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1.
J Phys Chem A ; 128(4): 747-760, 2024 Feb 01.
Artigo em Inglês | MEDLINE | ID: mdl-38232326

RESUMO

Modifying the optical and electronic properties of crystalline organic thin films is of great interest for improving the performance of modern organic semiconductor devices. Therein, the statistical mixing of molecules to form a solid solution provides an opportunity to fine-tune optical and electronic properties. Unfortunately, the diversity of intermolecular interactions renders mixed organic crystals highly complex, and a holistic picture is still lacking. Here, we report a study of the optical absorption properties in solid solutions of pentacene and tetracene, two prototypical organic semiconductors. In the mixtures, the optical properties can be continuously modified by statistical mixing at the molecular level. Comparison with time-dependent density functional theory calculations on occupationally disordered clusters unravels the electronic origin of the low energy optical transitions. The disorder partially relaxes the selection rules, leading to additional optical transitions that manifest as optical broadening. Furthermore, the contribution of diabatic charge-transfer states is modified in the mixtures, reducing the observed splitting in the 0-0 vibronic transition. Additional comparisons with other blended systems generalize our results and indicate that changes in the polarizability of the molecular environment in organic thin-film blends induce shifts in the absorption spectrum.

2.
Molecules ; 29(11)2024 Jun 04.
Artigo em Inglês | MEDLINE | ID: mdl-38893535

RESUMO

The aim of this study was to investigate the transition from non-covalent reversible over covalent reversible to covalent irreversible inhibition of cysteine proteases by making delicate structural changes to the warhead scaffold. To this end, dipeptidic rhodesain inhibitors with different N-terminal electrophilic arenes as warheads relying on the SNAr mechanism were synthesized and investigated. Strong structure-activity relationships of the inhibition potency, the degree of covalency, and the reversibility of binding on the arene substitution pattern were found. The studies were complemented and substantiated by molecular docking and quantum-mechanical calculations of model systems. Furthermore, the improvement in the membrane permeability of peptide esters in comparison to their corresponding carboxylic acids was exemplified.


Assuntos
Cisteína Proteases , Inibidores de Cisteína Proteinase , Simulação de Acoplamento Molecular , Inibidores de Cisteína Proteinase/química , Inibidores de Cisteína Proteinase/farmacologia , Inibidores de Cisteína Proteinase/metabolismo , Relação Estrutura-Atividade , Cisteína Proteases/metabolismo , Cisteína Proteases/química , Cisteína Endopeptidases/metabolismo , Cisteína Endopeptidases/química , Estrutura Molecular
3.
Angew Chem Int Ed Engl ; 63(18): e202401052, 2024 Apr 24.
Artigo em Inglês | MEDLINE | ID: mdl-38415886

RESUMO

Radicals of the lightest group 13 element, boron, are well established and observed in numerous forms. In contrast to boron, radical chemistry involving the heavier group 13 elements (aluminum, gallium, indium, and thallium) remains largely underexplored, primarily attributed to the formidable synthetic challenges associated with these elements. Herein, we report the synthesis and isolation of planar and twisted conformers of a doubly CAAC (cyclic alkyl(amino)carbene)-radical-substituted dialane. Extensive characterization through spectroscopic analyses and X-ray crystallography confirms their identity, while quantum chemical calculations support their open-shell nature and provide further insights into their electronic structures. The dialane-connected diradicals exhibit high susceptibility to oxidation, as evidenced by electrochemical measurements and reactions with o-chloranil and a variety of organic azides. This study opens a previously uncharted class of dialuminum systems to study, broadening the scope of diradical chemistry and its potential applications.

