Long-read sequencing for reliably calling the <i>mompS</i> allele in <i>Legionella pneumophila</i> sequence-based typing.

Krøvel, Anne Vatland; Hetland, Marit A K; Bernhoff, Eva; Bjørheim, Anna Steensen; Soma, Markus André; Löhr, Iren H

Long-read sequencing for reliably calling the mompS allele in Legionella pneumophila sequence-based typing.

Krøvel, Anne Vatland; Hetland, Marit A K; Bernhoff, Eva; Bjørheim, Anna Steensen; Soma, Markus André; Löhr, Iren H.

Afiliação

Krøvel AV; Department of Medical Microbiology, Stavanger University Hospital, Stavanger, Norway.
Hetland MAK; National Reference Laboratory for Legionella, Stavanger University Hospital, Stavanger, Norway.
Bernhoff E; Department of Medical Microbiology, Stavanger University Hospital, Stavanger, Norway.
Bjørheim AS; Department of Biological Sciences, Faculty of Mathematics and Natural Sciences, University of Bergen, Bergen, Norway.
Soma MA; Department of Medical Microbiology, Stavanger University Hospital, Stavanger, Norway.
Löhr IH; National Reference Laboratory for Legionella, Stavanger University Hospital, Stavanger, Norway.

Front Cell Infect Microbiol ; 13: 1176182, 2023.

Article em En | MEDLINE | ID: mdl-37256104

Assuntos

Legionella pneumophila; Doença dos Legionários; Humanos; Legionella pneumophila/genética; Alelos; Análise de Sequência de DNA/métodos; Sequenciamento de Nucleotídeos em Larga Escala/métodos

Palavras-chave

Illumina; Legionella pneumophila SBT; ONT; WGS; long-reads; mompS; short-reads

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Texto completo: 1 Base de dados: MEDLINE Assunto principal: Doença dos Legionários / Legionella pneumophila Limite: Humans Idioma: En Revista: Front Cell Infect Microbiol Ano de publicação: 2023 Tipo de documento: Article País de afiliação: Noruega

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