A tool to assess the mock community samples in 16S rRNA gene-based microbiota profiling studies.
Microbiome Res Rep
; 2(2): 14, 2023.
Article
em En
| MEDLINE
| ID: mdl-38047277
ABSTRACT
Inclusion and investigation of technical controls in microbiome sequencing studies is important for understanding technical biases and errors. Here, we present chkMocks, a general R-based tool that allows researchers to compare the composition of mock communities that are processed along with samples to their theoretical composition. A visual comparison between experimental and theoretical community composition and their correlation is provided for researchers to assess the quality of their sample processing workflows.
Texto completo:
1
Base de dados:
MEDLINE
Idioma:
En
Revista:
Microbiome Res Rep
Ano de publicação:
2023
Tipo de documento:
Article
País de afiliação:
Holanda