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Proficiency Testing of Virus Diagnostics Based on Bioinformatics Analysis of Simulated In Silico High-Throughput Sequencing Data Sets.
Brinkmann, Annika; Andrusch, Andreas; Belka, Ariane; Wylezich, Claudia; Höper, Dirk; Pohlmann, Anne; Nordahl Petersen, Thomas; Lucas, Pierrick; Blanchard, Yannick; Papa, Anna; Melidou, Angeliki; Oude Munnink, Bas B; Matthijnssens, Jelle; Deboutte, Ward; Ellis, Richard J; Hansmann, Florian; Baumgärtner, Wolfgang; van der Vries, Erhard; Osterhaus, Albert; Camma, Cesare; Mangone, Iolanda; Lorusso, Alessio; Marcacci, Maurilia; Nunes, Alexandra; Pinto, Miguel; Borges, Vítor; Kroneman, Annelies; Schmitz, Dennis; Corman, Victor Max; Drosten, Christian; Jones, Terry C; Hendriksen, Rene S; Aarestrup, Frank M; Koopmans, Marion; Beer, Martin; Nitsche, Andreas.
Afiliação
  • Brinkmann A; Robert Koch Institute, Centre for Biological Threats and Special Pathogens 1, Berlin, Germany BrinkmannA@rki.de.
  • Andrusch A; Robert Koch Institute, Centre for Biological Threats and Special Pathogens 1, Berlin, Germany.
  • Belka A; Friedrich-Loeffler-Institut, Institute of Diagnostic Virology, Greifswald-Insel Riems, Germany.
  • Wylezich C; Friedrich-Loeffler-Institut, Institute of Diagnostic Virology, Greifswald-Insel Riems, Germany.
  • Höper D; Friedrich-Loeffler-Institut, Institute of Diagnostic Virology, Greifswald-Insel Riems, Germany.
  • Pohlmann A; Friedrich-Loeffler-Institut, Institute of Diagnostic Virology, Greifswald-Insel Riems, Germany.
  • Nordahl Petersen T; Technical University of Denmark, National Food Institute, WHO Collaborating Center for Antimicrobial Resistance in Foodborne Pathogens and Genomics and European Union Reference Laboratory for Antimicrobial Resistance, Kongens Lyngby, Denmark.
  • Lucas P; French Agency for Food, Environmental and Occupational Health and Safety, Laboratory of Ploufragan, Unit of Viral Genetics and Biosafety, Ploufragan, France.
  • Blanchard Y; French Agency for Food, Environmental and Occupational Health and Safety, Laboratory of Ploufragan, Unit of Viral Genetics and Biosafety, Ploufragan, France.
  • Papa A; Microbiology Department, Aristotle University of Thessaloniki, School of Medicine, Thessaloniki, Greece.
  • Melidou A; Microbiology Department, Aristotle University of Thessaloniki, School of Medicine, Thessaloniki, Greece.
  • Oude Munnink BB; Department of Viroscience, Erasmus Medical Centre, Rotterdam, The Netherlands.
  • Matthijnssens J; REGA Institute KU Leuven, Leuven, Belgium.
  • Deboutte W; REGA Institute KU Leuven, Leuven, Belgium.
  • Ellis RJ; Animal and Plant Health Agency, Addlestone, United Kingdom.
  • Hansmann F; Department of Pathology, University of Veterinary Medicine Hannover, Hannover, Germany.
  • Baumgärtner W; Department of Pathology, University of Veterinary Medicine Hannover, Hannover, Germany.
  • van der Vries E; Department of Infectious Diseases and Immunology, University of Utrecht, Utrecht, The Netherlands.
  • Osterhaus A; Artemis One Health Research Institute, Utrecht, The Netherlands.
  • Camma C; Istituto Zooprofilattico Sperimentale dell'Abruzzo e Molise G. Caporale, National Reference Center for Whole Genome Sequencing of Microbial Pathogens: Database and Bioinformatic Analysis, Teramo, Italy.
  • Mangone I; Istituto Zooprofilattico Sperimentale dell'Abruzzo e Molise G. Caporale, National Reference Center for Whole Genome Sequencing of Microbial Pathogens: Database and Bioinformatic Analysis, Teramo, Italy.
  • Lorusso A; Istituto Zooprofilattico Sperimentale dell'Abruzzo e Molise G. Caporale, National Reference Center for Whole Genome Sequencing of Microbial Pathogens: Database and Bioinformatic Analysis, Teramo, Italy.
  • Marcacci M; Istituto Zooprofilattico Sperimentale dell'Abruzzo e Molise G. Caporale, National Reference Center for Whole Genome Sequencing of Microbial Pathogens: Database and Bioinformatic Analysis, Teramo, Italy.
  • Nunes A; Bioinformatics Unit, Department of Infectious Diseases, National Institute of Health (INSA), Lisbon, Portugal.
  • Pinto M; Bioinformatics Unit, Department of Infectious Diseases, National Institute of Health (INSA), Lisbon, Portugal.
  • Borges V; Bioinformatics Unit, Department of Infectious Diseases, National Institute of Health (INSA), Lisbon, Portugal.
  • Kroneman A; National Institute for Public Health and the Environment, Bilthoven, The Netherlands.
  • Schmitz D; Department of Viroscience, Erasmus Medical Centre, Rotterdam, The Netherlands.
  • Corman VM; National Institute for Public Health and the Environment, Bilthoven, The Netherlands.
  • Drosten C; Institute of Virology, Charité-Universitätsmedizin Berlin, Berlin, Germany.
  • Jones TC; Institute of Virology, Charité-Universitätsmedizin Berlin, Berlin, Germany.
  • Hendriksen RS; Institute of Virology, Charité-Universitätsmedizin Berlin, Berlin, Germany.
  • Aarestrup FM; Center for Pathogen Evolution, Department of Zoology, University of Cambridge, Cambridge, United Kingdom.
  • Koopmans M; Technical University of Denmark, National Food Institute, WHO Collaborating Center for Antimicrobial Resistance in Foodborne Pathogens and Genomics and European Union Reference Laboratory for Antimicrobial Resistance, Kongens Lyngby, Denmark.
  • Beer M; Technical University of Denmark, National Food Institute, WHO Collaborating Center for Antimicrobial Resistance in Foodborne Pathogens and Genomics and European Union Reference Laboratory for Antimicrobial Resistance, Kongens Lyngby, Denmark.
  • Nitsche A; Department of Viroscience, Erasmus Medical Centre, Rotterdam, The Netherlands.
J Clin Microbiol ; 57(8)2019 08.
Article em En | MEDLINE | ID: mdl-31167846
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Texto completo: 1 Base de dados: MEDLINE Assunto principal: Vírus / Simulação por Computador / Análise de Sequência de DNA / Biologia Computacional / Sequenciamento de Nucleotídeos em Larga Escala / Ensaio de Proficiência Laboratorial Tipo de estudo: Diagnostic_studies / Prognostic_studies Limite: Humans País/Região como assunto: Europa Idioma: En Revista: J Clin Microbiol Ano de publicação: 2019 Tipo de documento: Article País de afiliação: Alemanha
Texto completo
Imprimir
XML
PubMed Links
Buscar no Google

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Vírus / Simulação por Computador / Análise de Sequência de DNA / Biologia Computacional / Sequenciamento de Nucleotídeos em Larga Escala / Ensaio de Proficiência Laboratorial Tipo de estudo: Diagnostic_studies / Prognostic_studies Limite: Humans País/Região como assunto: Europa Idioma: En Revista: J Clin Microbiol Ano de publicação: 2019 Tipo de documento: Article País de afiliação: Alemanha