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1.
Parasitol Res ; 115(9): 3425-33, 2016 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-27150971

RESUMO

Hexokinase (HK) is one of the key enzymes in the glycolytic pathway that catalyzes the phosphorylation of glucose. In the present study, we cloned the HK gene from the coccidian Eimeria tenella (EtHK), expressed EtHK as a His-tagged fusion protein, and characterized its primary biochemical features. Mutagenesis confirmed that residues S159, N216, and D217 are essential or important to the EtHK catalytic activity. EtHK exhibited high affinity for D-glucose (Km = 0.67 to 0.79 mM), but was also able to utilize 2-deoxy-D-glucose (Km = 5.66 mM), D-fructose (Km = 13.76 mM), and D-mannose (Km = 25.41 mM). We also observed that quercetin and mangiferin could inhibit the EtHK enzyme activity (IC50 values = 6.52 and 85.82 µM, respectively). Among the two inhibitors, mangiferin also inhibited the growth of E. tenella in vitro (MIC50 = 0.12 µM). These observations suggest that EtHK may be explored as potential drug target, and mangiferin and its analogs may be explored for developing anti-coccidial therapeutics.


Assuntos
Eimeria tenella/enzimologia , Hexoquinase/química , Hexoquinase/genética , Proteínas de Protozoários/química , Proteínas de Protozoários/genética , Coccidiose/parasitologia , Eimeria tenella/química , Eimeria tenella/genética , Estabilidade Enzimática , Frutose/metabolismo , Glucose/metabolismo , Hexoquinase/metabolismo , Humanos , Cinética , Manose/metabolismo , Fosforilação , Proteínas de Protozoários/metabolismo
2.
BMC Microbiol ; 15: 98, 2015 May 12.
Artigo em Inglês | MEDLINE | ID: mdl-25962879

RESUMO

BACKGROUND: Malaria presents a considerable threat to public health. Histidine-rich protein 2 (HRP 2) is the major protein released into human blood upon infection by Plasmodium falciparum. In this study, we aimed to evaluate the immunogenicity of HRP 2 exon II and the efficacy of novel monoclonal antibodies (mAbs) against HRP 2 for Point-of-Care Test (POCT). METHODS: The recombinant protein was expressed in soluble form in E. coli and used to immunize mice for mAb production. Two IgG1 mAbs (1A5 and 1C10) with high affinity, specificity and sensitivity for both native and recombinant HRP 2 were selected after fusion of mouse spleen with myeloma cells. The affinity constant of 1A5 and 1C10 were 7.15 and 4.91 × 10-7 L/mol, respectively. Subsequently, an immunochromatograhic assay was used for screening of clinical samples in endemic regions of China and Myanmar. RESULTS: The immunochromatographic test retrospectively showed an overall sensitivity of 99.07%, and specificity of 100%. Sensitivity at parasite densities < 200, 200-2000, and > 2000 parasites/µL was 87.5, 98.7, and 100%, respectively. CONCLUSIONS: These results suggest that HRP 2 exon II contains immunogenic sites similar to those of the native antigen and can be used for the development of mAbs suitable for malaria diagnosis in endemic communities.


Assuntos
Anticorpos Monoclonais/imunologia , Antígenos de Protozoários/análise , Cromatografia de Afinidade/métodos , Malária Falciparum/diagnóstico , Plasmodium falciparum/isolamento & purificação , Sistemas Automatizados de Assistência Junto ao Leito , Proteínas de Protozoários/análise , Animais , Anticorpos Monoclonais/isolamento & purificação , Anticorpos Antiprotozoários/imunologia , Anticorpos Antiprotozoários/isolamento & purificação , Antígenos de Protozoários/imunologia , China , Testes Diagnósticos de Rotina/métodos , Humanos , Imunoglobulina G/imunologia , Imunoglobulina G/isolamento & purificação , Camundongos , Mianmar , Plasmodium falciparum/imunologia , Proteínas de Protozoários/imunologia , Sensibilidade e Especificidade , Fatores de Tempo
3.
Malar J ; 14: 228, 2015 May 30.
Artigo em Inglês | MEDLINE | ID: mdl-26024887

