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1.
Nature ; 563(7730): 235-240, 2018 11.
Artigo em Inglês | MEDLINE | ID: mdl-30356213

RESUMO

Biosynthesis of glycogen, the essential glucose (and hence energy) storage molecule in humans, animals and fungi1, is initiated by the glycosyltransferase enzyme, glycogenin (GYG). Deficiencies in glycogen formation cause neurodegenerative and metabolic disease2-4, and mouse knockout5 and inherited human mutations6 of GYG impair glycogen synthesis. GYG acts as a 'seed core' for the formation of the glycogen particle by catalysing its own stepwise autoglucosylation to form a covalently bound gluco-oligosaccharide chain at initiation site Tyr 195. Precise mechanistic studies have so far been prevented by an inability to access homogeneous glycoforms of this protein, which unusually acts as both catalyst and substrate. Here we show that unprecedented direct access to different, homogeneously glucosylated states of GYG can be accomplished through a palladium-mediated enzyme activation 'shunt' process using on-protein C-C bond formation. Careful mimicry of GYG intermediates recapitulates catalytic activity at distinct stages, which in turn allows discovery of triphasic kinetics and substrate plasticity in GYG's use of sugar substrates. This reveals a tolerant but 'proof-read' mechanism that underlies the precision of this metabolic process. The present demonstration of direct, chemically controlled access to intermediate states of active enzymes suggests that such ligation-dependent activation could be a powerful tool in the study of mechanism.


Assuntos
Glucose/biossíntese , Paládio/metabolismo , Biocatálise , Ativação Enzimática , Galactose/metabolismo , Glucosiltransferases/metabolismo , Glicoproteínas/metabolismo , Glicosilação , Humanos , Cinética , Difosfato de Uridina/metabolismo
2.
Angew Chem Int Ed Engl ; 62(50): e202313968, 2023 12 11.
Artigo em Inglês | MEDLINE | ID: mdl-37884479

RESUMO

Macrophage phagocytosis of tumor cells has emerged as an attractive strategy for tumor therapy. Nevertheless, immunosuppressive M2 macrophages in the tumor microenvironment and the high expression of anti-phagocytic signals from tumor cells impede therapeutic efficacy. To address these issues and improve the management of malignant tumors, in this study we developed a gene-editable palladium-based bioorthogonal nanoplatform, consisting of CRISPR/Cas9 gene editing system-linked Pd nanoclusters, and a hyaluronic acid surface layer (HBPdC). This HBPdC nanoplatform exhibited satisfactory tumor-targeting efficiency and triggered Fenton-like reactions in the tumor microenvironment to generate reactive oxygen species for chemodynamic therapy and macrophage M1 polarization, which directly eliminated tumor cells, and stimulated the antitumor response of macrophages. HBPdC could reprogram tumor cells through gene editing to reduce the expression of CD47 and adipocyte plasma membrane-associated protein, thereby promoting their recognition and phagocytosis by macrophages. Moreover, HBPdC induced the activation of sequestered prodrugs via bioorthogonal catalysis, enabling chemotherapy and thereby enhancing tumor cell death. Importantly, the Pd nanoclusters of HBPdC were sufficiently cleared through basic metabolic pathways, confirming their biocompatibility and biosafety. Therefore, by promoting macrophage phagocytosis, the HBPdC system developed herein represents a highly promising antitumor toolset for cancer therapy applications.


Assuntos
Neoplasias , Paládio , Humanos , Paládio/farmacologia , Paládio/metabolismo , Linhagem Celular Tumoral , Macrófagos/metabolismo , Fagocitose , Neoplasias/tratamento farmacológico , Neoplasias/metabolismo , Microambiente Tumoral/genética
3.
Appl Environ Microbiol ; 88(12): e0058022, 2022 06 28.
Artigo em Inglês | MEDLINE | ID: mdl-35638843

