Comparison of kNN and k-means optimization methods of reference set selection for improved CNV callers performance.

Kusmirek, Wiktor; Szmurlo, Agnieszka; Wiewiórka, Marek; Nowak, Robert; Gambin, Tomasz

Kusmirek, Wiktor; Szmurlo, Agnieszka; Wiewiórka, Marek; Nowak, Robert; Gambin, Tomasz.

Afiliação

Kusmirek W; Institute of Computer Science, Warsaw University of Technology, ul. Nowowiejska 15/19, Warsaw, 00-665, Poland.
Szmurlo A; Institute of Computer Science, Warsaw University of Technology, ul. Nowowiejska 15/19, Warsaw, 00-665, Poland.
Wiewiórka M; Institute of Computer Science, Warsaw University of Technology, ul. Nowowiejska 15/19, Warsaw, 00-665, Poland.
Nowak R; Institute of Computer Science, Warsaw University of Technology, ul. Nowowiejska 15/19, Warsaw, 00-665, Poland.
Gambin T; Institute of Computer Science, Warsaw University of Technology, ul. Nowowiejska 15/19, Warsaw, 00-665, Poland. T.Gambin@ii.pw.edu.pl.

BMC Bioinformatics ; 20(1): 266, 2019 May 28.

Article em En | MEDLINE | ID: mdl-31138108

Assuntos

Algoritmos; Variações do Número de Cópias de DNA/genética; Benchmarking; Bases de Dados Genéticas; Feminino; Humanos; Masculino; Padrões de Referência; Tamanho da Amostra

Palavras-chave

Clustering; Copy number variation; Next-generation sequencing; Read depth

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Texto completo: 1 Base de dados: MEDLINE Assunto principal: Algoritmos / Variações do Número de Cópias de DNA Limite: Female / Humans / Male Idioma: En Revista: BMC Bioinformatics Assunto da revista: INFORMATICA MEDICA Ano de publicação: 2019 Tipo de documento: Article País de afiliação: Polônia

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