RESUMO

BACKGROUND: The low sensitivity and specificity of Plasmodium falciparum diagnostic tests pose a serious health threat to people living in endemic areas. The objective of the study was to develop a rapid assay for the detection of histidine-rich protein 2 (HRP2) of P. falciparum in whole blood by immunofluorescence chromatographic technology. METHODS: A total of 1163 positive and negative blood samples were screened. The double-antibody sandwich assay was used to establish the kit and its performance was evaluated for sensitivity, specificity, accuracy, precision, stability, and clinical effectiveness. RESULTS: The cut-off level of detection of the kit was 25 parasites/µl. Common interfering substances in human blood specimens, such as bilirubin, triglyceride and cholesterol had no significant effect on HRP2 antigen detection. The precision of the kit was run with different concentration of standard calibrators and the values were less than 10 %. The performance of this diagnostic kit in the detection of the calibrators has shown that a shelf life of about 12 months gives a more reliable result. Among clinical samples tested, the HRP2 test kit and the reference products had good coincidence rate in a parallel experiment and this test kit had a more sensitive detecting level to the target protein than the reference kits used in this study. The specificity and sensitivity for this test were 99.6 % (800/803) and 99.7 % (1160/1163), respectively. CONCLUSIONS: A novel HRP2 immunofluorescence detection method was developed in this study. Overall performance evaluation indicated that the kit has a rapid, high sensitivity and on-spot method for detecting P. falciparum.


Assuntos
Antígenos de Protozoários/isolamento & purificação , Cromatografia/métodos , Testes Diagnósticos de Rotina/métodos , Malária Falciparum/diagnóstico , Plasmodium falciparum/fisiologia , Proteínas de Protozoários/isolamento & purificação , Imunofluorescência , Sensibilidade e Especificidade
4.
Scand J Clin Lab Invest ; 75(8): 693-8, 2015.
Artigo em Inglês | MEDLINE | ID: mdl-26426850

RESUMO

OBJECTIVES: To develop a rapid, sensitive and specific assay for quantification of serum heart-type fatty acid binding protein (H-FABP) based on immunofluorescence of specific monoclonal antibodies. DESIGN AND METHODS: We generated novel H-FABP-directed monoclonal antibodies by cloning of spleen cells of mice immunized with H-FABP. Epitopes were mapped and antigen affinity was assessed by surface plasmon resonance (SPR). The H-FABP specific monoclonal antibodies were coupled to fluorescent beads and sprayed onto a nitrocellulose membrane facilitating quantification of H-FABP by immunofluorescence. Reagent cross-reactivity, interference resistance, accuracy and sensitivity were examined. A total of 103 clinical samples were used to compare the sensitivity and specificity of the new assay to a commercially available Randox kit. RESULTS: This new assay could be finished within 15 min, with sensitivity reaching 1 ng/ml. In a trial of 103 clinical serum samples, the new testing kit results were highly correlated with those from the Randox kit (R(2) = 0.9707). Using the Randox kit as the reference kit, the sensitivity of the new assay was 98.25%, and specificity was 100%. CONCLUSIONS: An immunofluorescence-based H-FABP assay employing novel monoclonal antibodies could rapidly, specifically and sensitively detect H-FABP in serum samples, providing an effective method for rapid clinical assessment of H-FABP index in the clinic.


Assuntos
Anticorpos Monoclonais Murinos/química , Proteínas de Ligação a Ácido Graxo/sangue , Animais , Ligação Competitiva , Biomarcadores/sangue , Cromatografia , Proteína 3 Ligante de Ácido Graxo , Proteínas de Ligação a Ácido Graxo/imunologia , Técnica Direta de Fluorescência para Anticorpo , Humanos , Limite de Detecção , Camundongos Endogâmicos BALB C , Isquemia Miocárdica/sangue , Ligação Proteica
5.
Mol Biol Rep ; 41(10): 6583-9, 2014 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-25024046

RESUMO

The complete mitochondrial (mt) genome sequences of Neobenedenia melleni were determined and compared with those of Benedenia seriolae and B. hoshinai. This circular genome comprises 13,270 bp and includes all 36 typical mt genes found in flatworms. Total AT content of N. melleni is 75.9 %. ATG is the most common start codon, while nad4L is initiated by GTG. All protein-coding genes are predicted to terminate with TAG and TAA. N. melleni has the trnR with a TCG anticodon, which is the same to B. seriolae but different from B. hoshinai (ACG). The mt gene arrangement of N. melleni is similar to that of B. seriolae and B. hoshinai with the exception of three translocations (trnF, trnT and trnG). The overlapped region between nad4L and nad4 was found in the N. melleni mt genome, which was also reported for the published Gyrodactylus species, but it was not found in those of B. seriolae and B. hoshinai, which are non-coding regions instead. The present study provides useful molecular characters for species or strain identification and systematic studies of this parasite.