RESUMO

The growth of sulfate-reducing bacteria (SRB) and associated hydrogen sulfide production can be problematic in a range of industries such that inhibition strategies are needed. A range of SRB can reduce metal ions, a strategy that has been utilized for bioremediation, metal recovery, and synthesis of precious metal catalysts. In some instances, the metal remains bound to the cell surface, and the impact of this coating on bacterial cell division and metabolism has not previously been reported. In this study, Desulfovibrio desulfuricans cells (1g dry weight) enabled the reduction of up to 1500 mmol (157.5 g) palladium (Pd) ions, resulting in cells being coated in approximately 1 µm of metal. Thickly coated cells were no longer able to metabolize or divide, ultimately leading to the death of the population. Increasing Pd coating led to prolonged inhibition of sulfate reduction, which ceased completely after cells had been coated with 1200 mmol Pd g-1 dry cells. Less Pd nanoparticle coating permitted cells to carry out sulfate reduction and divide, allowing the population to recover over time as surface-associated Pd diminished. Overcoming inhibition in this way was more rapid using lactate as the electron donor, compared to formate. When using formate as an electron donor, preferential Pd(II) reduction took place in the presence of 100 mM sulfate. The inhibition of important metabolic pathways using a biologically enabled casing in metal highlights a new mechanism for the development of microbial control strategies. IMPORTANCE Microbial reduction of sulfate to hydrogen sulfide is highly undesirable in several industrial settings. Some sulfate-reducing bacteria are also able to transform metal ions in their environment into metal phases that remain attached to their outer cell surface. This study demonstrates the remarkable extent to which Desulfovibrio desulfuricans can be coated with locally generated metal nanoparticles, with individual cells carrying more than 100 times their mass of palladium metal. Moreover, it reveals the effect of metal coating on metabolism and replication for a wide range of metal loadings, with bacteria unable to reduce sulfate to sulfide beyond a specific threshold. These findings present a foundation for a novel means of modulating the activity of sulfate-reducing bacteria.


Assuntos
Desulfovibrio desulfuricans , Desulfovibrio , Sulfeto de Hidrogênio , Bactérias/metabolismo , Divisão Celular , Desulfovibrio/metabolismo , Desulfovibrio desulfuricans/metabolismo , Formiatos/metabolismo , Sulfeto de Hidrogênio/metabolismo , Oxirredução , Paládio/metabolismo , Sulfatos/metabolismo , Sulfetos/metabolismo
4.
Environ Sci Technol ; 56(24): 18030-18040, 2022 12 20.
Artigo em Inglês | MEDLINE | ID: mdl-36383359

RESUMO

More food production required to feed humans will require intensive use of herbicides to protect against weeds. The widespread application and persistence of herbicides pose environmental risks for nontarget species. Elemental-palladium nanoparticles (Pd0NPs) are known to catalyze reductive dehalogenation of halogenated organic pollutants. In this study, the reductive conversion of 2,4-dichlorophenoxyacetic acid (2,4-D) was evaluated in a H2-based membrane catalyst-film reactor (H2-MCfR), in which Pd0NPs were in situ-synthesized as the catalyst film and used to activate H2 on the surface of H2-delivery membranes. Batch kinetic experiments showed that 99% of 2,4-D was removed and converted to phenoxyacetic acid (POA) within 90 min with a Pd0 surface loading of 20 mg Pd/m2, achieving a catalyst specific activity of 6.6 ± 0.5 L/g-Pd-min. Continuous operation of the H2-MCfR loaded with 20 mg Pd/m2 sustained >99% removal of 50 µM 2,4-D for 20 days. A higher Pd0 surface loading, 1030 mg Pd/m2, also enabled hydrosaturation and hydrolysis of POA to cyclohexanone and glycolic acid. Density functional theory identified the reaction mechanisms and pathways, which involved reductive hydrodechlorination, hydrosaturation, and hydrolysis. Molecular electrostatic potential calculations and Fukui indices suggested that reductive dehalogenation could increase the bioavailability of herbicides. Furthermore, three other halogenated herbicides─atrazine, dicamba, and bromoxynil─were reductively dehalogenated in the H2-MCfR. This study documents a promising method for the removal and detoxification of halogenated herbicides in aqueous environments.


Assuntos
Herbicidas , Nanopartículas Metálicas , Humanos , Paládio/metabolismo , Catálise , Ácido 2,4-Diclorofenoxiacético
5.
Ecotoxicol Environ Saf ; 246: 114148, 2022 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-36194938

RESUMO

Efficient treatment of cyanobacterial blooms in eutrophication waters by safe and reliable nanomaterials is a big challenge for reducing environmental health risks. Herein, a novel strategy combining palladium clusters (Pdn) with g-C3N4 nanocomposite was presented to achieve high-efficient removal of Microcystis aeruginosa cells through coagulation and breakage. Interestingly, 95.17% of algal cells (initial concentration of 5.6 × 106 cells mL-1) were promptly removed in the Pd/g-C3N4 (5%) system within only 10 min and without visible light irradiation and persulfate activation. Both the release of potassium ion and microcystin during the removal process and the transmission electron microscope observations of Microcystis aeruginosa cells proved that the integrity of the algal cell membrane was destroyed. The removal of Microcystin-LR (MC-LR) were further confirmed in the next process. Pd metal interaction and breakage against algal cells may cause disruption of algal cells. This study describes a novel technology for the superfast removal of harmful algae and may provide a new insight into the control of cyanobacterial blooms in practical applications.


