Strain level microbial detection and quantification with applications to single cell metagenomics.

Zhu, Kaiyuan; Schäffer, Alejandro A; Robinson, Welles; Xu, Junyan; Ruppin, Eytan; Ergun, A Funda; Ye, Yuzhen; Sahinalp, S Cenk

Zhu, Kaiyuan; Schäffer, Alejandro A; Robinson, Welles; Xu, Junyan; Ruppin, Eytan; Ergun, A Funda; Ye, Yuzhen; Sahinalp, S Cenk.

Afiliação

Zhu K; Cancer Data Science Laboratory, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA.
Schäffer AA; Department of Computer Science & Engineering, UC San Diego, La Jolla, CA, USA.
Robinson W; Department of Computer Science, Indiana University, Bloomington, IN, USA.
Xu J; Cancer Data Science Laboratory, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA.
Ruppin E; Cancer Data Science Laboratory, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA.
Ergun AF; Surgery Branch, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA.
Ye Y; Cancer Data Science Laboratory, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA.
Sahinalp SC; Cancer Data Science Laboratory, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA.

Nat Commun ; 13(1): 6430, 2022 10 28.

Article em En | MEDLINE | ID: mdl-36307411

Assuntos

Metagenoma; Metagenômica; Humanos; Metagenômica/métodos; Metagenoma/genética; Sequenciamento de Nucleotídeos em Larga Escala/métodos; Bactérias/genética; Algoritmos; Análise de Sequência de DNA/métodos

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Texto completo: 1 Base de dados: MEDLINE Assunto principal: Metagenoma / Metagenômica Tipo de estudo: Diagnostic_studies / Prognostic_studies Limite: Humans Idioma: En Revista: Nat Commun Assunto da revista: BIOLOGIA / CIENCIA Ano de publicação: 2022 Tipo de documento: Article País de afiliação: Estados Unidos

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