Novel buffer for long-term preservation of DNA in biological material at room temperature.

The collection and preservation of biological material before DNA analysis is critical for inter alia biomedical research, medical diagnostics, forensics and biodiversity conservation. In this study, we evaluate an in-house formulated buffer called the Forensic DNA Laboratory-buffer (FDL-buffer) for preservation of biological material for long term at room temperature. Human saliva stored in the buffer for 8 years, human blood stored for 3 years and delicate animal tissues from the jellyfish Pelagia noctiluca comb jelly Beroe sp., stored for 4 and 6 years respectively consistently produced high-quality DNA. FDL-buffer exhibited compatibility with standard organic, salting out and spin-column extraction methods, making it versatile and applicable to a wide range of applications, including automation.

DNA extractions were performed by Salting out, PCI, ZymoQuick and DNAeazy methods. DNA quantity and quality were assessed using qPCR, Qubit, gel electrophoresis, as well as Sanger sequencing, microsatellite profiling and SNPchip analysis.

A physics-based model of swarming jellyfish.

We propose a model for the structure formation of jellyfish swimming based on active Brownian particles. We address the phenomena of counter-current swimming, avoidance of turbulent flow regions and foraging. We motivate corresponding mechanisms from observations of jellyfish swarming reported in the literature and incorporate them into the generic modelling framework. The model characteristics is tested in three paradigmatic flow environments.

A new macromedusa from the coast of Mozambique: Aurelia mozambica sp. nov. (Scyphozoa: Ulmaridae).

A new species of the cosmopolitan jellyfish genus Aurelia is described from the coastal waters of Mozambique using a combination of morphological, meristic and genetic information (COI and 18S). The species can be separated from congeners that have been recently described by a combination of bell shape, number of canal origins and anastomoses, and the shape of the manubrium and oral arms. Three types of nematocysts are present in the tissues of both the bell margin and oral arms, and this description of the cnidome will allow for future comparison. Pairwise genetic comparisons showed a mean COI divergence of 4.8% within the group, and a mean divergence ranging between 15% and 22% with all other species of Aurelia.

Proteomic profiling of ascidians as a tool for biomonitoring marine environments.

Applying a proteomic approach for biomonitoring marine environments offers a useful tool for identifying organisms' stress responses, with benthic filter-feeders being ideal candidates for this practice. Here, we investigated the proteomic profile of two solitary ascidians (Chordata, Ascidiacea): Microcosmus exasperatus, collected from five sites along the Mediterranean coast of Israel; and Polycarpa mytiligera collected from four sites along the Red Sea coast. 193 and 13 proteins in M. exasperatus and P. mytiligera, respectively, demonstrated a significant differential expression. Significant differences were found between the proteomes from the northern and the southern sites along both the Mediterranean and the Red Sea coasts. Some of the significant proteins had previously been shown to be affected by environmental stressors, and thus have the potential to be further developed as biomarkers. Obtaining a proteomic profile of field-collected ascidians provides a useful tool for the early-detection of a stress response in ascidians worldwide.