Assuntos
Componentes Genômicos , Genoma Mitocondrial , Platelmintos/genética , Animais , Composição de Bases , Códon , DNA Mitocondrial/química , DNA Mitocondrial/genética , Ordem dos Genes , Genes de RNAr , Tamanho do Genoma , Conformação de Ácido Nucleico , Fases de Leitura Aberta , Platelmintos/classificação , RNA de Transferência/química , RNA de Transferência/genética , Recombinação Genética , Regiões não Traduzidas
6.
Front Bioeng Biotechnol ; 11: 1298890, 2023.
Artigo em Inglês | MEDLINE | ID: mdl-38283167

RESUMO

Objective: Bispecific antibodies (BsAbs) have demonstrated significant therapeutic impacts for the treatment of a broad spectrum of diseases that include oncology, auto-immune, and infectious diseases. However, the large-scale production of clinical batches of bispecific antibodies still has many challenges that include having low yield, poor stability, and laborious downstream purification processes. To address such challenges, we describe the optimization of the controlled Fab arm exchange (cFAE) process for the efficient generation of BsAbs. Methods: The process optimization of a large-scale good manufacturing practice (GMP) cFAE strategy to prepare BsAbs was based on screening the parameters of temperature, reduction, oxidation, and buffer exchange. We include critical quality standards for the reducing agent cysteamine hydrochloride. Results: This large-scale production protocol enabled the generation of bispecific antibodies with >90% exchange yield and at >95% purity. The subsequent downstream processing could use typical mAb procedures. Furthermore, we demonstrated that the bispecific generation protocol can be scaled up to ∼60 L reaction scale using parental monoclonal antibodies that were expressed in a 200 L bioreactor. Conclusion: We presented a robust development strategy for the cFAE process that can be used for a larger scale GMP BsAb production.

7.
Mol Biol Rep ; 39(8): 8115-25, 2012 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-22544610

RESUMO

The complete mitochondrial genome of Pseudochauhanea macrorchis was determined and compared with other monogenean mitochondrial genomes from GenBank. The circular genome was 15,031 bp in length and encoded 36 genes (12 protein-coding genes, two ribosomal RNAs, and 22 transfer RNAs) typically found in flatworms. Structures of the mitochondrial genome were mostly concordant with that known for Microcotyle sebastis and Polylabris halichoeres, but also contained two noted features-a gene rearrangement hot spot and the highly repetitive region (HRR) in major non-coding region (NCR). The gene rearrangement hot spot located between the cox3 and nad5 genes, including a cluster of tRNA genes, nad6 gene and one major NCR. The HRR seemed to be a unique feature of the polyopisthocotylean mitochondrial genomes. In conclusion, the present study provided new molecular data for future studies of the comparative mitochondrial genomics and also served as a resource of markers for the studies of species populations and monogenean phylogenetics.


Assuntos
Rearranjo Gênico , Genoma Mitocondrial , Platelmintos/genética , Sequências Repetitivas de Ácido Nucleico , Animais , Composição de Bases , Sequência de Bases , Códon , Dados de Sequência Molecular , Fases de Leitura Aberta , RNA Ribossômico/química , RNA Ribossômico/genética , RNA de Transferência/química , RNA de Transferência/genética , Alinhamento de Sequência
8.
Front Microbiol ; 13: 820089, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-35558126

RESUMO

In Streptococcus mutans, we find that the histidine kinase WalK possesses the longest C-terminal tail (CTT) among all 14 TCSs, and this tail plays a key role in the interaction of WalK with its response regulator WalR. We demonstrate that the intrinsically disordered CTT is characterized by a conserved tryptophan residue surrounded by acidic amino acids. Mutation in the tryptophan not only disrupts the stable interaction, but also impairs the efficient phosphotransferase and phosphatase activities of WalRK. In addition, the tryptophan is important for WalK to compete with DNA containing a WalR binding motif for the WalR interaction. We further show that the tryptophan is important for in vivo transcriptional regulation and bacterial biofilm formation by S. mutans. Moreover, Staphylococcus aureus WalK also has a characteristic CTT, albeit relatively shorter, with a conserved W-acidic motif, that is required for the WalRK interaction in vitro. Together, these data reveal that the W-acidic motif of WalK is indispensable for its interaction with WalR, thereby playing a key role in the WalRK-dependent signal transduction, transcriptional regulation and biofilm formation.

