Crystalline Arrays of Copper Porphyrin Qubits Based on Ion-Paired Frameworks.

Molecular electronic spin qubits have great potential for use in quantum information science applications because their structure can be rationally tuned using synthetic chemistry. Their integration into a new class of materials, ion-paired frameworks, allows for the formation of ordered arrays of these molecular spin qubits. Three ion-paired frameworks with varying densities of paramagnetic Cu(II) porphyrins were isolated as micron-sized crystals suitable for characterization by single-crystal X-ray diffraction. Pulse-electron paramagnetic resonance (EPR) spectroscopy probed the spin coherence of these materials at temperatures up to 140 K. The crystals with the longest Cu-Cu distances had a spin-spin relaxation time (Tm) of 207 ns and a spin-lattice relaxation time (T1) of 1.8 ms at 5 K, which decreased at elevated temperature because of spin-phonon coupling. Crystals with shorter Cu-Cu distances also had lower T1 values because of enhanced cross-relaxation from qubit-qubit dipolar coupling. Frameworks with shorter Cu-Cu distances exhibited lower Tm values because of the increased interactions between qubits within the frameworks. Incorporating molecular electronic spin qubits in ion-paired frameworks enables control of composition, spacing, and interqubit interactions, providing a rational means to extend spin relaxation times.

Divergent Synthesis of Alternant Bisanthenequinone and Nonalternant Heptalenodifluorenedione Ring Systems via a Concentration-Dependent Rearrangement.

The synthesis of a diol containing a nonalternant aromatic core was investigated to access a nonalternant isomer of bisanthene with functional groups suitable for two-dimensional polymerization. An alternant diol and its nonalternant isomer were prepared in a short synthetic route from the same bifluorenylidene starting material. The bifluorenylidene reactant undergoes a Stone-Wales rearrangement in neat triflic acid, which unexpectedly provided both an alternant and nonalternant dione. The rearrangement was characterized by spectroscopy and single crystal X-ray diffraction of Grignard addition products of both isomers. The relative yield of the rearranged, alternant product increased along with the initial concentration of its polycyclic aromatic hydrocarbon (PAH) precursor, implicating a bimolecular rearrangement mechanism and enabling the divergent synthesis of both the nonalternant and alternant products. These findings offer convenient access to functional derivatives of two PAH classes of interest for their optoelectronic properties and serve as yet another warning about the importance of characterizing these materials with care, especially when insoluble products must be carried forward in a multistep synthetic route.

Polymerized Molecular Receptors as Adsorbents to Remove Micropollutants from Water.

Organic micropollutants (MPs) are increasing in number and concentration in water systems as a result of human activities. Often from human origin, these micropollutants build up in the environment because organisms lack the mechanisms to metabolize these substances, which cause negative health, ecological, and economic effects. Adsorption-based remediation processes for these compounds often rely on activated carbon materials. However, activated carbons are ineffective against certain MPs, exhibit low removal efficiencies in the presence of common aqueous matrix constituents, and require energy-intensive activation and regeneration processes. To overcome the deficiencies of traditional technologies, novel adsorbents based on molecular receptors offer promising alternative solutions. This Account describes the recent development of polymer adsorbents based on molecular receptors for removing trace organic chemicals from water. Polymer networks based on molecular receptors have high binding affinities for many MPs but, unlike activated carbons, have a specific molecule-binding mechanism that prevents these polymers from being fouled by matrix constituents such as natural organic matter. The size and hydrophobic pocket of the ß-cyclodextrin receptor preferentially adsorbs target molecules such as organic micropollutants in the presence of matrix constituents, and the nature of the cross-linker tunes the binding affinity and selectivity of the adsorbent for specific classes of MPs, including those of varying charge and hydrophobicity. ß-cyclodextrin polymers also exhibit rapid adsorption kinetics and are easily regenerated. This Account details ß-cyclodextrin polymers made with three different cross-linkers, including a polymer that is postsynthetically transformed from a negatively charged polymer to a positively charged polymer to invert the polymer's micropollutant adsorption profile. Morphological constraints have so far limited these cross-linked polymers' ability to be used in commercial applications, but two methods to create larger and more uniformly sized particles for use in flow-through applications are described here. ß-Cyclodextrin polymers are useful for trapping organic micropollutants such as bisphenol A, perfluorooctanoic acid, and many kinds of pharmaceuticals and pesticides, but their binding pockets are too large to capture micropollutants that are small or of high polarity. Other molecular receptors such as resorcinarene cavitands can target lower-molecular-weight MPs, including halomethane disinfection byproducts and industrial solvents, that are not bound strongly by ß-cyclodextrins. These materials demonstrate the potential of expanding the library of polymers based on molecular receptors. Overall, these emerging adsorbents show promise for the removal of legacy and emerging MPs from water, as well as the ability to rationally tune the adsorbent's structure to target the most persistent and toxic MPs.

