There is a specific response to pH by isolates of Haemophilus influenzae and this has a direct influence on biofilm formation.

BACKGROUND: Haemophilus influenzae colonizes the nasopharynx as a commensal. Strain-specific factors allow some strains to migrate to particular anatomical niches, such as the middle ear, bronchi or blood, and induce disease by surviving within the conditions present at these sites in the body. It is established that H. influenzae colonization and in some cases survival is highly dependent on their ability to form a biofilm. Biofilm formation is a key trait in the development of chronic infection by certain isolates. This is exemplified by the contrast between the biofilm-forming strains found in middle ear infections and those isolates that survive within the blood and are rarely associated with biofilm development. RESULTS: Screening a group of H. influenzae strains revealed only slight variations in their growth across a range of pH conditions. However, some isolates responded to a pH of 8.0 by the formation of a biofilm. While the type b capsular blood isolate Eagan did not form a biofilm and grew at the same rate regardless of pH 6.8-8.0, transcriptomic analyses demonstrated that at pH 8.0 it uniquely induced a gluconate-uptake and metabolism pathway, which concurrently imports H+. A non-typeable H. influenzae, isolated from the middle ear, induced biofilm formation at pH 8.0, and at this pH it induced a series of iron acquisition genes, consistent with previous studies linking iron homeostasis to biofilm lifestyle. CONCLUSIONS: Different strains of H. influenzae cope with changes in environmental factors using strain-specific mechanisms. These pathways define the scope and mode of niche-survival for an isolate. The pH is a property that is different from the middle ear (at least pH 8.0) compared to other sites that H. influenzae can colonize and infect. The transcriptional response to increasing pH by H. influenzae varies between strains, and pH is linked to pathways that allow strains to either continue free-living growth or induction of a biofilm. We showed that a biofilm-forming isolate induced iron metabolism pathways, whereas a strain that does not form biofilm at increasing pH induced mechanisms for growth and pH homeostasis based on sugar acid transport.

Brief Dataset on produced handsheet from oil palm residue lignocellulose treated with Bacillus cereus on mechanical and physical characterization.

This article presents experimental data on oil palm biomass (oil palm leaves, oil palm trunk and empty fruit bunch) handsheet production characterization by biodelignification treatment using Bacillus cereus extracted from termite gut (Coptotermus curvignathus). It associates the lignocellulose chemical composition obtained via technical association pulp and paper industry TAPPI T 222 om-02 testing on lignin content reduction determination, holocellulose and hemicellulose content determination (Kurscher-Hoffner method). Several data obtained for handsheet characterization presents brightness, opacity, contrast ratio, din transparency, thickness, bursting and tearing indexes are collected. Handsheet surface morphology was also observed on ratio of gaps differences between fiber bonding conducted using scanning electron microscope (SEM) and ImageJ software. The raw data findings supplement chemical composition analysis for both untreated and treated substrates on handsheet quality performance check as presented in the research article "Bio-Mechanical Pulping of Bacteria Pre-Treatment on Oil Palm Biomass for Handsheet Production" [1]. For understanding correlations into the difference among lignocellulose content composition which affect the handsheet formation and mechanical strength refer to article from this research [1]. This dataset is made publicly available for optimizing alternative waste material reuse in the pulp and paper industrial section.

Evaluation of Lysinibacillus SP, isolated from coptotermes curvignathus gut, for the delignification of oil palm residues / Avaliação de Lysinibacillus SP, isolado a partir do intestino de Coptotermes curvignathus, para a deslignificação de resíduos de óleo de palma (Dendê)

The application of ligninolytic bacteria and enzymes is a green pre-treatment alternative in the production of paper and biofuel from oil palm residues. In this study we investigated the ability of Lysinibacillus pakistanensis isolated from termite gut in degrading the lignin component of oil palm residues. The residues were biotreated with the bacterial strain in an aerated submerged fermentation system for 7 days at 30 , pH 7 and compared with untreated control. Enzyme activities were determined using specific substrates. Peak lignin peroxidase (377.6 U/L), manganese peroxidase (218.19 U/L), and laccase (405.4 U/L) activity were recorded after 4,4, and 5 days of incubation respectively, using oil palm leaf as substrates. Lignin loss of 4.5%, 5.7% and 6.6% in oil palm leaf, oil palm trunk and empty fruit bunch respectively was achieved after treatment with the microorganism. SEM images revealed structural changes in the cell wall of the residues. Pre-treatment with this bacterial strain has promising prospects of improving the efficiency of the pulping process in an environmentally safe manner.

A aplicação de bactérias e enzimas ligninolíticas é uma alternativa verde de pré-tratamento na produção de papel e biocombustível a partir de resíduos de óleo de palma. Neste estudo, investigamos a capacidade de Lysinibacillus pakistanensis isolado do intestino de cupins na degradação do componente de lignina dos resíduos de dendê. Os resíduos foram biotratados com a estirpe bacteriana num sistema de fermentação submersa arejado durante 7 dias a 30ºC, pH 7 e comparados com controle não tratado. As atividades enzimáticas foram determinadas usando substratos específicos. Pico de lignina peroxidase (377,6 U/L), peroxidase de manganês (218,19 U/L) e atividade de lacase (405,4 U/L) foram registradas após 4,4 e 5 dias de incubação, respectivamente, utilizando como substratos a folha da palmeira de dendê. A perda de lignina de 4,5%, 5,7% e 6,6% na folha da palmeira, no tronco do dendezeiro e cacho de frutas vazio, respectivamente, foi alcançada após o tratamento com o microorganismo. Imagens de MEV revelaram alterações estruturais na parede celular dos resíduos. O pré-tratamento com esta cepa bacteriana tem perspectivas promissoras de melhorar a eficiência do processo de polpação de maneira ambientalmente segura.