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Machine learning-based longitudinal prediction for GJB2-related sensorineural hearing loss.
Chen, Pey-Yu; Yang, Ta-Wei; Tseng, Yi-Shan; Tsai, Cheng-Yu; Yeh, Chiung-Szu; Lee, Yen-Hui; Lin, Pei-Hsuan; Lin, Ting-Chun; Wu, Yu-Jen; Yang, Ting-Hua; Chiang, Yu-Ting; Hsu, Jacob Shu-Jui; Hsu, Chuan-Jen; Chen, Pei-Lung; Chou, Chen-Fu; Wu, Chen-Chi.
Afiliação
  • Chen PY; Department of Otolaryngology, MacKay Memorial Hospital, Taipei, Taiwan; Department of Audiology and Speech-Language Pathology, Mackay Medical College, New Taipei City, Taiwan; Department of Otolaryngology, National Taiwan University Hospital, Taipei, Taiwan.
  • Yang TW; Graduate Institute of Networking and Multimedia, National Taiwan University, Taipei, Taiwan.
  • Tseng YS; Department of Computer Science & Information Engineering, National Taiwan University, Taipei, Taiwan.
  • Tsai CY; Department of Otolaryngology, National Taiwan University Hospital, Taipei, Taiwan; Graduate Institute of Medical Genomics and Proteomics, National Taiwan University College of Medicine, Taipei, Taiwan.
  • Yeh CS; Department of Computer Science & Information Engineering, National Taiwan University, Taipei, Taiwan.
  • Lee YH; Department of Otolaryngology, National Taiwan University Biomedical Park Hospital, Hsinchu County, Taiwan; Department of Otolaryngology, National Taiwan University Hospital Hsin-Chu Branch, Hsinchu City, Taiwan; Hearing and Speech Center, National Taiwan University Hospital, Taipei, Taiwan.
  • Lin PH; Department of Otolaryngology, National Taiwan University Hospital, Taipei, Taiwan; Graduate Institute of Clinical Medicine, College of Medicine, National Taiwan University, Taipei, Taiwan.
  • Lin TC; Department of Computer Science & Information Engineering, National Taiwan University, Taipei, Taiwan.
  • Wu YJ; Department of Computer Science & Information Engineering, National Taiwan University, Taipei, Taiwan.
  • Yang TH; Department of Otolaryngology, National Taiwan University Hospital, Taipei, Taiwan.
  • Chiang YT; Department of Otolaryngology, National Taiwan University Hospital, Taipei, Taiwan; Graduate Institute of Medical Genomics and Proteomics, National Taiwan University College of Medicine, Taipei, Taiwan.
  • Hsu JS; Graduate Institute of Medical Genomics and Proteomics, National Taiwan University College of Medicine, Taipei, Taiwan.
  • Hsu CJ; Department of Otolaryngology, National Taiwan University Hospital, Taipei, Taiwan; Department of Otorhinolaryngology-Head and Neck Surgery, Taichung Tzu Chi Hospital, Buddhist Tzu Chi Medical Foundation, Taichung, Taiwan; School of Medicine, Tzu Chi University, Hualien, Taiwan.
  • Chen PL; Graduate Institute of Medical Genomics and Proteomics, National Taiwan University College of Medicine, Taipei, Taiwan; Department of Medical Genetics, National Taiwan University Hospital, Taipei, Taiwan.
  • Chou CF; Department of Computer Science & Information Engineering, National Taiwan University, Taipei, Taiwan.
  • Wu CC; Department of Otolaryngology, National Taiwan University Hospital, Taipei, Taiwan; Department of Medical Genetics, National Taiwan University Hospital, Taipei, Taiwan; Department of Medical Research, National Taiwan University Hospital Hsin-Chu Branch, Hsin-Chu, Taiwan. Electronic address: chenchiwu
Comput Biol Med ; 176: 108597, 2024 Jun.
Article em En | MEDLINE | ID: mdl-38763069
ABSTRACT

BACKGROUND:

Recessive GJB2 variants, the most common genetic cause of hearing loss, may contribute to progressive sensorineural hearing loss (SNHL). The aim of this study is to build a realistic predictive model for GJB2-related SNHL using machine learning to enable personalized medical planning for timely intervention.

METHOD:

Patients with SNHL with confirmed biallelic GJB2 variants in a nationwide cohort between 2005 and 2022 were included. Different data preprocessing protocols and computational algorithms were combined to construct a prediction model. We randomly divided the dataset into training, validation, and test sets at a ratio of 72820, and repeated this process ten times to obtain an average result. The performance of the models was evaluated using the mean absolute error (MAE), which refers to the discrepancy between the predicted and actual hearing thresholds.

RESULTS:

We enrolled 449 patients with 2184 audiograms available for deep learning analysis. SNHL progression was identified in all models and was independent of age, sex, and genotype. The average hearing progression rate was 0.61 dB HL per year. The best MAE for linear regression, multilayer perceptron, long short-term memory, and attention model were 4.42, 4.38, 4.34, and 4.76 dB HL, respectively. The long short-term memory model performed best with an average MAE of 4.34 dB HL and acceptable accuracy for up to 4 years.

CONCLUSIONS:

We have developed a prognostic model that uses machine learning to approximate realistic hearing progression in GJB2-related SNHL, allowing for the design of individualized medical plans, such as recommending the optimal follow-up interval for this population.
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Texto completo: 1 Base de dados: MEDLINE Assunto principal: Aprendizado de Máquina / Conexina 26 / Perda Auditiva Neurossensorial Limite: Adolescent / Adult / Child / Child, preschool / Female / Humans / Male / Middle aged Idioma: En Revista: Comput Biol Med Ano de publicação: 2024 Tipo de documento: Article País de afiliação: Taiwan

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Aprendizado de Máquina / Conexina 26 / Perda Auditiva Neurossensorial Limite: Adolescent / Adult / Child / Child, preschool / Female / Humans / Male / Middle aged Idioma: En Revista: Comput Biol Med Ano de publicação: 2024 Tipo de documento: Article País de afiliação: Taiwan