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New insights into genome folding by loop extrusion from inducible degron technologies.
de Wit, Elzo; Nora, Elphège P.
Afiliação
  • de Wit E; Division of Gene Regulation, Oncode Institute, Amsterdam, the Netherlands. e.d.wit@nki.nl.
  • Nora EP; Division of Gene Regulation, Netherlands Cancer Institute, Amsterdam, the Netherlands. e.d.wit@nki.nl.
Nat Rev Genet ; 24(2): 73-85, 2023 02.
Article em En | MEDLINE | ID: mdl-36180596
Chromatin folds into dynamic loops that often span hundreds of kilobases and physically wire distant loci together for gene regulation. These loops are continuously created, extended and positioned by structural maintenance of chromosomes (SMC) protein complexes, such as condensin and cohesin, and their regulators, including CTCF, in a highly dynamic process known as loop extrusion. Genetic loss of extrusion factors is lethal, complicating their study. Inducible protein degradation technologies enable the depletion of loop extrusion factors within hours, leading to the rapid reconfiguration of chromatin folding. Here, we review how these technologies have changed our understanding of genome organization, upsetting long-held beliefs on its role in transcription. Finally, we examine recent models that attempt to reconcile observations after chronic versus acute perturbations, and discuss future developments in this rapidly developing field of research.
Assuntos

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Cromatina / Cromossomos Tipo de estudo: Prognostic_studies Idioma: En Revista: Nat Rev Genet Assunto da revista: GENETICA Ano de publicação: 2023 Tipo de documento: Article País de afiliação: Holanda

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Cromatina / Cromossomos Tipo de estudo: Prognostic_studies Idioma: En Revista: Nat Rev Genet Assunto da revista: GENETICA Ano de publicação: 2023 Tipo de documento: Article País de afiliação: Holanda