4.
J Am Chem Soc ; 145(40): 22222-22231, 2023 Oct 11.
Artigo em Inglês | MEDLINE | ID: mdl-37782897

RESUMO

A cyclic alkyl(amino)carbene (CAAC)-stabilized 1,4-diborabenzene (DBB, 1) reacts with the group 10 precursor [Ni(CO)4] to yield the DBB pogo-stick complex [(η6-DBB)Ni(CO)] (2) as a dark-green crystalline solid. The IR-spectroscopic and X-ray crystallographic data of 2 highlight the strong π-donor properties of the DBB ligand. The reaction of 1 with [M(nbe)2] (M = Pd, Pt; nbe = norbornene) yields the unique zerovalent heavier group 10 arene pogo-stick complexes [(η6-DBB)M(nbe)] (3-M), isolated as dark-purple and black crystalline solids, respectively. 3-Pd and 3-Pt show strong near-IR (NIR) absorptions at 835 and 904 nm, respectively. Time-dependent density functional theory (TD-DFT) calculations show that these result from the S0→S1 excitation, which corresponds to a transfer of electron density from a metal d orbital aligned with the z direction (dxz or dyz) to a d orbital located in the xy plane (dxy or dx2-y2), with the redshift for 3-Pt resulting from the higher spin-orbit coupling (SOC). In complex 2, electron donation from the nickel center into the carbonyl 2π* orbital destabilizes the DBB···Ni interaction, resulting in an absorption at a higher energy. Complexes 2 and 3-M react with [Fe(CO)5] to yield the doubly CO-bridged M(0)→Fe(0) (M = Ni, Pd, Pt) metal-only Lewis pairs (MOLPs) 4-M as black (M = Ni, Pt) and dark-turquoise (M = Pd) crystalline solids. Furthermore, 3-Pt undergoes oxidative Sn-H addition with Ph3SnH to yield the corresponding Pt(II) stannyl hydride, [(η6-DBB)PtH(SnPh3)] (5).

5.
J Comput Chem ; 44(3): 456-467, 2023 Jan 30.
Artigo em Inglês | MEDLINE | ID: mdl-36054757

RESUMO

The development of ligands capable of effectively stabilizing highly reactive main-group species has led to the experimental realization of a variety of systems with fascinating properties. In this work, we computationally investigate the electronic, structural, energetic, and bonding features of proximity-enforced group 13-15 homodimers stabilized by a rigid expanded pincer ligand based on the 1,8-naphthyridine (napy) core. We show that the redox-active naphthyridine diimine (NDI) ligand enables a wide variety of structural motifs and element-element interaction modes, the latter ranging from isolated, element-centered lone pairs (e.g., E = Si, Ge) to cases where through-space π bonds (E = Pb), element-element multiple bonds (E = P, As) and biradical ground states (E = N) are observed. Our results hint at the feasibility of NDI-E2 species as viable synthetic targets, highlighting the versatility and potential applications of napy-based ligands in main-group chemistry.

6.
Phys Chem Chem Phys ; 25(41): 28428-28436, 2023 Oct 25.
Artigo em Inglês | MEDLINE | ID: mdl-37843851

RESUMO

The efficient population of the triplet excited states in heavy metal-free organic chromophores has been one of the long-standing research problems to molecular photochemists. The negligible spin-orbit coupling matrix elements in the purely organic chromophores and the large singlet-triplet energy gap (ΔES-T) pose a hurdle for ultrafast intersystem crossing (ISC). Herein we report the unprecedented population of triplet manifold in a series of nitrogen-annulated perylene bisimide chromophores (NPBI and Br-NPBI). NPBI is found to have a moderate fluorescence quantum yield (Φf = 68 ± 5%), whereas Br-NPBI showcased a low fluorescence quantum yield (Φf = 2.0 ± 0.6%) in toluene. The femtosecond transient absorption measurements of Br-NPBI revealed ultrafast ISC (kISC = 1.97 × 1010 s-1) from the initially populated singlet excited state to the long-lived triplet excited states. The triplet quantum yields (ΦT = 95.2 ± 4.6% for Br-NPBI, ΦT = 18.7 ± 2.3% for NPBI) calculated from nanosecond transient absorption spectroscopy measurements showed the enhancement in triplet population upon bromine substitution. The quantum chemical calculations revealed the explicit role of nitrogen annulation in tuning the excited state energy levels to favor the ISC. The near degeneracy between the singlet and triplet excited states observed in NPBI and Br-NPBI (ΔES-T = -0.01 eV for NPBI, ΔES-T = 0.03 eV for Br-NPBI) facilitates the spin flipping in the molecules. Nitrogen annulation emerges as a design strategy to open up the ISC pathway and the rate of which can be further enhanced by the substitution of a heavier element.

7.
Int J Mol Sci ; 24(8)2023 Apr 13.
Artigo em Inglês | MEDLINE | ID: mdl-37108388

RESUMO

Covalent peptidomimetic protease inhibitors have gained a lot of attention in drug development in recent years. They are designed to covalently bind the catalytically active amino acids through electrophilic groups called warheads. Covalent inhibition has an advantage in terms of pharmacodynamic properties but can also bear toxicity risks due to non-selective off-target protein binding. Therefore, the right combination of a reactive warhead with a well-suited peptidomimetic sequence is of great importance. Herein, the selectivities of well-known warheads combined with peptidomimetic sequences suited for five different proteases were investigated, highlighting the impact of both structure parts (warhead and peptidomimetic sequence) for affinity and selectivity. Molecular docking gave insights into the predicted binding modes of the inhibitors inside the binding pockets of the different enzymes. Moreover, the warheads were investigated by NMR and LC-MS reactivity assays against serine/threonine and cysteine nucleophile models, as well as by quantum mechanics simulations.