Resorcinarene Cavitand Polymers for the Remediation of Halomethanes and 1,4-Dioxane.

Disinfection byproducts such as trihalomethanes are commonly found in drinking water. Trihalomethanes are formed upon chlorination of natural organic matter found in many drinking water sources. Inspired by molecular CHCl3⊂cavitand host-guest complexes, we designed porous polymers composed of resorcinarene receptors. These materials show higher affinity for halomethanes than a specialty activated carbon used for trihalomethane removal. The cavitand polymers show similar removal kinetics as activated carbon and have high capacity (49 mg g-1 of CHCl3). These materials maintain their performance in drinking water and can be thermally regenerated. Cavitand polymers also outperform commercial resins for 1,4-dioxane adsorption, which contaminates many water sources. These materials show promise for water treatment and demonstrate the value of using supramolecular receptors to design adsorbents for water purification.

A Molecular Chaperone for G4-Quartet Hydrogels.

Thioflavin T (ThT) functions as a molecular chaperone for gelation of water by guanosine and lithium borate. Substoichiometric ThT (1 mol % relative to hydrogelator) results in faster hydrogelation as monitored by (1)H NMR and visual comparison. Vial-inversion tests and rheology show that ThT increases the stiffness of the Li(+) guanosine-borate (GB) hydrogel. In addition, the dye promotes relatively rapid and complete repair of a Li(+) GB hydrogel destroyed by shearing. We used rheology to show that other planar aromatics, some cationic and one neutral dye (methylene violet), also stiffened the Li(+) GB hydrogel. Data from powder X-ray diffraction, UV, and circular dichroism spectroscopy and ThT fluorescence indicate that G4 quartets are formed by the Li(+) GB system. We observed a species in solution by (1)H NMR that was intermediate in size between monomeric gelator and NMR-invisible hydrogel. The concentration of this intermediate decreased much faster when ThT was present in solution, again showing that the dye can accelerate hydrogel formation. We propose that ThT functions as a molecular chaperone by end stacking on terminal G4-quartets and promoting the assembly of these smaller fragments into longer G4-based structures that can then provide more cross-linking sites needed for hydrogelation.

G4-quartet·M(+) borate hydrogels.

The ability to modulate the physical properties of a supramolecular hydrogel may be beneficial for biomaterial and biomedical applications. We find that guanosine (G 1), when combined with 0.5 equiv of potassium borate, forms a strong, self-supporting hydrogel with elastic moduli >10 kPa. The countercation in the borate salt (MB(OH)4) significantly alters the physical properties of the hydrogel. The gelator combination of G 1 and KB(OH)4 formed the strongest hydrogel, while the weakest system was obtained with LiB(OH)4, as judged by (1)H NMR and rheology. Data from powder XRD, (1)H double-quantum solid-state magic-angle spinning (MAS) NMR and small-angle neutron scattering (SANS) were consistent with a structural model that involves formation of borate dimers and G4·K(+) quartets by G 1 and KB(OH)4. Stacking of these G4·M(+) quartets into G4-nanowires gives a hydrogel. We found that the M(+) cation helps stabilize the anionic guanosine-borate (GB) diesters, as well as the G4-quartets. Supplementing the standard gelator mixture of G 1 and 0.5 equiv of KB(OH)4 with additional KCl or KNO3 increased the strength of the hydrogel. We found that thioflavin T fluoresces in the presence of G4·M(+) precursor structures. This fluorescence response for thioflavin T was the greatest for the K(+) GB system, presumably due to the enhanced interaction of the dye with the more stable G4·K(+) quartets. The fluorescence of thioflavin T increased as a function of gelator concentration with an increase that correlated with the system's gel point, as measured by solution viscosity.

A G4·K⁺ hydrogel stabilized by an anion.

Supramolecular hydrogels derived from natural products have promising applications in diagnostics, drug delivery, and tissue engineering. We studied the formation of a long-lived hydrogel made by mixing guanosine (G, 1) with 0.5 equiv of KB(OH)4. This ratio of borate anion to ligand is crucial for gelation as it links two molecules of 1, which facilitates cation-templated assembly of G4·K(+) quartets. The guanosine-borate (GB) hydrogel, which was characterized by cryogenic transmission electron microscopy and circular dichroism and (11)B magic-angle-spinning NMR spectroscopy, is stable in water that contains physiologically relevant concentrations of K(+). Furthermore, non-covalent interactions, such as electrostatics, π-stacking, and hydrogen bonding, enable the incorporation of a cationic dye and nucleosides into the GB hydrogel.

Supramolecular hydrogels for environmental remediation: G4-quartet gels that selectively absorb anionic dyes from water.