9.
Fish Shellfish Immunol ; 30(4-5): 1095-108, 2011.
Artigo em Inglês | MEDLINE | ID: mdl-21333741

RESUMO

The serum of rabbitfish (Siganus oramin) has been confirmed previously to have killing effect to Cryptocaryon irritans, an important marine ciliate protozoan that causes a disease referred to as "marine white spot disease". Herein, we find the serum of the rabbitfish also shows antibacterial activity against both gram-positive and gram-negative bacteria and has killing effect on two other parasites: Trypanosoma brucei brucei, Ichthyophthirius multifiliis. Results of scanning electron microscopy indicated that after treating with rabbitfish serum, the surface of the Staphylococcus aureus was wrinkled and pores were formed on the surface of Escherichia coli. Serum of the rabbitfish possesses a strong killing effect to Ichthyophthirius multifiliis in vitro, causing a similar effect as to C. irritans. The serum of rabbitfish also showed strong killing effect to T. b. brucei in vitro, with the minimus trypanocidal titre (MTT) only to be 1.5% in 1 h. Results of laser confocal fluorescence microscopy indicated that rabbitfish serum could also induce cell rupture of T. b. brucei. A novel antimicrobial protein (SR-LAAO) was isolated from the serum of rabbitfish by using ultrafiltration, reversed phase high performance liquid chromatography (RP-HPLC) and Native polyacrylamide gel electrophoresis (Native-PAGE). Results of gel overlay assay showed that the protein could act alone to inhibit the growth of S. aureus and E. coli. Results of western blot and automated Edman degradation showed that it was the same as the antiparasitic protein (APP) reported before to have killing effect on C. irritans. Full length cDNA sequence of the SR-LAAO was cloned. BLAST research suggested that the cDNA of SR-LAAO has a close similarity with a number of L-amino acid oxidases (LAAOs) and possesses two conserved motifs that exist in LAAOs. Combined, these results demonstrate that this protein which has antimicrobial activity to some pathogenic organisms was a novel LAAO found in the serum of rabbitfish. Immunohistochemical analysis demonstrated tissue specific expression and localization of SR-LAAO in the spleen, kidney, gill and blood of the rabbitfish, but was not found in other tissues. These results suggest that this protein may contribute considerably to the host non-specific immune defense mechanism to combat microbes of the rabbitfish and has the potency for using in future drug development.


Assuntos
Infecções Bacterianas/veterinária , Doenças dos Peixes/imunologia , Doenças dos Peixes/microbiologia , L-Aminoácido Oxidase/isolamento & purificação , Perciformes/imunologia , Sequência de Aminoácidos , Animais , Infecções Bacterianas/imunologia , Sequência de Bases , Clonagem Molecular , Doenças dos Peixes/enzimologia , Doenças dos Peixes/parasitologia , Bactérias Gram-Negativas/imunologia , Bactérias Gram-Negativas/ultraestrutura , Bactérias Gram-Positivas/imunologia , Bactérias Gram-Positivas/ultraestrutura , Imuno-Histoquímica/veterinária , L-Aminoácido Oxidase/genética , L-Aminoácido Oxidase/farmacologia , Testes de Sensibilidade Microbiana/veterinária , Microscopia Eletrônica de Varredura/veterinária , Dados de Sequência Molecular , Perciformes/sangue , Filogenia , RNA/química , RNA/genética , Reação em Cadeia da Polimerase Via Transcriptase Reversa/veterinária , Alinhamento de Sequência
10.
BMC Microbiol ; 10: 309, 2010 Dec 01.
Artigo em Inglês | MEDLINE | ID: mdl-21122131

RESUMO

BACKGROUND: Streptococcus iniae (S. iniae) is a major pathogen that causes considerable morbidity and mortality in cultured fish worldwide. The pathogen's ability to adapt to the host affects the extent of infection, hence understanding the mechanisms by which S. iniae overcomes physiological stresses during infection will help to identify potential virulence determinants of streptococcal infection. Grow S. iniae under iron-restricted conditions is one approach for identifying host-specific protein expression. Iron plays an important role in many biological processes but it has low solubility under physiological condition. Many microorganisms have been shown to be able to circumvent this nutritional limitation by forming direct contacts with iron-containing proteins through ATP-binding cassette (ABC) transporters. The ABC transporter superfamilies constitute many different systems that are widespread among living organisms with different functions, such as ligands translocation, mRNA translation, and DNA repair. RESULTS: An ABC transporter system, named as mtsABC (metal transport system) was cloned from S. iniae HD-1, and was found to be involved in heme utilization. mtsABC is cotranscribed by three downstream genes, i.e., mtsA, mtsB, and mtsC. In this study, we cloned the first gene of the mtsABC transporter system (mtsA), and purified the corresponding recombinant protein MtsA. The analysis indicated that MtsA is a putative lipoprotein which binds to heme that can serve as an iron source for the microorganism, and is expressed in vivo during Kunming mice infection by S. iniae HD-1. CONCLUSIONS: This is believed to be the first report on the cloning the ABC transporter lipoprotein from S. iniae genomic DNA. Together, our data suggested that MtsA is associated with heme, and is expressed in vivo during Kunming mice infection by S. iniae HD-1 which indicated that it can be a potential candidate for S. iniae subunit vaccine.


