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Interrogating theoretical models of neural computation with emergent property inference.
Bittner, Sean R; Palmigiano, Agostina; Piet, Alex T; Duan, Chunyu A; Brody, Carlos D; Miller, Kenneth D; Cunningham, John.
Afiliação
  • Bittner SR; Department of Neuroscience, Columbia University, New York, United States.
  • Palmigiano A; Department of Neuroscience, Columbia University, New York, United States.
  • Piet AT; Princeton Neuroscience Institute, Princeton, United States.
  • Duan CA; Princeton University, Princeton, United States.
  • Brody CD; Allen Institute for Brain Science, Seattle, United States.
  • Miller KD; Institute of Neuroscience, Chinese Academy of Sciences, Shanghai, China.
  • Cunningham J; Princeton Neuroscience Institute, Princeton, United States.
Elife ; 102021 07 29.
Article em En | MEDLINE | ID: mdl-34323690
ABSTRACT
A cornerstone of theoretical neuroscience is the circuit model a system of equations that captures a hypothesized neural mechanism. Such models are valuable when they give rise to an experimentally observed phenomenon -- whether behavioral or a pattern of neural activity -- and thus can offer insights into neural computation. The operation of these circuits, like all models, critically depends on the choice of model parameters. A key step is then to identify the model parameters consistent with observed phenomena to solve the inverse problem. In this work, we present a novel technique, emergent property inference (EPI), that brings the modern probabilistic modeling toolkit to theoretical neuroscience. When theorizing circuit models, theoreticians predominantly focus on reproducing computational properties rather than a particular dataset. Our method uses deep neural networks to learn parameter distributions with these computational properties. This methodology is introduced through a motivational example of parameter inference in the stomatogastric ganglion. EPI is then shown to allow precise control over the behavior of inferred parameters and to scale in parameter dimension better than alternative techniques. In the remainder of this work, we present novel theoretical findings in models of primary visual cortex and superior colliculus, which were gained through the examination of complex parametric structure captured by EPI. Beyond its scientific contribution, this work illustrates the variety of analyses possible once deep learning is harnessed towards solving theoretical inverse problems.
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Texto completo: 1 Base de dados: MEDLINE Assunto principal: Córtex Visual / Redes Neurais de Computação / Biologia Computacional / Modelos Neurológicos Tipo de estudo: Prognostic_studies / Risk_factors_studies Idioma: En Revista: Elife Ano de publicação: 2021 Tipo de documento: Article País de afiliação: Estados Unidos

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Córtex Visual / Redes Neurais de Computação / Biologia Computacional / Modelos Neurológicos Tipo de estudo: Prognostic_studies / Risk_factors_studies Idioma: En Revista: Elife Ano de publicação: 2021 Tipo de documento: Article País de afiliação: Estados Unidos