Binary mixtures of guanosine (G 1) and 8-aminoguanosine (8AmG 2) form stable, transparent supramolecular hydrogels with stoichiometric concentrations of either K+ or Ba2+ salts. These hydrogels selectively bind anionic dyes.

RNA Trans-Splicing Targeting Endogenous ß-Globin Pre-Messenger RNA in Human Erythroid Cells.

Sickle cell disease results from a point mutation in exon 1 of the ß-globin gene (total 3 exons). Replacing sickle ß-globin exon 1 (and exon 2) with a normal sequence by trans-splicing is a potential therapeutic strategy. Therefore, this study sought to develop trans-splicing targeting ß-globin pre-messenger RNA among human erythroid cells. Binding domains from random ß-globin sequences were comprehensively screened. Six candidates had optimal binding, and all targeted intron 2. Next, lentiviral vectors encoding RNA trans-splicing molecules were constructed incorporating a unique binding domain from these candidates, artificial 5' splice site, and γ-globin cDNA, and trans-splicing was evaluated in CD34+ cell-derived erythroid cells from healthy individuals. Lentiviral transduction was efficient, with vector copy numbers of 9.7 to 15.3. The intended trans-spliced RNA product, including exon 3 of endogenous ß-globin and γ-globin, was detected at the molecular level. Trans-splicing efficiency was improved to 0.07-0.09% by longer binding domains, including the 5' splice site of intron 2. In summary, screening was performed to select efficient binding domains for trans-splicing. Detectable levels of trans-splicing were obtained for endogenous ß-globin RNA in human erythroid cells. These methods provide the basis for future trans-splicing directed gene therapy.

Kinetics of lentiviral vector transduction in human CD34(+) cells.

Unlike cell lines, human hematopoietic stem cells (HSCs) are less efficiently transduced with HIV-1 vectors, potentially limiting this approach. To investigate which step (internalization, reverse transcription, nuclear transport, and integration) limits lentiviral transduction, we evaluated the kinetics of lentiviral transduction in human CD34(+) cells. We transduced HeLa and CD34(+) cells with self-inactivating HIV-1 vector at low and tenfold higher multiplicity of infection (MOI) and evaluated vector amounts at various time points based on the rationale that if a given step was not limiting, tenfold greater vector amounts would be obtained at the tenfold higher MOI. We observed slower internalization (>60 min), a peak in reverse transcription at 24 hours, and completion of integration at 3 days in CD34(+) cells. In HeLa cells, there were approximately tenfold greater amounts at high MOI at all time points. When compared with HeLa cells, CD34(+) cells exhibited larger differences in vector amounts between high and low MOIs at 2-6 hours and a smaller difference at 12 hours to 10 days, revealing a limitation in human CD34(+) cell transduction around 12 hours, which corresponds to reverse transcription. In serial measurements of reverse transcription at 24 hours, vector amounts did not decrease once detected among CD34(+) cells. When using an HSC expansion medium, we observed less limitation for starting reverse transcription and more efficient transduction among CD34(+) cells in vitro and in xenografted mice. These data suggest that it is the initiation of reverse transcription that limits lentiviral transduction of human CD34(+) cells. Our findings provide an avenue for optimizing human CD34(+) cell transduction.

Total body irradiation must be delivered at high dose for efficient engraftment and tolerance in a rhesus stem cell gene therapy model.

Reduced intensity conditioning (RIC) is desirable for hematopoietic stem cell (HSC) gene therapy applications. However, low gene marking was previously observed in gene therapy trials, suggesting that RIC might be insufficient for (i) opening niches for efficient engraftment and/or (ii) inducing immunological tolerance for transgene-encoded proteins. Therefore, we evaluated both engraftment and tolerance for gene-modified cells using our rhesus HSC gene therapy model following RIC. We investigated a dose de-escalation of total body irradiation (TBI) from our standard dose of 10Gy (10, 8, 6, and 4Gy), in which rhesus CD34(+) cells were transduced with a VSVG-pseudotyped chimeric HIV-1 vector encoding enhanced green fluorescent protein (GFP) (or enhanced yellow fluorescent protein (YFP)). At ~6 months after transplantation, higher-dose TBI resulted in higher gene marking with logarithmic regression in peripheral blood cells. We then evaluated immunological tolerance for gene-modified cells, and found that lower-dose TBI allowed vigorous anti-GFP antibody production with logarithmic regression, while no significant anti-VSVG antibody formation was observed among all TBI groups. These data suggest that higher-dose TBI improves both engraftment and immunological tolerance for gene-modified cells. Additional immunosuppression might be required in RIC to induce tolerance for transgene products. Our findings should be valuable for developing conditioning regimens for HSC gene therapy applications.