Assuntos
Proteínas de Bactérias/metabolismo , Proteínas de Transporte de Cátions/metabolismo , Doenças dos Peixes/microbiologia , Ferro/metabolismo , Infecções Estreptocócicas/veterinária , Streptococcus/metabolismo , Sequência de Aminoácidos , Animais , Proteínas de Bactérias/química , Proteínas de Bactérias/genética , Transporte Biológico , Proteínas de Transporte de Cátions/química , Proteínas de Transporte de Cátions/genética , Masculino , Camundongos , Dados de Sequência Molecular , Perciformes , Ligação Proteica , Alinhamento de Sequência , Infecções Estreptocócicas/microbiologia , Streptococcus/química , Streptococcus/genética
11.
Fish Shellfish Immunol ; 29(1): 32-41, 2010 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-20117218

RESUMO

The susceptibility of eight marine fish species cultured in South China were tested for infection by the parasitic ciliate, Cryptocaryon irritans, via a challenge examination and an immobilization assay. All species of fish (representing six different families) that we investigated were infected by C. irritans except the rabbitfish (Siganus oramin), which displayed resistance to C. irritans infection. The infection intensity of rabbitfish (0.92+/-0.97, p<0.05) was significantly lower while the immobilization titres of rabbitfish serum were significantly higher (44.51+/-22.98, p<0.05) than the other seven species of fish. Additionally, the serum of the rabbitfish presented a strong killing effect to C. irritans in vitro. Light microscopy, scanning electron microscopy and fluorescence microscopy confirmed that rabbitfish serum could induce the theront cilia fall off, rupture of the cell membrane because of the swell and rupture of the macronucleus. Rabbitfish serum could also induce the rupture of the trophont membrane and content efflux. Herein a novel antiparasitic protein (APP) was isolated and purified from the serum of rabbitfish (S. oramin) by using a series of salting-out, cation exchange chromatography and two step of reversed phase high performance liquid chromatography (RP-HPLC). Analysis of sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) showed that APP was a homogenous polymeric protein with an N-terminal amino acid sequence of SSVEKNLAACLRDND. Its monomeric molecular mass, determined by matrix-assisted laser desorption ionization tandem time-of-flight mass spectrometer (MALDI-TOF-TOF-MS), was found to be 61,739.87 Da. Results of homology analyses indicated that this protein was a newly discovered functional protein in the rabbitfish serum. Laser confocal fluorescence microscopy conformed that the action site of the APP was mainly on the cell membrane and nucleus of theront, which agreed with the results of light microscopy, fluorescence microscopy and scanning electron microscopy. These findings suggest that this protein may contribute considerably to the innate host defence mechanism to combat microbes of the rabbitfish.


Assuntos
Infecções por Cilióforos/veterinária , Cilióforos/imunologia , Doenças dos Peixes/parasitologia , Imunidade Inata/imunologia , Perciformes , Proteínas/isolamento & purificação , Sequência de Aminoácidos , Animais , Cilióforos/ultraestrutura , Infecções por Cilióforos/sangue , Infecções por Cilióforos/imunologia , Infecções por Cilióforos/parasitologia , Eletroforese em Gel Bidimensional/veterinária , Doenças dos Peixes/imunologia , Microscopia Eletrônica de Varredura/veterinária , Microscopia de Fluorescência/veterinária , Dados de Sequência Molecular , Proteínas/química , Proteínas/imunologia , Análise de Sequência de Proteína , Espectrometria de Massas por Ionização e Dessorção a Laser Assistida por Matriz/veterinária
12.
Sci Signal ; 13(643)2020 08 04.
Artigo em Inglês | MEDLINE | ID: mdl-32753477