Assuntos
Microcystis , Nanoestruturas , Microcystis/metabolismo , Paládio/metabolismo , Microcistinas/metabolismo , Eutrofização , Luz
6.
Org Biomol Chem ; 19(12): 2773-2783, 2021 03 28.
Artigo em Inglês | MEDLINE | ID: mdl-33690764

RESUMO

Different Pd-complexes containing orthometallated push-pull oxazolones were inserted by supramolecular Pd-amino acid coordination on two genetically engineered modified variants of the thermoalkalophilic Geobacillus thermocatenolatus lipase (GTL). Pd-lipase conjugation was performed on the solid phase in the previously immobilized form of GTL under mild conditions, and soluble conjugated Pd-GTL complexes were obtained by simply desorbing by washing with an acetonitrile aqueous solution. Three different Pd complexes were incorporated into two different genetically modified enzyme variants, one containing all the natural cysteine residues changed to serine residues, and another variant including an additional Cys mutation directly in the catalytic serine (Ser114Cys). The new Pd-enzyme conjugates were fluorescent even at ppm concentrations, while under the same conditions free Pd complexes did not show fluorescence at all. The Pd conjugation with the enzyme extremely increases the catalytic profile of the corresponding Pd complex from 200 to almost 1000-fold in the hydrogenation of arenes in aqueous media, achieving in the case of GTL conjugated with orthopalladated 4a an outstanding TOF value of 27 428 min-1. Also the applicability of GTL-C114 conjugated with orthopalladated 4b in a site-selective C-H activation reaction under mild conditions has been demonstrated. Therefore, the Pd incorporation into the enzyme produces a highly stable conjugate, and improves remarkably the catalytic activity and selectivity, as well as the fluorescence intensity, of the Pd complexes.


Assuntos
Complexos de Coordenação/química , Fluorescência , Lipase/química , Oxazolona/química , Paládio/química , Engenharia de Proteínas , Adsorção , Catálise , Complexos de Coordenação/síntese química , Complexos de Coordenação/metabolismo , Geobacillus/enzimologia , Lipase/genética , Lipase/metabolismo , Modelos Moleculares , Estrutura Molecular , Oxazolona/metabolismo , Paládio/metabolismo
7.
J Nat Prod ; 84(8): 2374-2379, 2021 08 27.
Artigo em Inglês | MEDLINE | ID: mdl-34445873

RESUMO

The first systematic direct diversification of a complex natural product by metal-catalyzed N-H functionalization was carried out. A new series of N-(hetero)aryl analogues (1-32) of the natural anti-Alzheimer's disease drug huperzine A (HPA) was prepared via palladium-catalyzed Buchwald-Hartwig cross-coupling reactions of HPA with various aryl bromides in good yields. Most of the N-aryl-huperzine A (N-aryl-HPA) analogues showed good acetylcholinesterase (AChE) inhibitory activity in in vitro experiments. Three arylated huperzine A analogues (14, 19, and 30) exhibited stronger anti-AChE activity than HPA. The 5-methoxy-2-pyridyl analogue (30) displayed the most potent AChE inhibition activity, with an IC50 value of 1.5 µM, which was 7.6-fold more active than HPA. Compound 30 also exhibited better neuroprotective activity for H2O2-induced damage in SH-SY5Y cells than HPA. Structure-activity relationship analysis suggested that the electron density of the installed aromatic ring or heteroaromatic ring played a significant role in inducing the AChE inhibition activity. Overall, compound 30 showed the advantages of easy synthesis, high potency and selectivity, and improved neuroprotection, making it a potential huperzine-type lead compound for Alzheimer's disease drug development.


