Genetic analysis of milk citrate predicted by milk mid-infrared spectra of Holstein cows in early lactation.

Milk citrate is regarded as an early biomarker of negative energy balance in dairy cows during early lactation and serves as a suitable candidate phenotype for genomic selection due to its wide availability across a large number of cows through milk mid-infrared spectra prediction. However, its genetic background is not well known. Therefore, the objectives of this study were to (1) analyze the genetic parameters of milk citrate; (2) identify genomic regions associated with milk citrate; and (3) analyze the functional annotation of candidate genes and quantitative trait loci (QTL) related to milk citrate in Walloon Holstein cows. In total, 134,517 test-day milk-citrate phenotypes (mmol/L) collected within the first 50 d in milk on 52,198 Holstein cows were used. These milk-citrate phenotypes, predicted by milk mid-infrared spectra, were divided into 3 traits according to the first (citrate1), second (citrate2), and third to fifth parity (citrate3+). Genomic information for 566,170 SNPs was available for 4,479 animals. A multiple-trait repeatability model was used to estimate genetic parameters. A single-step GWAS was used to identify candidate genes for citrate and post-GWAS analysis was done to investigate the relationship and function of the identified candidate genes. The heritabilities estimated for citrate1, citrate2, and citrate3+ were 0.40, 0.37, and 0.35, respectively. The genetic correlations among the 3 traits ranged from 0.98 to 0.99. The genomic correlations among the 3 traits were also close to 1.00 across the genomic regions (1 Mb) in the whole genome, which means that citrate can be considered as a single trait in the first 5 parities. In total, 603 significant SNPs located on 3 genomic regions (chromosome 7, 68.569-68.575 Mb; chromosome 14, 0.15-1.90 Mb; and chromosome 20, 54.00-64.28 Mb), were identified to be associated with milk citrate. We identified 89 candidate genes including GPT, ANKH, PPP1R16A, and 32 QTL reported in the literature related to the identified significant SNPs. These identified QTL were mainly reported associated with milk fatty acids and metabolic diseases in dairy cows. This study suggests that milk citrate in Holstein cows is highly heritable and has the potential to be used as an early proxy for the negative energy balance of Holstein cows in a breeding objective.

Effect of phosphorus fertilizer on phytoextraction using Ricinus communis L. in Cu and Cd co-contaminated soil.

Mining activities have led to Cu and Cd contaminated of surrounding agricultural soil. To decrease the Cu and Cd accumulation in crops, the Ricinus communis L. (castor) has been used for phytoremediation. A pot experiment was served to investigate the effect of phosphate fertilizer (Ca(H2PO4)2) on the growth and Cu/Cd uptake of castor in contaminated soil. The results showed that the application of P fertilizer improved the leaf cell morphology, decreased the malonaldehyde (MDA) content of castor leaves, and increased the plant biomass (28.2-34.2%). Besides, phosphate fertilizer still facilitated accumulation Cu and Cd by castor. The addition of phosphate fertilizer increased the contents of Cu in the root of castor, improved the bioconcentration factor (BCF) of Cu, and observably enhanced the accumulation of Cu (up to 201 µg/plant) in castor. Applying phosphorus increased the percentage of residual Cd, diminished the percentage of acid extractable Cd in soil, and the accumulation of Cd in castor was not significantly increased. These results suggest that phosphorus alleviated the stress of heavy metals on castor leaves and enhanced the accumulation of Cu and Cd in castor by promoting the growth of castor.

Applying phosphate fertilizer effectively alleviated the stress of heavy metals on castor and significantly increased the biomass of castor.The reason of applying phosphorus enhanced the castor uptake Cu and Cd was that phosphorus promoted the growth of castor.Applying phosphorus markedly increased the percentage of residual Cd but diminished the percentage of acid extractable Cd in soil.

Influence mechanisms of iron, aluminum and manganese oxides on the mineralization of organic matter in paddy soil.