RESUMO

Two-component systems (TCSs), which consist of a histidine kinase (HK) sensor and a response regulator (RR), are important for bacteria to quickly sense and respond to various environmental signals. HKs and RRs typically function as a cognate pair, interacting only with one another to transduce signaling. Precise signal transduction in a TCS depends on the specific interactions between the receiver domain (RD) of the RR and the dimerization and histidine phosphorylation domain (DHp) of the HK. Here, we determined the complex structure of KdpDE, a TCS consisting of the HK KdpD and the RR KdpE, which is responsible for K+ homeostasis. Both the RD and the DNA binding domain (DBD) of KdpE interacted with KdpD. Although the RD of KdpE and the DHp of KdpD contributed to binding specificity, the DBD mediated a distinct interaction with the catalytic ATP-binding (CA) domain of KdpD that was indispensable for KdpDE-mediated signal transduction. Moreover, the DBD-CA interface largely overlapped with that of the DBD-DNA complex, leading to competition between KdpD and its target promoter in a KdpE phosphorylation-dependent manner. In addition, the extended C-terminal tail of the CA domain was critical for stabilizing the interaction with KdpDE and for signal transduction. Together, these data provide a molecular basis for specific KdpD and KdpE interactions that play key roles in efficient signal transduction and transcriptional regulation by this TCS.


Assuntos
Proteínas de Escherichia coli/química , Potássio/metabolismo , Domínios Proteicos , Proteínas Quinases/química , Transdução de Sinais , Transativadores/química , Sítios de Ligação/genética , Cristalografia por Raios X , Escherichia coli/genética , Escherichia coli/metabolismo , Proteínas de Escherichia coli/genética , Proteínas de Escherichia coli/metabolismo , Regulação Bacteriana da Expressão Gênica , Histidina Quinase/genética , Histidina Quinase/metabolismo , Modelos Moleculares , Mutação , Regiões Promotoras Genéticas/genética , Ligação Proteica , Proteínas Quinases/genética , Proteínas Quinases/metabolismo , Transativadores/genética , Transativadores/metabolismo
13.
Biotechnol Appl Biochem ; 53(Pt 4): 247-51, 2009 Jun 22.
Artigo em Inglês | MEDLINE | ID: mdl-19327129

RESUMO

T-A cloning is the most commonly used molecular cloning technique in which T-vector is the core tool. T-vectors commonly used now are blue-white positive-selection vectors based on mechanism of alpha-complement of beta-galactose of Escherichia coli. Disadvantages of these traditional T-vectors in application include insufficient positive rate and the existence of false-positive clones, which, especially the latter, makes screening of transformant clones via colony PCR necessary. In the present study, a novel T-vector, based on the strategy of inhibiting the growth of negative transformants by means of a lethal gene and innovative design of insertion site, was developed. The innovative design of the insertion site for PCR fragments not only guarantees complete blocking of the expression of the lethal gene when PCR fragments are inserted, but also eliminates the formation of false-positive clones. All (100%) of 20 randomly chosen grown colonies were shown to be positive via colony PCR in four separate experimental T-A clonings of PCR fragments with lengths between 219 and 2100 bp. The novel T-vector developed in the present study makes colony PCR screening unnecessary, because of its extremely high efficiency of negative transformant inhibition and the mechanism for elimination of false-positive clones. Temperature (42 degrees C)-dependent positive selection greatly simplifies the procedure and lowers the cost of T-A cloning. Furthermore, it is an ideal T-vector for constructing libraries of PCR-amplified DNA fragments such as SSH (suppressive subtraction hybridization) libraries because of its zero negative background performance.


Assuntos
Clonagem Molecular/métodos , Vetores Genéticos/genética , Temperatura , Reação em Cadeia da Polimerase
14.
Bioresour Technol ; 99(17): 7923-7, 2008 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-18440806

RESUMO

The sequential statistical experimental design (Plackett-Burman, factorial, response surface and steepest ascent experiment) was applied to optimize the culture medium of nitrite oxidizing bacteria for improving the nitrite oxidizing rate. Estimated optimum medium composition of the nitrite oxidizing rate was as follows: NaHCO3, 1.86gl(-1); NaNO2, 2.04gl(-1); Na2CO3, 0.2gl(-1); NaCl, 0.2gl(-1); KH2PO4, 0.1gl(-1); MgSO4 x7H2O, 0.1gl(-1); and FeSO4 x 7H2O, 0.01gl(-1). The nitrite oxidizing rate was increased by 48.0% and reached a maximum at 859.5+/-8.4mgNO2-N/gMLSS.d as compared to 580.7+/-25.8mgNO2-N/gMLSS x d. In the field trial, 50L of nitrite oxidizing bacteria concentrate (1.99gVSS/L) with 850mgNO2-N/gMLSS x d were added to 0.6ha of the aquaculture water. Nitrite level in all treated ponds remained very low compared to the steady increase observed in all of the control ponds during 7 days.


