Detalhe da pesquisa
1.
Enter the Matrix: Factorization Uncovers Knowledge from Omics.
Trends Genet
; 34(10): 790-805, 2018 10.
Artigo
em Inglês
| MEDLINE | ID: mdl-30143323
2.
Evaluating optimal therapy robustness by virtual expansion of a sample population, with a case study in cancer immunotherapy.
Proc Natl Acad Sci U S A
; 114(31): E6277-E6286, 2017 08 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-28716945
3.
Splice Expression Variation Analysis (SEVA) for inter-tumor heterogeneity of gene isoform usage in cancer.
Bioinformatics
; 34(11): 1859-1867, 2018 06 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-29342249
4.
PatternMarkers & GWCoGAPS for novel data-driven biomarkers via whole transcriptome NMF.
Bioinformatics
; 33(12): 1892-1894, 2017 Jun 15.
Artigo
em Inglês
| MEDLINE | ID: mdl-28174896
5.
Two clinical phenotypes in polycythemia vera.
N Engl J Med
; 371(9): 808-17, 2014 Aug 28.
Artigo
em Inglês
| MEDLINE | ID: mdl-25162887
6.
NF-κB and stat3 transcription factor signatures differentiate HPV-positive and HPV-negative head and neck squamous cell carcinoma.
Int J Cancer
; 137(8): 1879-89, 2015 Oct 15.
Artigo
em Inglês
| MEDLINE | ID: mdl-25857630
7.
Correcting transcription factor gene sets for copy number and promoter methylation variations.
Drug Dev Res
; 75(6): 343-7, 2014 Sep.
Artigo
em Inglês
| MEDLINE | ID: mdl-25195578
8.
Updating annotations with the distributed annotation system and the automated sequence annotation pipeline.
Bioinformatics
; 28(21): 2858-9, 2012 Nov 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-22945787
9.
Gene expression signatures modulated by epidermal growth factor receptor activation and their relationship to cetuximab resistance in head and neck squamous cell carcinoma.
BMC Genomics
; 13: 160, 2012 May 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-22549044
10.
Knowledge-based data analysis comes of age.
Brief Bioinform
; 11(1): 30-9, 2010 Jan.
Artigo
em Inglês
| MEDLINE | ID: mdl-19854753
11.
CoGAPS: an R/C++ package to identify patterns and biological process activity in transcriptomic data.
Bioinformatics
; 26(21): 2792-3, 2010 Nov 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-20810601
12.
Many ways to land upright: novel righting strategies allow spotted lanternfly nymphs to land on diverse substrates.
J R Soc Interface
; 18(181): 20210367, 2021 08.
Artigo
em Inglês
| MEDLINE | ID: mdl-34376093
13.
Correction: Novel Insight into Mutational Landscape of Head and Neck Squamous Cell Carcinoma.
PLoS One
; 15(5): e0233409, 2020.
Artigo
em Inglês
| MEDLINE | ID: mdl-32401780
14.
Information systems for cancer research.
Cancer Invest
; 26(10): 1060-7, 2008 Dec.
Artigo
em Inglês
| MEDLINE | ID: mdl-19093263
15.
Estimating gene function with least squares nonnegative matrix factorization.
Methods Mol Biol
; 408: 35-47, 2007.
Artigo
em Inglês
| MEDLINE | ID: mdl-18314576
16.
Incorporation of gene ontology annotations to enhance microarray data analysis.
Methods Mol Biol
; 377: 243-54, 2007.
Artigo
em Inglês
| MEDLINE | ID: mdl-17634621
17.
Determining transcription factor activity from microarray data using Bayesian Markov chain Monte Carlo sampling.
Stud Health Technol Inform
; 129(Pt 2): 1250-4, 2007.
Artigo
em Inglês
| MEDLINE | ID: mdl-17911915
18.
Integrative computational analysis of transcriptional and epigenetic alterations implicates DTX1 as a putative tumor suppressor gene in HNSCC.
Oncotarget
; 8(9): 15349-15363, 2017 Feb 28.
Artigo
em Inglês
| MEDLINE | ID: mdl-28146432
19.
LS-NMF: a modified non-negative matrix factorization algorithm utilizing uncertainty estimates.
BMC Bioinformatics
; 7: 175, 2006 Mar 28.
Artigo
em Inglês
| MEDLINE | ID: mdl-16569230
20.
Determination of strongly overlapping signaling activity from microarray data.
BMC Bioinformatics
; 7: 99, 2006 Feb 28.
Artigo
em Inglês
| MEDLINE | ID: mdl-16507110