The mineralization of soil organic matter (SOM) is closely related to the emission of greenhouse gas into atmosphere and the stability of organic carbon in soil. The influence of minerals on SOM mineralization in the specific soil received very few attentions. The influence characteristics and potential mechanisms of oxides on the mineralization of SOM in the paddy soil were observed in this study by incubating soil with the addition (dosage: 10 g kg-1) of prepared gibbsite, goethite, ferrihydrite or birnessite for 60 days. A sequence control treatment (753 mg CO2-C kg-1) > goethite treatment (656 mg CO2-C kg-1) ≈ gibbsite treatment (649 mg CO2-C kg-1) > birnessite treatment (529 mg CO2-C kg-1) > ferrihydrite treatment (441 mg CO2-C kg -1) was found in the cumulative amount of released CO2 in 60 days of incubation. Oxides especially ferrihydrite significantly decreased the content of dissolved organic matter (DOM) but tended to increase the content of microbial biomass carbon (MBC). The molecular structure of DOM in the paddy soil was simplified by gibbsite, ferrihydrite and birnessite after the incubation. Oxides especially birnessite and ferrihydrite reduced soil pH and the content of soil available N but increased soil redox potential (Eh). All examined oxides especially Fe oxides enhanced soil bacterial abundance but only birnessite significantly affected bacterial composition at phyla level. The stimulation on the immobilization and/or microbial assimilation of labile organic carbon, the modulation on soil basic properties (available N, pH, Eh), and the decrease of the relative abundance of some decomposing bacteria phyla such as Actinobacteria were the potential pathways of oxides in decreasing SOM mineralization.

Effects of low molecular weight organic acids on Cu accumulation by castor bean and soil enzyme activities.

Chelating agents have been considered as an important phytoremediation strategy to enhance heavy metal extraction from contaminated soil. A pot experiment was conducted to explore the effects of low molecular weight organic acids (LMWOAs) on the phytoremediation efficiency of copper (Cu) by castor bean, and soil enzyme activities. Results indicated that the addition of all the three kinds of LMWOAs (citric, tartaric, oxalic acids) did not decrease the biomass of castor bean, despite the fact they reduced the concentration of chlorophyll-a in leaves compared to the control. The Cu concentrations in the roots and shoots significantly increased by 6-106% and 5-148%, respectively, in the LMWOAs treatments so that the total accumulation of Cu by whole plants in all the LMWOAs treatments increased by 21-189% in comparison with the control. The values of the translocation factor (TF) and bio-concentration factor (BCF) of Cu in castor bean also rose following the addition of LMWOAs, indicating that the LMWOAs enhanced the uptake and transportation of Cu. Moreover, the application of LMWOAs did not significantly change the soil pH but significantly increased the activity of soil enzymes (urease, catalase, and alkaline phosphatase). The addition of exogenous LMWOAs increased the available Cu significantly in the soil, thus promoted the phytoextraction efficiency of Cu by castor bean. These results will provide some new insights into the practical use of LMWOAs for the phytoremediation of heavy-metal-contaminated soil employing castor bean.

Effect of rice straw, biochar and calcite on maize plant and Ni bio-availability in acidic Ni contaminated soil.

Metals that contaminate soil is one of the major problems seriously affecting sustainable agriculture worldwide. Nickel (Ni) toxicity to agricultural crops is a global problem. Mobility of heavy metals present in contaminated soil can be reduced by the amendment of soil passivators, which will ultimately reduce the risk of them entering the food chain. A greenhouse pot experiment was conducted to investigate the effects of rice straw (RS), biochar derived from rice straw (BI) and calcium carbonate (calcite) on Ni mobility and its up take by maize (Zea maize L.) plant. Maize crop was grown in Ni spiked (100 mg kg-1) soil with three application rates of passivators (equivalent to 0, 1and 2% of each RS, BI and calcite) applied separately to the soil. Results revealed that the post-harvest soil properties (pH, DOC and MBC), plant phenology (plant height, root length, total dry weight) and physiological characteristics were significantly enhanced with passivator application. Additionally, incorporating passivator into the soil reduced Ni mobility (DTPA) by 68%, 88.9% and 79.3%, and leachability (TCLP) by 72.4%, 76.7% and 66.7% for RS, BI and calcite, respectively at 2% application rate. The Ni concentration in the maize shoots reduced by 30%, 95.2% and 95% and in the roots by 56%, 66% and 63.8% with RS, BI and calcite at 2% application rate, respectively. These findings suggest that the application of 2% biochar (BI) is very promising in reducing Ni uptake, and can reduce toxicity to plants, decrease mobility and leachability in the soil.

