highly expressed in tail AEC cells. Among these genes, five (mdk, fstl, slit1, tgfß1 and bmp7.1) were also highly expressed in limb AEC cells but the other two (angptl2 and egfl6) are specifically expressed in tail AEC cells. Interestingly, there was no expression of fgf8 in tail WE/AEC cells, whose expression and pivotal role in limb AEC cells have been reported previously. Thus, we identified common and different properties between tail and limb AEC cells.


Assuntos
Proteínas de Fluorescência Verde/genética , Transdução de Sinais/genética , Proteínas de Xenopus/genética , Animais , Epitélio/química , Citometria de Fluxo , Perfilação da Expressão Gênica , Análise de Sequência de RNA , Xenopus laevis
16.
Proteomics ; 17(1-2)2017 01.
Artigo em Inglês | MEDLINE | ID: mdl-27896924

RESUMO

Salamander axolotl has been emerging as an important model for stem cell research due to its powerful regenerative capacity. Several advantages, such as the high capability of advanced tissue, organ, and appendages regeneration, promote axolotl as an ideal model system to extend our current understanding on the mechanisms of regeneration. Acknowledging the common molecular pathways between amphibians and mammals, there is a great potential to translate the messages from axolotl research to mammalian studies. However, the utilization of axolotl is hindered due to the lack of reference databases of genomic, transcriptomic, and proteomic data. Here, we introduce the proteome analysis of the axolotl tail section searched against an mRNA-seq database. We translated axolotl mRNA sequences to protein sequences and annotated these to process the LC-MS/MS data and identified 1001 nonredundant proteins. Functional classification of identified proteins was performed by gene ontology searches. The presence of some of the identified proteins was validated by in situ antibody labeling. Furthermore, we have analyzed the proteome expressional changes postamputation at three time points to evaluate the underlying mechanisms of the regeneration process. Taken together, this work expands the proteomics data of axolotl to contribute to its establishment as a fully utilized model.


Assuntos
Ambystoma mexicanum/metabolismo , RNA Mensageiro/metabolismo , Animais , Cromatografia Líquida , Bases de Dados Genéticas , Proteômica , Espectrometria de Massas em Tandem
17.
Dev Biol ; 410(1): 45-55, 2016 Feb 01.
Artigo em Inglês | MEDLINE | ID: mdl-26703427

RESUMO

Urodele amphibians have remarkable organ regeneration ability. They can regenerate not only limbs but also a tail throughout their life. It has been demonstrated that the regeneration of some organs are governed by the presence of neural tissues. For instance, limb regeneration cannot be induced without nerves. Thus, identifying the nerve factors has been the primary focus in amphibian organ regeneration research. Recently, substitute molecules for nerves in limb regeneration, Bmp and Fgfs, were identified. Cooperative inputs of Bmp and Fgfs can induce limb regeneration in the absence of nerves. In the present study, we investigated whether similar or same regeneration mechanisms control another neural tissue governed organ regeneration, i.e., tail regeneration, in Ambystoma mexicanum. Neural tissues in a tail, which is the spinal cord, could transform wound healing responses into organ regeneration responses, similar to nerves in limb regeneration. Furthermore, the identified regeneration inducer Fgf2+Fgf8+Bmp7 showed similar inductive effects. However, further analysis revealed that the blastema cells induced by Fgf2+Fgf8+Bmp7 could participate in the regeneration of several tissues, but could not organize a patterned tail. Regeneration inductive ability of Fgf2+Fgf8+Bmp7 was confirmed in another urodele, Pleurodeles waltl. These results suggest that the organ regeneration ability in urodele amphibians is controlled by a common mechanism.


Assuntos
Proteínas Morfogenéticas Ósseas/fisiologia , Fatores de Crescimento de Fibroblastos/fisiologia , Regeneração/fisiologia , Transdução de Sinais/fisiologia , Cauda/fisiologia , Urodelos/fisiologia , Animais , Linhagem da Célula , Medula Espinal/fisiologia , Cicatrização
18.
Naturwissenschaften ; 104(3-4): 22, 2017 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-28271175

RESUMO

In caudal autotomy, lizards shed their tail to escape from an attacking predator. Since the tail serves multiple functions, caudal regeneration is of pivotal importance. However, it is a demanding procedure that requires substantial energy and nutrients. Therefore, lizards have to increase energy income to fuel the extraordinary requirements of the regenerating tail. We presumed that autotomized lizards would adjust their digestion to acquire this additional energy. To clarify the effects of tail regeneration on digestion, we compared the digestive performance before autotomy, during regeneration, and after its completion. Tail regeneration indeed increased gut passage time but did not affect digestive performance in a uniform pattern: though protein income was maximized, lipid and sugar acquisition remained stable. This divergence in proteins may be attributed to their particular role in tail reconstruction, as they are the main building blocks for tissue formation.