Assuntos
Peptidomiméticos , Inibidores de Proteases , Inibidores de Proteases/farmacologia , Inibidores de Proteases/química , Peptidomiméticos/farmacologia , Simulação de Acoplamento Molecular , Aminoácidos/química , Cisteína/metabolismo
8.
Chemistry ; 28(49): e202201398, 2022 Sep 01.
Artigo em Inglês | MEDLINE | ID: mdl-35652449

RESUMO

The reaction of a cyclic alkyl(amino)carbene (CAAC)-stabilized thiazaborolo[5,4-d]thiazaborole (TzbTzb) with strong Brønsted acids, such as HCl, HOTf (Tf=O2 SCF3 ) and [H(OEt2 )2 ][BArF 4 ] (ArF =3,5-(CF3 )2 C6 H3 ), results in the protonation of both TzbTzb nitrogen atoms. In each case X-ray crystallographic data show coordination of the counteranions (Cl- , OTf- , BArF 4 - ) or solvent molecules (OEt2 ) to the doubly protonated fused heterocycle via hydrogen-bonding interactions, the strength of which strongly influences the 1 H NMR shift of the NH protons, enabling tuning of both the visible (yellow to red) and fluorescence (green to red) colors of these salts. DFT calculations reveal that the hydrogen bonding of the counteranion or solvent to the protonated nitrogen centers affects the intramolecular TzbTzb-to-CAAC charge transfer character involved in the S0 →S1 transition, ultimately enabling fine-tuning of their absorption and emission spectral features.


Assuntos
Boro , Prótons , Ânions/química , Ligação de Hidrogênio , Nitrogênio , Solventes
9.
J Chem Phys ; 156(5): 054303, 2022 Feb 07.
Artigo em Inglês | MEDLINE | ID: mdl-35135254

RESUMO

We investigate the quantum and classical wave packet dynamics in an harmonic oscillator that is perturbed by a disorder potential. This perturbation causes the dispersion of a Gaussian wave packet, which is reflected in the coordinate-space and the momentum-space Shannon entropies, the latter being a measure for the amount of information available on a system. Regarding the sum of the two quantities, one arrives at an entropy that is related to the coordinate-momentum uncertainty. Whereas in the harmonic case, this entropy is strictly periodic and can be evaluated analytically, this behavior is lost if disorder is added. There, at selected times, the quantum mechanical probability density resembles that of a classical oscillator distribution function, and the entropy assumes larger values. However, at later times and dependent on the degree of disorder and the chosen initial conditions, quantum mechanical revivals occur. Then, the observed effects are reversed, and the entropy may decrease close to its initial value. This effect cannot be found classically.

10.
J Chem Phys ; 156(4): 044304, 2022 Jan 28.
Artigo em Inglês | MEDLINE | ID: mdl-35105089

RESUMO

A novel trimeric perylenediimide (PDI) macrocycle was synthesized, and its intramolecular electronic couplings were investigated by bulk and single-molecule optical spectroscopy and by various theoretical approaches. In polarization-resolved excitation spectroscopy at 1.2 K in a PMMA matrix, the appearance and disappearance of the three zero-phonon lines (ZPLs) of an individual trimer by changing the polarization in steps of 60° nicely reflect an approximate triangular geometry of the macrocycle and indicate localized excitations that are transferred by incoherent hopping processes at time scales of around 1 ps as inferred from the ZPL linewidths. The electronic coupling strength deduced from the low temperature data is found to be in good agreement with theoretical estimates. Bulk spectroscopy in toluene at room temperature indicates that the excitations are also localized under these conditions. Theory reveals that the reasons for the localized nature of the excitations at room and low temperatures are different. For a rigid macrocycle, the excitations are predicted to be delocalized, but molecular dynamics simulations point to considerable structural flexibility at ambient temperatures, which counteracts excitation delocalization. At 1.2 K in a PMMA matrix, this effect is too small to lead to localization. Yet, supported by simple model calculations, the disorder in the PMMA host induces sufficient differences between the PDI chromophores, which again result in localized excitations. By addressing crucial aspects of excitation energy transfer, our combined approach provides a detailed and quantitative account of the interchromophore communication in a trimeric macrocycle.