Role of sepiolite for cadmium (Cd) polluted soil restoration and spinach growth in wastewater irrigated agricultural soil.

Metals that contaminate soil are one of the major problems seriously affecting sustainable agriculture worldwide. Cadmium (Cd) toxicity to agricultural crops is a global problem. Mobility of Cd in contaminated soil can be minimized by the amendment of soil passivators which will ultimately reduce its movement from soil to plants. A pot study was performed to evaluate the impact of sepiolite from 1% to 5% on Cd solubility and its accumulation in spinach tissues. Soil pH, Cd fractionation, Cd accumulation in spinach tissue and Cd adsorption mechanism were determined. Results were recorded that soil pH was increased from 0.3 to 1.0 units with the increasing rate of sepiolite from 1% to 5%. Similarly, Cd contents in acid soluble phase was decreased by 42.8% and increased in residual phase by 35.8% at 5% rate, relative to control. Moreover, the significant reduction in Cd uptake by spinach shoots and roots was occurred by 26.2% and 30.6% at 5% rate, respectively. Furthermore, the maximum Cd adsorption capacity 37.35 mg g-1 was recorded at 5% rate relative to control. The analysis of FTIR, XRD and SEM also confirm the ability of sepiolite for Cd polluted soil restoration and thereby, reduces its phytoavailability in polluted soil to alleviate food security challenges.

Contributions of root cell wall polysaccharides to Cu sequestration in castor (Ricinus communis L.) exposed to different Cu stresses.

Cell wall polysaccharides play a vital role in binding with toxic metals such as copper (Cu) ions. However, it is still unclear whether the major binding site of Cu in the cell wall varies with different degrees of Cu stresses. Moreover, the contribution of each cell wall polysaccharide fraction to Cu sequestration with different degrees of Cu stresses also remains to be verified. The distribution of Cu in cell wall polysaccharide fractions of castor (Ricinus communis L.) root was investigated with various Cu concentrations in the hydroponic experiment. The results showed that the hemicellulose1 (HC1) fraction fixed 44.9%-67.8% of the total cell wall Cu under Cu stress. In addition, the pectin fraction and hemicelluloses2 (HC2) fraction also contributed to the Cu binding in root cell wall, accounting for 11.0%-25.9% and 14.1%-26.6% of the total cell wall Cu under Cu treatments, respectively. When the Cu levels were ≤25 µmol/L, pectin and HC2 contributed equally to Cu storage in root cell wall. However, when the Cu level was higher than 25 µmol/L, the ability of the pectin to bind Cu was easy to reach saturation. Much more Cu ions were bound on HC1 and HC2 fractions, and the HC2 played a much more important role in Cu binding than pectin. Combining fourier transform infrared (FT-IR) and two-dimensional correlation analysis (2D-COS) techniques, the hemicellulose components were showed not only to accumulate most of Cu in cell wall, but also respond fastest to Cu stress.

Water management of alternate wetting and drying reduces the accumulation of arsenic in brown rice - as dynamic study from rhizosphere soil to rice.