Assuntos
Digestão/fisiologia , Lagartos/fisiologia , Regeneração , Cauda/fisiologia , Animais , Metabolismo Energético , Masculino
19.
BMC Genomics ; 17: 718, 2016 09 07.
Artigo em Inglês | MEDLINE | ID: mdl-27605362

RESUMO

BACKGROUND: The ability of regeneration is essential for the homeostasis of all animals as it allows the repair and renewal of tissues and body parts upon normal turnover or injury. The extent of this ability varies greatly in different animals with the sea anemone Nematostella vectensis, a basal cnidarian model animal, displaying remarkable whole-body regeneration competence. RESULTS: In order to study this process in Nematostella we performed an RNA-Seq screen wherein we analyzed and compared the transcriptional response to bisection in the wound-proximal body parts undergoing oral (head) or aboral (tail) regeneration at several time points up to the initial restoration of the basic body shape. The transcriptional profiles of regeneration responsive genes were analyzed so as to define the temporal pattern of differential gene expression associated with the tissue-specific oral and aboral regeneration. The identified genes were characterized according to their GO (gene ontology) assignations revealing groups that were enriched in the regeneration process with particular attention to their affiliation to the major developmental signaling pathways. While some of the genes and gene groups thus analyzed were previously known to be active in regeneration, we have also revealed novel and surprising candidate genes such as cilia-associated genes that likely participate in this important developmental program. CONCLUSIONS: This work highlighted the main groups of genes which showed polarization upon regeneration, notably the proteinases, multiple transcription factors and the Wnt pathway genes that were highly represented, all displaying an intricate temporal balance between the two sides. In addition, the evolutionary comparison performed between regeneration in different animal model systems may reveal the basic mechanisms playing a role in this fascinating process.


Assuntos
Perfilação da Expressão Gênica/métodos , Redes Reguladoras de Genes , Regeneração , Anêmonas-do-Mar/fisiologia , Análise de Sequência de RNA/métodos , Animais , Regulação da Expressão Gênica no Desenvolvimento , Ontologia Genética , Cabeça/fisiologia , Especificidade de Órgãos , Anêmonas-do-Mar/genética , Transdução de Sinais , Cauda/fisiologia
20.
Bioessays ; 36(1): 27-33, 2014 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-24264888

RESUMO

We recently examined gene expression during Xenopus tadpole tail appendage regeneration and found that carbohydrate regulatory genes were dramatically altered during the regeneration process. In this essay, we speculate that these changes in gene expression play an essential role during regeneration by stimulating the anabolic pathways required for the reconstruction of a new appendage. We hypothesize that during regeneration, cells use leptin, slc2a3, proinsulin, g6pd, hif1α expression, receptor tyrosine kinase (RTK) signaling, and the production of reactive oxygen species (ROS) to promote glucose entry into glycolysis and the pentose phosphate pathway (PPP), thus stimulating macromolecular biosynthesis. We suggest that this metabolic shift is integral to the appendage regeneration program and that the Xenopus model is a powerful experimental system to further explore this phenomenon. Also watch the Video Abstract.


Assuntos
Metabolismo dos Carboidratos/fisiologia , Via de Pentose Fosfato/fisiologia , Regeneração/fisiologia , Vertebrados/fisiologia , Animais , Metabolismo dos Carboidratos/genética , Expressão Gênica/genética , Glucose/metabolismo , Glicólise/genética , Glicólise/fisiologia , Via de Pentose Fosfato/genética , Espécies Reativas de Oxigênio/metabolismo , Regeneração/genética , Transdução de Sinais/genética , Transdução de Sinais/fisiologia , Vertebrados/genética , Vertebrados/metabolismo , Xenopus/genética , Xenopus/metabolismo , Xenopus/fisiologia
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