Assuntos
Bactérias/metabolismo , Meios de Cultura , Fermentação , Nitritos/metabolismo , Análise de Variância , Animais , Aquicultura , Análise Fatorial , Oxirredução , Penaeidae , Fatores de Tempo
15.
Artigo em Inglês | MEDLINE | ID: mdl-24438309

RESUMO

The first complete mitochondrial (mt) genome of Ancyrocephalidae is reported herein. The mt genome of Tetrancistrum nebulosi was 13,392 bp in length containing 12 protein-coding genes (lacking atp8), 22 tRNA genes and 2 rRNA genes. The longest non-coding region was located between nad5 and trnG, and the A + T content was 72.4%. All tRNAs had the typical clover-leaf secondary structure except for trnS1((AGN)), trnR, trnF and trnQ. The rrnL and rrnS subunits were separated by trnC, as documented in the monopisthocotylean groups (Benedenia and Gyrodactylus species), while they were adjacent to each other in the polyopisthocotylean species (Microcotyle sebastis, Polylabris halichoeres and Pseudochauhanea macrorchis).


Assuntos
DNA Mitocondrial/genética , Genoma Mitocondrial , Trematódeos/genética , Animais , Pareamento de Bases/genética , DNA Intergênico/genética , Fases de Leitura Aberta/genética
16.
Trends Parasitol ; 21(3): 122-5, 2005 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-15734659

RESUMO

Tritrichomonas suis, a tritrichomonad of pigs, and the related species Tritrichomonas foetus, a tritrichomonad of cattle, are morphologically identical. The taxonomic relationship between these two tritrichomonads has been questioned ever since they were established as distinct species in 1843 and 1928, respectively. Here, we compare the similarities of morphology, ultrastructure, distribution, host specificity, characteristics of in vitro cultivation, immunology, biochemistry and analysis of molecular data from published sources between these two species. All data indicate that these two tritrichomonad species are identical. Thus, we propose that T. foetus and T. suis are synonyms.


Assuntos
Doenças dos Bovinos/parasitologia , Infecções Protozoárias em Animais , Doenças dos Suínos/parasitologia , Tritrichomonas/classificação , Animais , Bovinos , Interações Hospedeiro-Parasita , Filogenia , Infecções por Protozoários/parasitologia , Especificidade da Espécie , Suínos , Tritrichomonas/fisiologia , Tritrichomonas/ultraestrutura , Tritrichomonas foetus/classificação , Tritrichomonas foetus/fisiologia , Tritrichomonas foetus/ultraestrutura
17.
Artigo em Inglês | MEDLINE | ID: mdl-12174264

RESUMO

A refractile body antigen Etp28 Gene of Eimeria tenella (Guangdong Strain) sporozoites was cloned by PCR from the synthesized first strand cDNA. It has a high homology with the previously reported Etp28 gene of Merck Strain LS18. The gene was expressed through standard procedures in the modified Autographa californica nuclear polyhedrosis virus (AcMNPV-OCC(-)) expression system and large amount of heterologous fusion protein (GST-6xHis-Etp28) was obtained. The expression product was about 21.3% of the total cellular protein of an infected cell and corresponding to approximately 0.42 mg of recombinant protein per 10(6) cells. And the immunoprotective trial showed that this candidate for recombinant vaccine conferred partial protection against chicken coccidiosis.

18.
Carbohydr Polym ; 113: 463-70, 2014 Nov 26.
Artigo em Inglês | MEDLINE | ID: mdl-25256508

RESUMO

The production and purification of polysaccharide-based bioflocculants (PSBs) by Paenibacillus mucilaginosus GIM1.16 in metal ion-supplemented medium and basal medium were evaluated. Three purified PSB1-1, PSB2-1 and PSB3-1 possessed different monosaccharide composition and their molecular weights were 2.53 × 10(6), 7.77 × 10(6) and 13.2 × 10(6)Da, respectively. FT-IR spectrometry indicated the presence of hydroxyl, carboxyl and phosphate groups in the three samples. Scanning electron microscopy showed that they had linear structure. The potential of these PSBs on wastewater treatment was evaluated. Among them, PSB1-1 exhibited the best performance, as it had high flocculating activities (above 94%) at 0.5-4 mg/L and could achieve high flocculating activities (above 97%) in the kaolin suspensions of pH 3-9. PSB1-1 was the key factor that might explain the enhanced flocculating activity of the supernatant from metal ion-supplemented medium. The performance of PSB1-1 on industrial wastewater was also satisfactory. PSB1-1 might be a good candidate as bioflocculant.