There have been no controlled systematic studies on the dynamic variation of As in soil - soil porewater - root surface (Fe plaques) - rice plant system under alternate wetting and drying (AWD) irrigation. Therefore, effects of continuous flooding (CF) and AWD treatments (2F2D: 2-day flooding followed by 2-day drying; 7F2D: 7-day flooding followed by 2-day drying) on the migration of As from soil to brown rice were studied. Results indicated that As contents in brown rice of AWD treatments (0.03-0.17 mg/kg) were 43.3%-85.0% lower than CF (0.20-0.30 mg/kg). AWD irrigation promoted the transformation of Fe and associated As in rhizosphere soil from highly active forms (H2O and HCl-extracted Fe-bound As) to stable states (oxalate and DCB-extracted Fe-bound As), which decreased the release of As from rhizosphere soil. The dynamic variation of As contents in porewater was described by a dissolution factor (DF) which decreased significantly in AWD treatments and had a significant positive correlation (R2 = 0.83; P < 0.05) with As contents in brown rice. In addition, contents of Fe and associated As on the root surface were about 17.1% and 11.0% higher in AWD treatments than in CF treatment, respectively, and the transfer factor (TF) of As from root surface into root was 22.7% lower in AWD treatments than in CF. In summary, AWD irrigation reduced As contents in porewater through decreasing availability of As in rhizosphere soil; and AWD also reduced the transfer of As into rice roots through promoting As sequestration by Fe plaques on root surface.

Oxalic acid activated phosphate rock and bone meal to immobilize Cu and Pb in mine soils.

The contamination of soil by copper (Cu) and lead (Pb) is a serious concern because of its high health risk via the food chain. Oxalic acid-activated phosphate rock (APR) and bone meal (BM) were applied to Cu and Pb co-contaminated soil to investigate their efficacy in the immobilization of Cu and Pb. APR and BM were applied into the contaminated soil (158.8 mg/kg total Pb and 573.2 mg/kg Cu) at four levels of dosages (0.1%, 0.5%, 2%, and 4%) and incubated for one year. The results demonstrated that the acid exchangeable Pb fraction in the soil treated with APR and BM decreased compared to the control, while there was no noticeable change in the acid-exchangeable Cu fraction in the soil treated with either APR or BM. Meanwhile, the application of BM and APR increased the fraction of residual Cu and Pb in the polluted soils. Moreover, the addition of either APR or BM at the dose of 4% decreased the concentrations of CaCl2-extractable Cu and Pb in the amended soil, and the percentages of that reduction in the APR amended soils were 56% and 91% and in BM amended soils were 67% and 64%, respectively. The immobilization of Cu and Pb by APR and BM might be induced by the increased soil pH and soluble P contents in the amended soils. In general, BM is more effective than APR on the immobilization of Cu in polluted soil, while APR had greater efficiency than BM on the immobilization of Pb when the levels of amendments were above 2%.

Rice straw- and rapeseed residue-derived biochars affect the geochemical fractions and phytoavailability of Cu and Pb to maize in a contaminated soil under different moisture content.

Management of toxic elements contaminated upland and wetland soils using biochar is of great concern from both agricultural and environmental points of view. The impact of rice straw- and rapeseed residue-derived biochars produced under 300 °C and 550 °C (added to the soil at 2% and 5%; w/w) on the geochemical fractions, phytoavailability, and uptake of Cu and Pb in a contaminated mining soil under different moisture contents (80%, 60%, and 40% of soil field capacity) was investigated in a greenhouse pot experiment using maize. The higher rate of rice straw-derived biochar pyrolyzed at 550 °C caused a significant reduction in the mobile (soluble + exchangeable) fraction of Cu (59.42%) and Pb (75.4%) and increased the residual fractions of Cu (37.8%) and Pb (54.7%) in the treated soil under the highest moisture content (80%) as compared to the untreated soil. Therefore, this biochar significantly decreased the phytoavailability (CaCl2-extractable form) of Cu by 59.5% and Pb by 67.6% under the highest moisture content. Also, at the same moisture level (80%), the higher rate of rapeseed residue-derived biochar pyrolyzed at 550 °C decreased significantly the phytoavailability of Cu by 46.5% and Pb by 60.52% as compared to the untreated soil. The 5% rate of the higher temperature pyrolyzed rice straw and rapeseed biochars decreased the uptake of Cu and Pb by the roots and shoots of maize up to 51% for Cu and 45% for Pb. Immobilization of Cu and Pb in the biochar-treated soil at 80% moisture content may possibly due to the associated increase of soil pH and poorly-crystalline Fe oxides content, and/or the metals precipitation with sulfides. These results indicated that application of high temperature pyrolyzed rice straw- and rapeseed residue-derived biochars at 5% could immobilize Cu and Pb and decrease their uptake by maize under high levels of moisture content; consequently, they can be used for phyto-management of Cu and Pb contaminated wetland soils.