11.
J Am Chem Soc ; 143(10): 3687-3692, 2021 Mar 17.
Artigo em Inglês | MEDLINE | ID: mdl-33651600

RESUMO

Herein we report the synthesis and characterization of anionic boron- and carbon-based Kekulé diradicaloids spanned by a p-phenylene bridge. In contrast to Thiele's hydrocarbon, a closed-shell singlet system, they show an appreciable population of the triplet state at room temperature, as evidenced by both NMR and EPR spectroscopy. Moreover, en route to these anionic boron- and carbon-based hetero-diradicaloids, the formation of an isolable diamino(4-diarylboryl-phenyl)methyl radical was observed.

12.
Chemistry ; 27(16): 5056, 2021 Mar 17.
Artigo em Inglês | MEDLINE | ID: mdl-33480456

RESUMO

Invited for the cover of this issue is Bernd Engels, Holger Braunschweig, Volker Engel and their coworkers at University of Würzburg. The image depicts bridged boron compounds which possess fascinating relationships between their composition and their geometrical and electronic structures, the latter ranging from closed-shell to biradical triplet or singlet ground state. Read the full text of the article at 10.1002/chem.202004619.

13.
Chemistry ; 27(47): 12126-12136, 2021 Aug 19.
Artigo em Inglês | MEDLINE | ID: mdl-34114702

RESUMO

The development of complexes featuring low-valent, multiply bonded metal centers is an exciting field with several potential applications. In this work, we describe the design principles and extensive computational investigation of new organometallic platforms featuring the elusive manganese-manganese bond stabilized by experimentally realized N-heterocyclic carbenes (NHCs). By using DFT computations benchmarked against multireference calculations, as well as MO- and VB-based bonding analyses, we could disentangle the various electronic and structural effects contributing to the thermodynamic and kinetic stability, as well as the experimental feasibility, of the systems. In particular, we explored the nature of the metal-carbene interaction and the role of the ancillary η6 coordination to the generation of Mn2 systems featuring ultrashort metal-metal bonds, closed-shell singlet multiplicities, and positive adiabatic singlet-triplet gaps. Our analysis identifies two distinct classes of viable synthetic targets, whose electrostructural properties are thoroughly investigated.

14.
Chemistry ; 27(16): 5160-5170, 2021 Mar 17.
Artigo em Inglês | MEDLINE | ID: mdl-33225473

RESUMO

Twisted boron-based biradicals featuring unsaturated C2 R2 (R=Et, Me) bridges and stabilization by cyclic (alkyl)(amino)carbenes (CAACs) were recently prepared. These species show remarkable geometrical and electronic differences with respect to their unbridged counterparts. Herein, a thorough computational investigation on the origin of their distinct electrostructural properties is performed. It is shown that steric effects are mostly responsible for the preference for twisted over planar structures. The ground-state multiplicity of the twisted structure is modulated by the σ framework of the bridge, and different R groups lead to distinct multiplicities. In line with the experimental data, a planar structure driven by delocalization effects is observed as global minimum for R=H. The synthetic elusiveness of C2 R2 -bridged systems featuring N-heterocyclic carbenes (NHCs) was also investigated. These results could contribute to the engineering of novel main group biradicals.

15.
Chemistry ; 27(10): 3407-3419, 2021 Feb 15.
Artigo em Inglês | MEDLINE | ID: mdl-33090581

RESUMO

The crystal interaction density is generally assumed to be a suitable measure of the polarization of a low-molecular weight ligand inside an enzyme, but this approximation has seldomly been tested and has never been quantified before. In this study, we compare the crystal interaction density and the interaction electrostatic potential for a model compound of loxistatin acid (E64c) with those inside cathepsin B, in solution, and in vacuum. We apply QM/MM calculations and experimental quantum crystallography to show that the crystal interaction density is indeed very similar to the enzyme interaction density. Less than 0.1 e are shifted between these two environments in total. However, this difference has non-negligible consequences for derived properties.


