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Robust deep learning classification of adamantinomatous craniopharyngioma from limited preoperative radiographic images.
Prince, Eric W; Whelan, Ros; Mirsky, David M; Stence, Nicholas; Staulcup, Susan; Klimo, Paul; Anderson, Richard C E; Niazi, Toba N; Grant, Gerald; Souweidane, Mark; Johnston, James M; Jackson, Eric M; Limbrick, David D; Smith, Amy; Drapeau, Annie; Chern, Joshua J; Kilburn, Lindsay; Ginn, Kevin; Naftel, Robert; Dudley, Roy; Tyler-Kabara, Elizabeth; Jallo, George; Handler, Michael H; Jones, Kenneth; Donson, Andrew M; Foreman, Nicholas K; Hankinson, Todd C.
Afiliação
  • Prince EW; Division of Pediatric Neurosurgery, Children's Hospital Colorado, Aurora, 80045, USA. Eric.Prince@CUAnschutz.edu.
  • Whelan R; Department of Neurosurgery, University of Colorado School of Medicine, Aurora, 80045, USA. Eric.Prince@CUAnschutz.edu.
  • Mirsky DM; Morgan Adams Foundation Pediatric Brain Tumor Research Program, Aurora, 80045, USA. Eric.Prince@CUAnschutz.edu.
  • Stence N; Department of Neurosurgery, University of Colorado School of Medicine, Aurora, 80045, USA.
  • Staulcup S; Division of Pediatric Radiology, Children's Hospital Colorado, Aurora, 80045, USA.
  • Klimo P; Division of Pediatric Radiology, Children's Hospital Colorado, Aurora, 80045, USA.
  • Anderson RCE; Department of Neurosurgery, University of Colorado School of Medicine, Aurora, 80045, USA.
  • Niazi TN; Department of Neurosurgery, University of Tennessee Health and Sciences Center, Memphis, 38163, USA.
  • Grant G; Semmes Murphy Clinic, St. Jude Children's Research Hospital, Memphis, 38105, USA.
  • Souweidane M; Neurosurgical Associates of New Jersey, Ridgewood, NJ, 07450, USA.
  • Johnston JM; Department of Pediatric Neurosurgery, Nicklaus Children's Hospital, Miami, 33155, USA.
  • Jackson EM; Department of Pediatric Neurosurgery, Lucile Packard Children's Hospital at Stanford University, Palo Alto, 94305, USA.
  • Limbrick DD; Department of Neurosurgery, Memorial Sloan Kettering Cancer Center, New York, 10065, USA.
  • Smith A; Department of Neurological Surgery, Weill Cornell Medical College, New York, 10065, USA.
  • Drapeau A; Division of Pediatric Neurosurgery, University of Alabama at Birmingham, Birmingham, 35233, USA.
  • Chern JJ; Department of Neurosurgery, Johns Hopkins University School of Medicine, Baltimore, 21205, USA.
  • Kilburn L; Department of Pediatrics, Washington University School of Medicine, St. Louis, 63110, USA.
  • Ginn K; Department of Pediatric Hematology-Oncology, Arnold Palmer Hospital, Orlando, 32806, USA.
  • Naftel R; Division of Pediatric Neurosurgery, Nationwide Children's Hospital, Columbus, 43205, USA.
  • Dudley R; Departments of Pediatrics and Neurosurgery, Emory University School of Medicine, Atlanta, 30322, USA.
  • Tyler-Kabara E; Children's National Health System, Brain Tumor Institute, Washington, DC, 20010, USA.
  • Jallo G; Division of Pediatric Hematology and Oncology, Children's Mercy Hospital, Kansas City, 64108, USA.
  • Handler MH; Department of Neurological Surgery, Monroe Carell Jr. Children's Hospital at Vanderbilt, Nashville, 37212, USA.
  • Jones K; Department of Neurosurgery, McGill University, Montreal, H3A 2B4, Canada.
  • Donson AM; Department of Neurological Surgery, University of Pittsburgh, Pittsburgh, 15213, USA.
  • Foreman NK; Institute of Brain Protection Sciences, Johns Hopkins All Children's Hospital, St Petersburg, 33701, USA.
  • Hankinson TC; Division of Pediatric Neurosurgery, Children's Hospital Colorado, Aurora, 80045, USA.
Sci Rep ; 10(1): 16885, 2020 10 09.
Article em En | MEDLINE | ID: mdl-33037266
ABSTRACT
Deep learning (DL) is a widely applied mathematical modeling technique. Classically, DL models utilize large volumes of training data, which are not available in many healthcare contexts. For patients with brain tumors, non-invasive diagnosis would represent a substantial clinical advance, potentially sparing patients from the risks associated with surgical intervention on the brain. Such an approach will depend upon highly accurate models built using the limited datasets that are available. Herein, we present a novel genetic algorithm (GA) that identifies optimal architecture parameters using feature embeddings from state-of-the-art image classification networks to identify the pediatric brain tumor, adamantinomatous craniopharyngioma (ACP). We optimized classification models for preoperative Computed Tomography (CT), Magnetic Resonance Imaging (MRI), and combined CT and MRI datasets with demonstrated test accuracies of 85.3%, 83.3%, and 87.8%, respectively. Notably, our GA improved baseline model performance by up to 38%. This work advances DL and its applications within healthcare by identifying optimized networks in small-scale data contexts. The proposed system is easily implementable and scalable for non-invasive computer-aided diagnosis, even for uncommon diseases.
Assuntos

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Processamento de Imagem Assistida por Computador / Neoplasias Encefálicas / Imageamento por Ressonância Magnética / Tomografia Computadorizada por Raios X / Diagnóstico por Computador / Craniofaringioma / Aprendizado Profundo Tipo de estudo: Diagnostic_studies Limite: Humans Idioma: En Revista: Sci Rep Ano de publicação: 2020 Tipo de documento: Article País de afiliação: Estados Unidos

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Processamento de Imagem Assistida por Computador / Neoplasias Encefálicas / Imageamento por Ressonância Magnética / Tomografia Computadorizada por Raios X / Diagnóstico por Computador / Craniofaringioma / Aprendizado Profundo Tipo de estudo: Diagnostic_studies Limite: Humans Idioma: En Revista: Sci Rep Ano de publicação: 2020 Tipo de documento: Article País de afiliação: Estados Unidos