Effective Role of Biochar, Zeolite and Steel Slag on Leaching Behavior of Cd and Its Fractionations in Soil Column Study.

Remediation of cadmium (Cd) from contaminated soils is considered a complicated task of environmental safety. A column leaching experiment was planned to estimate the influence of biochar (BC), zeolite (ZE) and steel slag (SL) at 1.5% and 3% application rate on Cd leaching behavior and chemical fractionation in contaminated soil. A sequential extraction procedure, the European Community Bureau of Reference (BCR), Toxicity Characteristic Leaching Procedure (TCLP) and NH4NO3 were performed after leaching was completed. The soluble portion of Cd was decreased by 36.3%, 18.4% and 28.7% and Cd contents in leachate were decreased by 44.8%, 30% and 31.3% after BC, ZE and SL addition at 3% rate, respectively over control soil. The greater reduction in TCLP extractable Cd was observed by 29.6% with BC and 22.4% with ZE and 25.7% with SL at 3% application rate. Overall, biochar can be considered an efficient soil amendment to reduce Cd leaching as well as increased its stabilization within soil profile.

Comparative efficiency of rice husk-derived biochar (RHB) and steel slag (SS) on cadmium (Cd) mobility and its uptake by Chinese cabbage in highly contaminated soil.

Cadmium (Cd) contamination in red soil has been considered as a severe threat due to its toxic effects on plants and food security. This study aims to evaluate the comparative efficiency of rice husk-derived biochar (RHB) and steel slag (SS) metal stabilizer on decreasing Cd mobility and bioavailability to Chinese cabbage grown on acidic contaminated red soil. Several extraction techniques: a sequential extraction procedure, the European Community Bureau of Reference, toxicity characteristics leaching procedure, ammonium nitrate, and simple bioaccessibility extraction test were used to measure Cd mobility after amelioration of the investigated soil. The results indicated that application of stabilizer significantly increased soil chemical properties including soil pH, cation exchange capacity, nutrients, and organic matter. The soluble portion of Cd in soil was significantly decreased by 17.6-31.2% and 7.8-11.7% for RHB and SS at 1.5% and 3% application rate, respectively. Moreover, Cd bioaccessibility was significantly declined by 37.08% with RHB and 11.3% with SS at 3% rate. Inlcorporation of RHB at 3% can effectively immobilize Cd and thereby, reduce its phytoavailability to cabbage in Cd-contaminated soil to mitigate food security risks.

Efficiency of C3 and C4 Plant Derived-Biochar for Cd Mobility, Nutrient Cycling and Microbial Biomass in Contaminated Soil.

