HAPCAD: An open-source tool to detect PCR crossovers in next-generation sequencing generated HLA data.

McDevitt, Shana L; Bredeson, Jessen V; Roy, Scott W; Lane, Julie A; Noble, Janelle A

McDevitt, Shana L; Bredeson, Jessen V; Roy, Scott W; Lane, Julie A; Noble, Janelle A.

Afiliação

McDevitt SL; Children's Hospital Oakland Research Institute, 5700 Martin Luther King Jr. Way, Oakland, CA 94609, USA; San Francisco State University, Department of Biology, 1600 Holloway Avenue, San Francisco, CA 94132, USA. Electronic address: shana.mcdevitt@gmail.com.
Bredeson JV; Department of Molecular & Cell Biology, University of California, 142 LSA #3200, Berkeley, CA 94720, USA. Electronic address: jessenbredeson@berkeley.edu.
Roy SW; San Francisco State University, Department of Biology, 1600 Holloway Avenue, San Francisco, CA 94132, USA. Electronic address: scottwroy@gmail.com.
Lane JA; Children's Hospital Oakland Research Institute, 5700 Martin Luther King Jr. Way, Oakland, CA 94609, USA. Electronic address: jlane@chori.org.
Noble JA; Children's Hospital Oakland Research Institute, 5700 Martin Luther King Jr. Way, Oakland, CA 94609, USA. Electronic address: jnoble@chori.org.

Hum Immunol ; 77(3): 257-263, 2016 Mar.

Article em En | MEDLINE | ID: mdl-26802209

Assuntos

Artefatos; Biologia Computacional/métodos; Antígenos HLA/genética; Sequenciamento de Nucleotídeos em Larga Escala; Reação em Cadeia da Polimerase; Software; Bases de Dados Genéticas; Humanos; Navegador

Palavras-chave

Human Leukocyte Antigen; IMGT/HLA Database; Next-generation sequencing; Open-source tools; PCR crossovers

Texto completo

Imprimir

XML

PubMed Links

Buscar no Google

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Software / Reação em Cadeia da Polimerase / Artefatos / Biologia Computacional / Sequenciamento de Nucleotídeos em Larga Escala / Antígenos HLA Limite: Humans Idioma: En Revista: Hum Immunol Ano de publicação: 2016 Tipo de documento: Article

Texto completo

Imprimir

XML

PubMed Links

Buscar no Google