Assuntos
Alcaloides/farmacologia , Doença de Alzheimer/tratamento farmacológico , Inibidores da Colinesterase/farmacologia , Fármacos Neuroprotetores/farmacologia , Paládio/metabolismo , Sesquiterpenos/farmacologia , Alcaloides/síntese química , Barreira Hematoencefálica , Catálise , Linhagem Celular Tumoral , Inibidores da Colinesterase/síntese química , Humanos , Simulação de Acoplamento Molecular , Estrutura Molecular , Fármacos Neuroprotetores/síntese química , Sesquiterpenos/síntese química , Relação Estrutura-Atividade
8.
Angew Chem Int Ed Engl ; 60(23): 12971-12979, 2021 06 01.
Artigo em Inglês | MEDLINE | ID: mdl-33772996

RESUMO

Photothermal therapy (PTT) is an extremely promising tumor therapeutic modality. However, excessive heat inevitably injures normal tissues near tumors, and the damage to cancer cells caused by mild hyperthermia is easily repaired by stress-induced heat shock proteins (HSPs). Thus, maximizing the PTT efficiency and minimizing the damage to healthy tissues simultaneously by adopting appropriate therapeutic temperatures is imperative. Herein, an innovative strategy is reported: ferroptosis-boosted mild PTT based on a single-atom nanozyme (SAzyme). The Pd SAzyme with atom-economical utilization of catalytic centers exhibits peroxidase (POD) and glutathione oxidase (GSHOx) mimicking activities, and photothermal conversion performance, which can result in ferroptosis featuring the up-regulation of lipid peroxides (LPO) and reactive oxygen species (ROS). The accumulation of LPO and ROS provides a powerful approach for cleaving HSPs, which enables Pd SAzyme-mediated mild-temperature PTT.


Assuntos
Nanopartículas/química , Paládio/química , Terapia Fototérmica , Temperatura , Animais , Catálise , Linhagem Celular Tumoral , Sobrevivência Celular/efeitos dos fármacos , Relação Dose-Resposta a Droga , Ferroptose , Peróxidos Lipídicos/metabolismo , Camundongos , Oxirredutases/química , Oxirredutases/metabolismo , Paládio/metabolismo , Paládio/farmacologia , Tamanho da Partícula , Espécies Reativas de Oxigênio/metabolismo
9.
Angew Chem Int Ed Engl ; 60(11): 5759-5765, 2021 03 08.
Artigo em Inglês | MEDLINE | ID: mdl-33247502

RESUMO

Cell surface engineering with functional polymers is an effective strategy to modulate cell activity. Here, a bio-palladium catalyzed polymerization strategy was developed for in situ synthesis of conjugated polymers on living cell surfaces. Through Sonagashira polymerization, photoactive polyphenyleneethynylene (PPE) is synthesized on the cell surface via cell-generated bio-Pd catalyst. The in situ formed PPE is identified by excellent light-harvest capacity and blue fluorescence on the surfaces of E. coli and C. pyrenoidosa. Besides imaging microbes for tracing the polymerization process, PPE also exhibits enhanced antibacterial activity against E. coli. It can also augment the ATP synthesis of C. pyrenoidosa through enlarging the light absorption and accelerating the cyclic electron transport of the algae. With this bio-metal catalyzed polymerization method, functional polymers can be synthesized in situ on the living cell surface.


Assuntos
Alcinos/síntese química , Éteres/síntese química , Paládio/química , Polímeros/síntese química , Alcinos/química , Alcinos/metabolismo , Catálise , Escherichia coli/química , Escherichia coli/citologia , Escherichia coli/metabolismo , Éteres/química , Éteres/metabolismo , Eucariotos/química , Eucariotos/citologia , Eucariotos/metabolismo , Paládio/metabolismo , Processos Fotoquímicos , Polimerização , Polímeros/química , Polímeros/metabolismo , Propriedades de Superfície
10.
Appl Microbiol Biotechnol ; 104(9): 4059-4069, 2020 May.
Artigo em Inglês | MEDLINE | ID: mdl-32179949