Biochar is considered a novel soil amendment to reduce metal mobility, but its influence on soil chemical and biochemical properties is not fully understood. In the present study, biochar derived from rice straw (RSB), rice hull (RHB), and maize stover (MSB) was used to evaluate comparative efficiency on Cd mobility and soil biochemical properties. Ammonium nitrate extractable Cd significantly decreased among all the applied biochar types and application rates. The European Community Bureau of Reference (BCR) technique showed significant decrease in acid-soluble Cd by 24%-32%, 19%-23%, and 22%-27% for RSB, RHB, and MSB, respectively at the 1.5% and 3% rate. However, the concentration of Cd in the residual increased by 38%, 35% and 36% for RSB, RHB and MSB, respectively at a 3% application rate. Soil microbial biomass (C and N) and inorganic nitrogen forms (NH4 and NO3) significantly increased among all biochar applications. Overall, RSB demonstrated positive results as soil amendments for Cd immobilization, increasing soil nutrient availability, and enhancing soil microbial biomass.

Cadmium Immobilization Potential of Rice Straw-Derived Biochar, Zeolite and Rock Phosphate: Extraction Techniques and Adsorption Mechanism.

Heavy metal contamination in agricultural soils has become a serious environmental concern due to their generally high mobility and toxic effects on plants and food security. An incubation study was conducted to assess the effectiveness of biochar (BC), zeolite (ZE) and rock phosphate (RP) stabilizers on the immobilization of cadmium (Cd) in contaminated soils. Various extraction techniques were carried out: a sequential extraction procedure, the European Community Bureau of Reference (BCR), the toxicity characteristics leaching procedure (TCLP) and extraction with ammonium nitrate. In addition, Cd adsorption by these materials was observed using Langmuir and Freundlich isotherms. The results showed that with an increase in soil pH the exchangeable fraction of Cd in soil was significantly reduced by 28%-29.4%, 9%-13% and 4%-14% for BC, ZE, and RP, respectively. According to the Langmuir adsorption isotherm, BC-amended soil showed a higher adsorption capacity (Qm) of Cd from 8.38 to 19.85 mg g-1. Overall, BC offered better results when compared to other amendments.

Sorption of Cu by humic acid from the decomposition of rice straw in the absence and presence of clay minerals.

The sorption of Cu on humic acid (HA) from the decomposition of rice straw in the absence (Ck-HA) and presence of montmorillonite (M-HA), kaolinite (K-HA), gibbsite (Gi-HA) and goethite (Go-HA) was investigated at pH 5.0 by using batch studies combined with isothermal titration calorimetry (ITC) and atomic force microscopy (AFM). Characterization by elemental analysis and potentiometric titration showed the composition difference among these five HA. The sorption capacity and rate increased in the order: M-HA < K-HA < Gi-HA < Ck-HA < Go-HA. ITC results revealed that the sorption process was spontaneous and endothermic. The aggregation of HA particles after sorption were observed by AFM images. The influence of pH and positive correlations between the sorption capacity and the content of acidic functional groups of HA indicated that the dissociated acidic functional groups, especially the dissociation of carboxylic groups in HA played an important role in Cu sorption. Sequential desorption of sorbed Cu showed that the surface bonded fraction (97.6-99.0%) was significantly higher than the ion exchanged fraction (1.0-2.4%). Markedly positive entropies (ΔS, 94.4-104.3 J mol-1 K-1) further demonstrated that Cu binding to HA by forming inner-sphere complexes. The findings of this study would promote the understanding on the environmental impact of the decomposition of organic waste from agricultural production.

Organic acids, amino acids compositions in the root exudates and Cu-accumulation in castor (Ricinus communis L.) Under Cu stress.

Ricinus communis L. is a hyperaccumulation plant newly discovered in an abandoned land of Cu mine in China. A hydroponic experiment was then carried out to determine the root exudates in the Cu-tolerant castor (Ricinus communis L.). Plants were grown in nutrient solution with increasing level of Cu doses (0, 100, 250, 500, and 750 µmol/L Cu) in the form of CuSO4. Cu accumulation in the roots and shoots of castor, and root exudates collected from the castor were measured. The results indicated that the castor had a high Cu accumulation capacity and the Cu concentrations in the shoots and roots of the castor treated with 750 µmol/L Cu were 177.1, 14586.7 mg/kg, respectively. Tartaric was the largest in the root exudates in terms of concentrations, which reached up to 329.13 µmol/g (dry plant) in the level of 750 µmol/L Cu. There was a significantly positive linear relationship between the Cu concentration in root and the concentration of succinic (R = 0.92, P < 0.05), tartaric (R = 0.96, P < 0.01), and citric (R = 0.89, P < 0.05). These results indicated that the difference in root exudation from castor could affect their Cu tolerance. What is more, significant is that the high tartaric and citric, the low oxalic and cysteine in the root exudation of castor contributed to toleration of high Cu concentrations.

