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Complete genome of Arthrobacter alpinus strain R3.8, bioremediation potential unraveled with genomic analysis.
See-Too, Wah-Seng; Ee, Robson; Lim, Yan-Lue; Convey, Peter; Pearce, David A; Mohidin, Taznim Begam Mohd; Yin, Wai-Fong; Chan, Kok Gan.
Afiliação
  • See-Too WS; Division of Genetics and Molecular Biology, Institute of Biological Sciences, Faculty of Science, University of Malaya, Kuala Lumpur, Malaysia.
  • Ee R; National Antarctic Research Centre (NARC), Institute of Postgraduate Studies, University of Malaya, 50603 Kuala Lumpur, Malaysia.
  • Lim YL; Division of Genetics and Molecular Biology, Institute of Biological Sciences, Faculty of Science, University of Malaya, Kuala Lumpur, Malaysia.
  • Convey P; Division of Genetics and Molecular Biology, Institute of Biological Sciences, Faculty of Science, University of Malaya, Kuala Lumpur, Malaysia.
  • Pearce DA; National Antarctic Research Centre (NARC), Institute of Postgraduate Studies, University of Malaya, 50603 Kuala Lumpur, Malaysia.
  • Mohidin TBM; British Antarctic Survey, NERC, High Cross, Madingley Road, Cambridge, CB3 OET UK.
  • Yin WF; National Antarctic Research Centre (NARC), Institute of Postgraduate Studies, University of Malaya, 50603 Kuala Lumpur, Malaysia.
  • Chan KG; British Antarctic Survey, NERC, High Cross, Madingley Road, Cambridge, CB3 OET UK.
Stand Genomic Sci ; 12: 52, 2017.
Article em En | MEDLINE | ID: mdl-28904741
ABSTRACT
Arthrobacter alpinus R3.8 is a psychrotolerant bacterial strain isolated from a soil sample obtained at Rothera Point, Adelaide Island, close to the Antarctic Peninsula. Strain R3.8 was sequenced in order to help discover potential cold active enzymes with biotechnological applications. Genome analysis identified various cold adaptation genes including some coding for anti-freeze proteins and cold-shock proteins, genes involved in bioremediation of xenobiotic compounds including naphthalene, and genes with chitinolytic and N-acetylglucosamine utilization properties and also plant-growth-influencing properties. In this genome report, we present a complete genome sequence of A. alpinus strain R3.8 and its annotation data, which will facilitate exploitation of potential novel cold-active enzymes.
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Texto completo: 1 Base de dados: MEDLINE Tipo de estudo: Prognostic_studies Idioma: En Revista: Stand Genomic Sci Ano de publicação: 2017 Tipo de documento: Article País de afiliação: Malásia

Texto completo: 1 Base de dados: MEDLINE Tipo de estudo: Prognostic_studies Idioma: En Revista: Stand Genomic Sci Ano de publicação: 2017 Tipo de documento: Article País de afiliação: Malásia