Zeimonas sediminis sp. nov., isolated from mangrove sediment.
Int J Syst Evol Microbiol
; 73(1)2023 Feb.
Article
em En
| MEDLINE
| ID: mdl-36748486
A Gram-stain-negative, strictly aerobic, motile, rod-shaped bacterium, FT117T, was isolated from mangrove sediment collected in Shenzhen, Guangdong, PR China. Growth occurred at 20-45 °C (optimum, 40 °C), pH 6-10 (optimum, 8) and in the presence of 0-5â% NaCl (optimum, 0â%). The results of 16S rRNA gene sequence analysis indicated that the identity between FT117T and Zeimonas arvi CC-CFT501T was the highest (98.7â%), followed by Quisquiliibacterium transsilvanicum JCM 31785T (93.6â%), Lautropia mirabilis CCUG 34794T (93.6â%) and Pandoraea eparura LMG 31012T (93.5â%). The main fatty acids (>10â%) were C16â:â0 (35.8â%), cyclo-C17â:â0 (18.5â%) and summed feature 3 (18.1â%). The polar lipids contained phosphatidylethanolamine, diphosphatidylglycerol, phosphatidylglycerol, two unidentified phospholipids, two unidentified aminophospholipids and one unidentified lipid. The sole respiratory quinone was ubiquinone-8 (Q-8). Its DNA G+C content was 70.6â% (data from the genome sequence) and the estimated genome size was 3.860 Mb. The average nucleotide identity values between the FT117T genome and the genomes of Z. arvi CC-CFT501T, Q. transsilvanicum JCM 31785T, L. mirabilis CCUG 34794T and Paraburkholderia strydomiana LMG 31012T were 85.4â%, 76.4â%, 73.0â% and 71.3â%, and the digital DNA-DNA hybridization values were 29.1â%, 21.0â%, 20.3â% and 19.1â%, respectively. The phylogenetic, phenotypic and chemotaxonomic differences between FT117T and its phylogenetic relatives indicate that FT117T should be regarded as representing a novel species within the genus Zeimonas, for which the name Zeimonas sediminis sp. nov. is proposed. The type strain is FT117T (=KCTC 92314T = MCCC 1K07396T).
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Base de dados:
MEDLINE
Assunto principal:
Fosfolipídeos
/
Ácidos Graxos
País/Região como assunto:
Asia
Idioma:
En
Revista:
Int J Syst Evol Microbiol
Assunto da revista:
MICROBIOLOGIA
Ano de publicação:
2023
Tipo de documento:
Article