RESUMO

Geobacter sulfurreducens is capable of reducing Pd(II) to Pd(0) using acetate as electron donor; however, the biochemical and genetic mechanisms involved in this process have not been described. In this work, we carried out transcriptome profiling analysis to identify the genes involved in Pd(II) reduction in this bacterium. Our results showed that 252 genes were upregulated while 141 were downregulated during Pd(II) reduction. Among the upregulated genes, 12 were related to energy metabolism and electron transport, 50 were classified as involved in protein synthesis, 42 were associated to regulatory functions and transcription, and 47 have no homologs with known function. RT-qPCR data confirmed upregulation of genes encoding PilA, the structural protein for electrically conductive pili, as well as c-type cytochromes GSU1062, GSU2513, GSU2808, GSU2934, GSU3107, OmcH, OmcM, PpcA, and PpcD under Pd(II)-reducing conditions. ΔpilA and ΔpilR mutant strains showed 20% and 40% decrease in the Pd(II)-reducing capacity, respectively, as compared to the wild type strain, indicating the central role of pili in this process. RT-qPCR data collected during Pd(II) reduction also confirmed downregulation of omcB, omcC, omcZ, and omcS genes, which have been shown to be involved in the reduction of Fe(III) and electrodes. The present study contributes to elucidate the mechanisms involved in Pd(II) reduction by G. sulfurreducens. Graphical Abstract KEY POINTS: • Transcriptome analysis provided evidence on Pd(II) reduction by G. sulfurreducens. • Results indicate that electrically conductive pili is involved in Pd(II) reduction. • G. sulfurreducens was not able to grow under Pd(II)-reducing conditions. • The study contributes to a better understanding of the mechanisms in Pd(II) reduction.


Assuntos
Citocromos/genética , Perfilação da Expressão Gênica , Geobacter/genética , Paládio/metabolismo , Citocromos/classificação , Regulação para Baixo , Transporte de Elétrons/genética , Metabolismo Energético/genética , Regulação Bacteriana da Expressão Gênica , Oxirredução , Regulação para Cima
11.
J Eur Acad Dermatol Venereol ; 34(1): 188-191, 2020 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-31494978

RESUMO

BACKGROUND: 'Braun' is an illegal injectable dihydrocodeinone-enriched drug mixture of semi-synthetic opioids. It is prepared by palladium-catalysed hydrogenation from codeine-containing tablets. OBJECTIVE: We aimed to characterize the dermatologic consequences of long-term abuse of 'Braun'. METHODS: Skin biopsies of two long-term 'Braun' abusers were evaluated histopathologically, immunohistochemically and ultrastructurally. Palladium skin content was assessed by X-ray fluorescence (XRF) spectrometry. RESULTS: Both patients showed generalized diffuse dark blue-grey hyperpigmentation of the skin. In both, an abnormal population of cells containing intracytoplasmic brownish granular material was identified in the papillary dermis by light microscopy. Electron microscopy revealed a dense and minimally structured material that predominantly accumulated in macrophages, fibroblasts and vascular endothelial cells. XRF analysis confirmed elevated levels of palladium in the patient's skin in comparison to healthy controls. CONCLUSION: Long-term abuse of palladium-contaminated dihydrocodeinone ('Braun') results in excessive accumulation of granular material in various dermal cell types and causes generalized diffuse skin hyperpigmentation.


Assuntos
Hidrocodona/efeitos adversos , Hiperpigmentação/induzido quimicamente , Drogas Ilícitas/efeitos adversos , Entorpecentes/efeitos adversos , Paládio/efeitos adversos , Medicamentos Sintéticos/efeitos adversos , Feminino , Humanos , Hiperpigmentação/metabolismo , Hiperpigmentação/patologia , Masculino , Pessoa de Meia-Idade , Transtornos Relacionados com Narcóticos/complicações , Paládio/metabolismo , Espectrometria de Fluorescência
12.
Ecotoxicol Environ Saf ; 190: 110124, 2020 Mar 01.
Artigo em Inglês | MEDLINE | ID: mdl-31884328

RESUMO

Gram-negative Citrobacter freundii with high Pd (II) reduction capacity was isolated from electroplating wastewater, and the electron transfer involved in Pd (II) bio-reduction by C. freundii JH was investigated in phosphate buffer saline solution with sodium formate as sole electron donor under anaerobic condition. FTIR spectra indicated that hydroxyl and amine groups on cell wall participated Pd (II) bio-sorption. TEM, XRD, XPS results confirmed that Pd (0) nanoparticles (NPs) could be bio-synthesized intra/extracellularly. Meanwhile, pH turn-over were observed owing to the reduction of cytochrome c (c-Cyt) in bio-reduction process. EPR spectra indicated that free radicals (OH) was generated from high concentration Pd (II), which would cause seriously damage to cell. Despite of the lower tolerance to Pd (II), the cells at logarithmic phase exhibited higher Pd (II) reduction capacity (72.21%) than that at stationary phase (56.21%), which might be related to the relatively stronger proton motive force (PMF) created by the substrate oxidation and the electron transfer, as evidenced by electrochemical experiments (CV, DPV, amperometric I-t curves) and protein denaturalization experiments. Additionally, c-Cyt and riboflavin were confirmed to be important participants in electron transfer. Finally, a putative synthesis mechanism of Pd (0)-NPs was deduced. This study contributed to further understanding the electron transfer in Pd (II) reduction, and provided more information for the bio-synthetic of metal nanoparticles.


