Detalhe da pesquisa
1.
Host-Microbe-Drug-Nutrient Screen Identifies Bacterial Effectors of Metformin Therapy.
Cell
; 178(6): 1299-1312.e29, 2019 09 05.
Artigo
em Inglês
| MEDLINE | ID: mdl-31474368
2.
Dynamic optimization reveals alveolar epithelial cells as key mediators of host defense in invasive aspergillosis.
PLoS Comput Biol
; 17(12): e1009645, 2021 12.
Artigo
em Inglês
| MEDLINE | ID: mdl-34898608
3.
Metabolic Functions of Gut Microbes Associate With Efficacy of Tumor Necrosis Factor Antagonists in Patients With Inflammatory Bowel Diseases.
Gastroenterology
; 157(5): 1279-1292.e11, 2019 11.
Artigo
em Inglês
| MEDLINE | ID: mdl-31326413
4.
Epithelial RNase H2 Maintains Genome Integrity and Prevents Intestinal Tumorigenesis in Mice.
Gastroenterology
; 156(1): 145-159.e19, 2019 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-30273559
5.
Optimality principles reveal a complex interplay of intermediate toxicity and kinetic efficiency in the regulation of prokaryotic metabolism.
PLoS Comput Biol
; 13(2): e1005371, 2017 02.
Artigo
em Inglês
| MEDLINE | ID: mdl-28212377
6.
BacArena: Individual-based metabolic modeling of heterogeneous microbes in complex communities.
PLoS Comput Biol
; 13(5): e1005544, 2017 05.
Artigo
em Inglês
| MEDLINE | ID: mdl-28531184
7.
Uncoupling of mucosal gene regulation, mRNA splicing and adherent microbiota signatures in inflammatory bowel disease.
Gut
; 66(12): 2087-2097, 2017 12.
Artigo
em Inglês
| MEDLINE | ID: mdl-27694142
8.
Deciphering the regulation of metabolism with dynamic optimization: an overview of recent advances.
Biochem Soc Trans
; 45(4): 1035-1043, 2017 08.
Artigo
em Inglês
| MEDLINE | ID: mdl-28754658
9.
Pervasive Selection for Cooperative Cross-Feeding in Bacterial Communities.
PLoS Comput Biol
; 12(6): e1004986, 2016 06.
Artigo
em Inglês
| MEDLINE | ID: mdl-27314840
10.
Computing autocatalytic sets to unravel inconsistencies in metabolic network reconstructions.
Bioinformatics
; 31(3): 373-81, 2015 Feb 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-25286919
11.
Optimal programs of pathway control: dissecting the influence of pathway topology and feedback inhibition on pathway regulation.
BMC Bioinformatics
; 16: 163, 2015 May 16.
Artigo
em Inglês
| MEDLINE | ID: mdl-25982966
12.
Mathematical models for explaining the Warburg effect: a review focussed on ATP and biomass production.
Biochem Soc Trans
; 43(6): 1187-94, 2015 Dec.
Artigo
em Inglês
| MEDLINE | ID: mdl-26614659
13.
Optimality in the zonation of ammonia detoxification in rodent liver.
Arch Toxicol
; 89(11): 2069-78, 2015 Nov.
Artigo
em Inglês
| MEDLINE | ID: mdl-26438405
14.
Recurrent Phases of Strict Protein Limitation Inhibit Tumor Growth and Restore Lifespan in A Drosophila Intestinal Cancer Model.
Aging Dis
; 15(1): 226-244, 2024 Feb 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-37962464
15.
Gut-associated functions are favored during microbiome assembly across a major part of C. elegans life.
mBio
; 15(5): e0001224, 2024 May 08.
Artigo
em Inglês
| MEDLINE | ID: mdl-38634692
16.
Nonlinear DNA methylation trajectories in aging male mice.
Nat Commun
; 15(1): 3074, 2024 Apr 09.
Artigo
em Inglês
| MEDLINE | ID: mdl-38594255
17.
Metabolic model predictions enable targeted microbiome manipulation through precision prebiotics.
Microbiol Spectr
; 12(2): e0114423, 2024 Feb 06.
Artigo
em Inglês
| MEDLINE | ID: mdl-38230938
18.
Changes in Bacterial Gut Composition in Parkinson's Disease and Their Metabolic Contribution to Disease Development: A Gut Community Reconstruction Approach.
Microorganisms
; 12(2)2024 Feb 04.
Artigo
em Inglês
| MEDLINE | ID: mdl-38399728
19.
Microbiomarkers in inflammatory bowel diseases: caveats come with caviar.
Gut
; 66(10): 1734-1738, 2017 10.
Artigo
em Inglês
| MEDLINE | ID: mdl-28733278
20.
Metabolic model predictions enable targeted microbiome manipulation through precision prebiotics.
bioRxiv
; 2023 Feb 18.
Artigo
em Inglês
| MEDLINE | ID: mdl-36824941