Immobilization of lead in anthropogenic contaminated soils using phosphates with/without oxalic acid.

Understanding the effects of oxalic acid (OA) on the immobilization of Pb(II) in contaminated soils by phosphate materials, has considerable benefits for risk assessment and remediation strategies for the soil. A series of phosphate amendments with/without oxalic acid were applied to two anthropogenic contaminated soils. We investigated the immobilization of Pb(II) by KH2PO4, phosphate rock (PR), activated phosphate rock (APR) and synthetic hydroxyapatite (HAP) at different phosphate:Pb (P:Pb) molar ratios (0, 0.6, 2.0 and 4.0) in the presence/absence of 50 mmol oxalic acid/kg soil, respectively. The effects of treatments were evaluated using single extraction with deionized water or CaCl2, Community Bureau of Reference (BCR) sequential extraction and toxicity characteristic leaching procedure (TCLP) methods. Our results showed that the concentration of water extractable, exchangeable and TCLP-Pb all decreased with incubation time. The concentration of water-extractable Pb after 120 days was reduced by 100% when soils were amended with APR, HAP and HAP+OA, and the TCLP-Pb was <5 mg/L for the red soil at P:Pb molar ratio 4.0. Water-soluble Pb could not be detected and the TCLP-Pb was <5 mg/L at all treatments applied to the yellow-brown soil. BCR results indicated that APR was most effective, although a slight enhancement of water-soluble phosphate was detected at the P:Pb molar ratio 4.0 at the beginning of incubation. Oxalic acid activated phosphates, and so mixing insoluble phosphates with oxalic acid may be a useful strategy to improve their effectiveness in reducing Pb bioavailability.

[Effect of EDDS Application on Soil Cu/Cd Availability and Uptake/transport by Castor].

To investigate the effect of chelating agents on plant uptake of heavy metals, castor (Ricinus communis L.) was used as the test plant. Soil culture and pot experiments were conducted to study the effects of different concentrations of ethylenediamine disuccinic acid (EDDS) on the forms of Cu and Cd in soil and their absorption and transport by castor. The results showed that the application of EDDS significantly increased the content of available Cu and Cd. After 15 days of cultivation, the available Cu and Cd concentrations in the soil increased by 43.01%-103.55% and 51.78%-69.43%, respectively. EDDS promoted the conversion of reducible Cu to weak acid extractable and increased the mobility of Cu. Meanwhile, the application of EDDS promoted the absorption, transport, and enrichment of Cu in castor. Under the application of 2.5 mmol·kg-1 EDDS and 5.0 mmol·kg-1 EDDS, the Cu concentrations in the shoots were 4.88 times and 16.65 times higher than that of the control (P< 0.05), and the Cu concentrations in the roots were 2.89 times and 3.60 times higher than that of the control (P< 0.05), respectively. The Cu transport coefficient significantly increased by 72.73% and 381.82% when treated with EDDS 2.5 and EDDS 5.0. Simultaneously, the phytoextraction of Cu in shoots, roots, and their sum were 14.08, 2.16, and 4.70 times higher than that of the control (P<0.05), respectively, when treated with EDDS 5.0. Furthermore, EDDS significantly increased the Cd concentrations in castor. When treated with EDDS 2.5 the shoots and roots increased by 15.15% and 57.42%, respectively, and the phytoextraction of total Cd significantly increased by 13.44%. Generally, the EDDS treatment could increase the available Cu and Cd in soil, promote the uptake of Cu and Cd, and improve the phytoremediation efficiency of castor. Among them, the addition of 5.0 mmol·kg-1 EDDS had the best effect for Cu, whereas the addition of 2.5 mmol kg-1 EDDS had a higher increase in the phytoextraction of Cd.