Assuntos
Citrobacter freundii/metabolismo , Paládio/metabolismo , Transporte de Elétrons , Elétrons , Formiatos , Nanopartículas Metálicas , Oxirredução
13.
Mikrochim Acta ; 187(4): 226, 2020 03 13.
Artigo em Inglês | MEDLINE | ID: mdl-32170394

RESUMO

Heparin was employed as the stabilizing agent in the synthesis of peroxidase-mimicking Pd nanoparticles. The heparin-capped Pd nanozyme can act as both the signal amplifier and the selective binder of protamine. The most efficient nanozyme with the mean size of 3.5 nm consists of 70.8% metallic Pd0 and 29.2% Pd2+ species. Enzyme kinetic studies show that the Km values are 0.036 mM for 3,3',5,5'-tetramethylbenzidine and 78 mM for H2O2. Protamine shows strong affinity to the heparin-capped Pd nanozyme, and induces an apparent aggregation of the nanoparticles. This results in a significant inhibition of the peroxidase-mimicking activities. Hence, the oxidation of TMB by H2O2 to a blue product with a maximum absorption at 652 nm is suppressed. Based on this finding, a photometric assay is developed for the determination of protamine. The linear response is in the concentration range 0.02 ~ 0.8 µg mL-1, and the limit of detection is 0.014 µg mL-1. This assay presents high selectivity toward other biological substances. Graphical abstract Highly active and selective Pd nanozyme was synthesized through adopting heparin as the capping agent for quantitative determination of protamine.


Assuntos
Heparina/química , Nanopartículas/química , Paládio/química , Peroxidase/química , Fotometria , Protaminas/análise , Heparina/metabolismo , Nanopartículas/metabolismo , Paládio/metabolismo , Peroxidase/metabolismo , Protaminas/metabolismo
14.
Bioprocess Biosyst Eng ; 43(10): 1885-1897, 2020 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-32448988

RESUMO

It is important to recover precious metals from secondary wastewater because of their low crustal abundance. The selective adsorption of palladium (Pd) and platinum (Pt) ions from secondary wastewater, which contains a large amount aluminium and sodium ions, was investigated using Escherichia coli BL21 (BL21), genetically modified E. coli BL21 (EC20) and Providencia vermicola (P. V.). The results demonstrated that P.V., BL21 and EC20 cells took 95.9%, 88.2% and 97.5% of Pd ions, and 64.8%, 93.2% and 100% of Pt ions form industrial wastewater, respectively. All three bacterial biomass could be reused for Pd adsorption with a second adsorption efficiency of > 85%, specifically, the EC20 cells could absorb 93.8% of Pd ions from wastewater. SEM-EDS and XPS analyses confirmed the occurrence of Pd and Pt on the surface of wastewater-absorbed biomass. The shift in FTIR spectrum implied that functional groups, such as hydroxyl, amino, carboxyl and phosphate groups, were involved in wastewater adsorption.


Assuntos
Escherichia coli/metabolismo , Paládio/metabolismo , Platina/metabolismo , Providencia/metabolismo , Águas Residuárias/microbiologia , Poluentes Químicos da Água/metabolismo , Adsorção
15.
Int J Mol Sci ; 21(23)2020 Dec 02.
Artigo em Inglês | MEDLINE | ID: mdl-33276669