Assuntos
Paenibacillus/química , Polissacarídeos/química , Águas Residuárias/química , Adsorção , Floculação , Polissacarídeos/isolamento & purificação , Purificação da Água
19.
PLoS One ; 9(3): e92306, 2014.
Artigo em Inglês | MEDLINE | ID: mdl-24647358

RESUMO

BACKGROUND: Since human infection with the novel H7N9 avian influenza virus was identified in China in March 2013, the relatively high mortality rate and possibility of human-to-human transmission have highlighted the urgent need for sensitive and specific assays for diagnosis of H7N9 infection. METHODOLOGY/PRINCIPAL FINDINGS: We developed a rapid diagnostic test for the novel avian influenza A (H7N9) virus using anti-hemagglutinin (HA) monoclonal antibodies specifically targeting H7 in an immunochromatographic assay system. The assay limit of detection was 103.5 pfu/ml or 103TCID50 of H7N9 virus. The assay specifically detected H7N9 viral isolates and recombinant HA proteins of H7 subtypes including H7N7 and H7N9, but did not react with non-H7 subtypes including H1N1, H3N2, H5N1, H5N9, and H9N2. The detection sensitivity was 59.4% (19/32) for H7N9 patients confirmed by RT-PCR. Moreover, the highest sensitivity of 61.5% (16/26) was obtained when testing H7N9 positive sputum samples while 35.7% (5/14) of nasopharyngeal swabs and 20% (2/10) of fecal samples tested positive. No false positive detection was found when testing 180 H7N9 negative samples. CONCLUSIONS/SIGNIFICANCE: Our novel rapid assay can specifically detect H7 HA antigen, facilitating rapid diagnosis for prevention and control of the on-going H7N9 epidemic.


Assuntos
Glicoproteínas de Hemaglutininação de Vírus da Influenza/imunologia , Subtipo H7N9 do Vírus da Influenza A/imunologia , China , Glicoproteínas de Hemaglutininação de Vírus da Influenza/genética , Humanos , Vírus da Influenza A Subtipo H1N1/genética , Vírus da Influenza A Subtipo H1N1/imunologia , Vírus da Influenza A Subtipo H3N2/genética , Vírus da Influenza A Subtipo H3N2/imunologia , Virus da Influenza A Subtipo H5N1/genética , Virus da Influenza A Subtipo H5N1/imunologia , Vírus da Influenza A Subtipo H7N7/genética , Vírus da Influenza A Subtipo H7N7/imunologia , Subtipo H7N9 do Vírus da Influenza A/genética , Vírus da Influenza A Subtipo H9N2/genética , Vírus da Influenza A Subtipo H9N2/imunologia , Influenza Humana
20.
J Agric Food Chem ; 60(49): 12164-9, 2012 Dec 12.
Artigo em Inglês | MEDLINE | ID: mdl-23136814

RESUMO

A truncated neutral protease I (NpI) from Aspergillus oryzae 3.042 was expressed in Pichia pastoris with a high enzyme yield of 43101 U/mL. Its optimum pH was about 8.0, and it was stable in the pH range of 5.0-9.0. Its optimum temperature was about 55 °C and retained >90% activity at 50 °C for 120 min. Recombinant NpI (rNpI) was inhibited by Cu(2+) and EDTA. Eight cleavage sites of rNpI in oxidized insulin B-chain were determined by mass spectrometry, and five of them had high hydrophobic amino acid affinity, which makes it efficient in producing antihypertensive peptide IPP from ß-casein and a potential debittering agent. The high degree of hydrolysis (DH) of rNpI to soybean protein (8.8%) and peanut protein (11.1%) compared to papain and alcalase makes it a good candidate in the processing of oil industry byproducts. The mutagenesis of H(429), H(433), and E(453) in the deduced zinc-binding motif confirmed rNpI as a gluzincin. All of these results show the great potential of rNpI to be used in the protein hydrolysis industry.


Assuntos
Aspergillus oryzae/enzimologia , Proteínas Fúngicas/metabolismo , Metaloendopeptidases/metabolismo , Pichia/genética , Arachis/química , Sequência de Bases , Clonagem Molecular , Proteínas Fúngicas/genética , Regulação da Expressão Gênica , Concentração de Íons de Hidrogênio , Hidrólise , Insulina/metabolismo , Metaloendopeptidases/genética , Dados de Sequência Molecular , Mutagênese Sítio-Dirigida , Oxirredução , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , Proteínas de Soja/metabolismo , Especificidade por Substrato , Temperatura
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