Nitrate reduction coupling with As(III) oxidation in neutral As-contaminated paddy soil preserves nitrogen, reduces N2O emissions and alleviates As toxicity.

In arsenic (As)-contaminated paddy soil, microbial-driven nitrate (NO3-) reduction coupled with arsenite (As(III)) oxidation can reduce As toxicity, but the whereabouts of NO3- remain unclear. In this study, the experiments were established using selective streptomycin (STP) and cyclohexylamine to inhibit bacterial and fungal functional responses, respectively, and metagenomic sequencing techniques were used to explain the biological mechanisms of NO3- reduction coupled with As(III) oxidation in neutral As-contaminated paddy soil. The results indicated that fungal denitrification resulted in stronger nitrous oxide (N2O) emissions (321.6 µg kg-1) than bacterial denitrification (175.9 µg kg-1) in neutral As-contaminated paddy soil, but NO3- reduction coupled with As(III) oxidation reduced the N2O emissions. Only adding STP led to ammonium (NH4+) generation (17.7 mg kg-1), and simultaneously more NH4+ appeared in NO3- reduction coupled with As(III) oxidation; this may be because it improved the electron transfer efficiency by 18.2 %. Achromobacter was involved in denitrification coupled with As(III) oxidation. Burkholderiales was responsible for NO3- reduction to NH4+ coupled with As(III) oxidation. This study provided a theoretical basis for NO3- reduction coupled with As(III) oxidation reducing N2O emissions, promoting the reduction of NO3- to NH4+, and reducing As toxicity in paddy soil.

Role of genes encoding microbial carbohydrate-active enzymes in the accumulation and dynamics of organic carbon in subtropical forest soils.

Microbial anabolism and catabolism regulate the accumulation and dynamics of soil organic carbon (SOC). However, very little attention has been paid to the role of microbial functional traits in the accumulation and dynamics of SOC in forest soils. In this study, nine forest soils were selected at three altitudes (600 m, 1200 m, and 1500 m) and three soil depths (0-15 cm, 15-30 cm, and 30-45 cm) located in Jiugong Mountain. Vertical traits of functional genes encoding microbial carbohydrate-active enzymes (CAZymes) were observed using metagenomic sequencing. Soil amino sugars were used as biomarkers to indicate microbial residue carbon (MRC). The results showed that GH1 (ß-glucosidase: 147.49 TPM) and GH3 (ß-glucosidase: 109.09 TPM) were the dominant genes for plant residue decomposition, and their abundance increased with soil depth and peaked in the deep soil at 600 m (GH1: 147.89 TPM; GH3: 109.59 TPM). The highest abundance of CAZymes for fungal and bacterial residue decomposition were GH18 (chitinase: 30.81 TPM) and GH23 (lysozyme: 58.02 TPM), respectively. The abundance of GH18 increased with soil depth, while GH23 showed the opposite trend. Moreover, MRC accumulation was significantly positively correlated with CAZymes involved in the degradation of hemicellulose (r = 0.577, p = 0.002). Compared with the soil before incubation, MRC in the topsoil at the low and middle altitudes after incubation increased by 4 % and 8 %, respectively, while MRC in the soils at 1500 m tended to decrease (p > 0.05). The mineralization capacity of SOC at 1500 m was significantly higher than that at 1200 m and 600 m (p < 0.05). Our results suggested that microbial function for degrading plant residue components, especially hemicellulose and lignin, contributed greatly to SOC accumulation and dynamics. These results were vital for understanding the roles of microbial functional traits in C cycling in forest.