RESUMO

The Aß4-42 peptide is a major beta-amyloid species in the human brain, forming toxic aggregates related to Alzheimer's Disease. It also strongly chelates Cu(II) at the N-terminal Phe-Arg-His ATCUN motif, as demonstrated in Aß4-16 and Aß4-9 model peptides. The resulting complex resists ROS generation and exchange processes and may help protect synapses from copper-related oxidative damage. Structural characterization of Cu(II)Aß4-x complexes by NMR would help elucidate their biological function, but is precluded by Cu(II) paramagneticism. Instead we used an isostructural diamagnetic Pd(II)-Aß4-16 complex as a model. To avoid a kinetic trapping of Pd(II) in an inappropriate transient structure, we designed an appropriate pH-dependent synthetic procedure for ATCUN Pd(II)Aß4-16, controlled by CD, fluorescence and ESI-MS. Its assignments and structure at pH 6.5 were obtained by TOCSY, NOESY, ROESY, 1H-13C HSQC and 1H-15N HSQC NMR experiments, for natural abundance 13C and 15N isotopes, aided by corresponding experiments for Pd(II)-Phe-Arg-His. The square-planar Pd(II)-ATCUN coordination was confirmed, with the rest of the peptide mostly unstructured. The diffusion rates of Aß4-16, Pd(II)-Aß4-16 and their mixture determined using PGSE-NMR experiment suggested that the Pd(II) complex forms a supramolecular assembly with the apopeptide. These results confirm that Pd(II) substitution enables NMR studies of structural aspects of Cu(II)-Aß complexes.


Assuntos
Peptídeos beta-Amiloides/química , Cátions/química , Complexos de Coordenação/química , Cobre/química , Paládio/química , Motivos de Aminoácidos , Peptídeos beta-Amiloides/metabolismo , Complexos de Coordenação/metabolismo , Humanos , Espectroscopia de Ressonância Magnética , Modelos Moleculares , Modelos Teóricos , Conformação Molecular , Paládio/metabolismo , Soluções , Relação Estrutura-Atividade
16.
Microbiology (Reading) ; 165(12): 1282-1294, 2019 12.
Artigo em Inglês | MEDLINE | ID: mdl-31361216

RESUMO

Platinum and palladium are much sought-after metals of critical global importance in terms of abundance and availability. At the nano-scale these metals are of even higher value due to their catalytic abilities for industrial applications. Desulfovibrio alaskensis is able to capture ionic forms of both of these metals, reduce them and synthesize elemental nanoparticles. Despite this ability, very little is known about the biological pathways involved in the formation of these nanoparticles. Proteomic analysis of D. alaskensis in response to platinum and palladium has highlighted those proteins involved in both the reductive pathways and the wider stress-response system. A core set of 13 proteins was found in both treatments and consisted of proteins involved in metal transport and reduction. There were also seven proteins that were specific to either platinum or palladium. Overexpression of one of these platinum-specific genes, a NiFe hydrogenase small subunit (Dde_2137), resulted in the formation of larger nanoparticles. This study improves our understanding of the pathways involved in the metal resistance mechanism of Desulfovibrio and is informative regarding how we can tailor the bacterium for nanoparticle production, enhancing its application as a bioremediation tool and as a way to capture contaminant metals from the environment.


Assuntos
Proteínas de Bactérias/metabolismo , Desulfovibrio/metabolismo , Nanopartículas Metálicas , Paládio/metabolismo , Platina/metabolismo , Proteínas de Bactérias/genética , Biodegradação Ambiental , Desulfovibrio/genética , Hidrogenase/genética , Hidrogenase/metabolismo , Nanopartículas Metálicas/química , Modelos Biológicos , Tamanho da Partícula , Proteômica
17.
Molecules ; 24(19)2019 Sep 30.
Artigo em Inglês | MEDLINE | ID: mdl-31575030

RESUMO

The Pd-catalyzed intramolecular carbene C-H insertion of α-diazo-α-(methoxycarbonyl)acetamides to prepare oxindoles as well as ß-lactams was studied. In order to identify what factors influence the selectivity of the processes, we explored how the reactions are affected by the catalyst type, using two oxidation states of Pd and a variety of ligands. It was found that, in the synthesis of oxindoles, ((IMes)Pd(NQ))2 can be used as an alternative to Pd2(dba)3 to catalyze the carbene CArsp2-H insertion, although it was less versatile. On the other hand, it was demonstrated that the Csp3-H insertion leading to ß-lactams can be effectively promoted by both Pd(0) and Pd(II) catalysts, the latter being most efficient. Insight into the reaction mechanisms involved in these transformations was provided by DFT calculations.


Assuntos
Acetamidas/química , Compostos de Diazônio/química , Paládio/química , Catálise , Modelos Moleculares , Estrutura Molecular , Oxindóis/metabolismo , Paládio/metabolismo , beta-Lactamas/metabolismo
18.
Angew Chem Int Ed Engl ; 58(2): 592-595, 2019 01 08.
Artigo em Inglês | MEDLINE | ID: mdl-30444946

RESUMO

Organoboron "ate" complexes undergo a net vinyl insertion reaction to give 1,1-disubstituted alkenyl boronic esters when treated with stoichiometric allyl acetate and a palladium catalyst. Reactions that employ vinyllithium afforded good to excellent yields after one hour, while reactions that employ vinylmagnesium chloride furnished modest to good yields after 18 hours.