Assuntos
Elétrons , Ligantes , Preparações Farmacêuticas , Eletricidade Estática
16.
J Chem Phys ; 154(11): 114302, 2021 Mar 21.
Artigo em Inglês | MEDLINE | ID: mdl-33752348

RESUMO

We report a study on the fragmentation of core-ionized and core-excited isocyanic acid, HNCO, using Auger-electron/photoion coincidence spectroscopy. Site-selectivity is observed both for normal and resonant Auger electron decay. Oxygen 1s ionization leads to the CO+ + NH+ ion pairs, while nitrogen 1s ionization results in three-body dissociation and an efficient fragmentation of the H-N bond in the dication. Upon 1s → 10a' resonant excitation, clear differences between O and N sites are discernible as well. In both cases, the correlation between the dissociation channel and the binding energy of the normal Auger electrons indicates that the fragmentation pattern is governed by the excess energy available in the final ionic state. High-level multireference calculations suggest pathways to the formation of the fragment ions NO+ and HCO+, which are observed although the parent compound contains neither N-O nor H-C bonds. This work contributes to the goal to achieve and understand site-selective fragmentation upon ionization and excitation of molecules with soft x-ray radiation.

17.
Angew Chem Int Ed Engl ; 60(46): 24388-24394, 2021 Nov 08.
Artigo em Inglês | MEDLINE | ID: mdl-34378855

RESUMO

The isolation of simple, fundamentally important, and highly reactive organometallic compounds remains among the most challenging tasks in synthetic chemistry. The detailed characterization of such compounds is key to the discovery of novel bonding scenarios and reactivity. The dimethylbismuth cation, [BiMe2 (SbF6 )] (1), has been isolated and characterized. Its reaction with BiMe3 gives access to an unprecedented dative bond, a Bi→Bi donor-acceptor interaction. The exchange of methyl groups (arguably the simplest hydrocarbon moiety) between different metal atoms is among the most principal types of reactions in organometallic chemistry. The reaction of 1 with BiMe3 enables an SE 2(back)-type methyl exchange, which is, for the first time, investigated in detail for isolable, (pseudo-)homoleptic main-group compounds.

18.
Angew Chem Int Ed Engl ; 60(24): 13661-13665, 2021 Jun 07.
Artigo em Inglês | MEDLINE | ID: mdl-33844394

RESUMO

The NHC-stabilised diboryne (B2 (SIDep)2 ; SIDep=1,3-bis(2,6-diethylphenyl)imidazolin-2-ylidene) undergoes a high-yielding P-P bond activation with tetraethyldiphosphine at room temperature to form a B2 P2 heterocycle via a diphosphoryldiborene by 1,2-diphosphination. The heterocycle can be oxidised to a radical cation and a dication, respectively, depending on the oxidant used and its counterion. Starting from the planar, neutral 1,3-bis(alkylidene)-1,3-diborata-2,4-diphosphoniocyclobutane, each oxidation step leads to decreased B-B distances and loss of planarity by cationisation. X-ray analyses in conjunction with DFT and CASSCF/NEVPT2 calculations reveal closed-shell singlet, butterfly-shaped structures for the NHC-stabilised dicationic B2 P2 rings, with their diradicaloid, planar-ring isomers lying close in energy.

19.
Angew Chem Int Ed Engl ; 60(7): 3812-3819, 2021 Feb 15.
Artigo em Inglês | MEDLINE | ID: mdl-33210400

RESUMO

The concepts of aromaticity and antiaromaticity have a long history, and countless demonstrations of these phenomena have been made with molecules based on elements from the p, d, and f blocks of the periodic table. In contrast, the limited oxidation-state flexibility of the s-block metals has long stood in the way of their participation in sophisticated π-bonding arrangements, and truly antiaromatic systems containing s-block metals are altogether absent or remain poorly defined. Using spectroscopic, structural, and computational techniques, we present herein the synthesis and authentication of a heterocyclic compound containing the alkaline earth metal beryllium that exhibits significant antiaromaticity, and detail its chemical reduction and Lewis-base-coordination chemistry.

20.
Angew Chem Int Ed Engl ; 60(6): 2963-2968, 2021 Feb 08.
Artigo em Inglês | MEDLINE | ID: mdl-33191596

RESUMO

The one-electron reduction of a cyclic (alkyl)(amino)carbene (CAAC)-stabilized arylborylene carbonyl complex yields a dimeric borylketyl radical anion, resulting from an intramolecular aryl migration to the CO carbon atom. Computational analyses support the existence of a [(CAAC)B(CO)Ar].- radical anion intermediate. Further reduction leads to a highly nucleophilic dianionic (boraneylidene)methanolate.

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