Assuntos
Ésteres/metabolismo , Paládio/metabolismo , Catálise , Estrutura Molecular
19.
J Am Chem Soc ; 140(28): 8807-8816, 2018 07 18.
Artigo em Inglês | MEDLINE | ID: mdl-29984990

RESUMO

Selenoproteins containing the 21st amino acid selenocysteine (Sec) exist in all three kingdoms of life and play essential roles in human health and development. The distinct low p Ka, high reactivity, and redox property of Sec also afford unique routes to protein modification and engineering. However, natural Sec incorporation requires idiosyncratic translational machineries that are dedicated to Sec and species-dependent, which makes it challenging to recombinantly prepare selenoproteins with high Sec specificity. As a consequence, the function of half of human selenoproteins remains unclear, and Sec-based protein manipulation has been greatly hampered. Here we report a new general method enabling the site-specific incorporation of Sec into proteins in E. coli. An orthogonal tRNAPyl-ASecRS was evolved to specifically incorporate Se-allyl selenocysteine (ASec) in response to the amber codon, and the incorporated ASec was converted to Sec in high efficiency through palladium-mediated cleavage under mild conditions compatible with proteins and cells. This approach completely obviates the natural Sec-dedicated factors, thus allowing various selenoproteins, regardless of Sec position and species source, to be prepared with high Sec specificity and enzyme activity, as shown by the preparation of human thioredoxin and glutathione peroxidase 1. Sec-selective labeling in the presence of Cys was also demonstrated on the surface of live E. coli cells. The tRNAPyl-ASecRS pair was further used in mammalian cells to incorporate ASec, which was converted into Sec by palladium catalyst in cellulo. This robust and versatile method should greatly facilitate the study of diverse natural selenoproteins and the engineering of proteins in general via site-specific introduction of Sec.


Assuntos
Paládio/metabolismo , Engenharia de Proteínas/métodos , Selenocisteína/genética , Selenoproteínas/genética , Códon de Terminação , Escherichia coli/genética , Escherichia coli/metabolismo , Proteínas de Escherichia coli/genética , Proteínas de Escherichia coli/metabolismo , Código Genético , Glutationa Peroxidase/genética , Glutationa Peroxidase/metabolismo , Células HeLa , Humanos , Modelos Moleculares , Biossíntese de Proteínas , Selenocisteína/metabolismo , Selenoproteínas/metabolismo , Tiorredoxinas/genética , Tiorredoxinas/metabolismo , Glutationa Peroxidase GPX1
20.
Bioconjug Chem ; 29(11): 3856-3865, 2018 11 21.
Artigo em Inglês | MEDLINE | ID: mdl-30380298

RESUMO

Cisplatin occupies a crucial role in the treatment of various malignant tumors. However, its efficacy and applicability are heavily restricted by severe systemic toxicities and drug resistance. Our study exploits the active targeting of supramolecular metallacages to enhance the activity of cisplatin in cancer cells while reducing its toxicity. Thus, Pd2L4 cages (L = ligand) have been conjugated to four integrin ligands with different binding affinity and selectivity. Cage formation and encapsulation of cisplatin was proven by NMR spectroscopy. Upon encapsulation, cisplatin showed increased cytotoxicity in vitro, in melanoma A375 cells overexpressing αvß3 integrins. Moreover, ex vivo studies in tissue slices indicated reduced toxicity toward healthy liver and kidney tissues for cage-encapsulated cisplatin. Analysis of metal content by ICP-MS demonstrated that the encapsulated drug is less accumulated in these organs compared to the "free" cisplatin.


Assuntos
Antineoplásicos/administração & dosagem , Cisplatino/administração & dosagem , Portadores de Fármacos/metabolismo , Integrina alfaVbeta3/metabolismo , Melanoma/tratamento farmacológico , Estruturas Metalorgânicas/metabolismo , Paládio/metabolismo , Animais , Antineoplásicos/farmacologia , Linhagem Celular Tumoral , Cisplatino/farmacologia , Portadores de Fármacos/química , Sistemas de Liberação de Medicamentos , Humanos , Ligantes , Masculino , Melanoma/metabolismo , Estruturas Metalorgânicas/química , Paládio/química , Ratos Wistar
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