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1.
Nano Lett ; 24(40): 12650-12657, 2024 Oct 09.
Artigo em Inglês | MEDLINE | ID: mdl-39316522

RESUMO

Borophene stands out among elemental two-dimensional materials due to its extraordinary physical properties, including structural polymorphism, strong anisotropy, metallicity, and the potential for phonon-mediated superconductivity. However, confirming superconductivity in borophene experimentally has been evasive to date, mainly due to the detrimental effects of metallic substrates and its susceptibility to oxidation. In this study, we present an ab initio analysis of superconductivity in the experimentally synthesized hydrogenated ß12 borophene, which has been proven to be less prone to oxidation. Our findings demonstrate that hydrogenation significantly enhances both the stability and superconducting properties of ß12 borophene. Furthermore, we reveal that tensile strain and hole doping, achievable through various experimental methods, significantly enhance the critical temperature, reaching up to 29 K. These findings not only promote further fundamental research on superconducting borophene and its heterostructures, but also position hydrogenated borophene as a versatile platform for low-dimensional superconducting electronics.

2.
J Comput Chem ; 45(23): 1987-2000, 2024 Sep 05.
Artigo em Inglês | MEDLINE | ID: mdl-38709143

RESUMO

Quantum computers are expected to outperform classical computers for specific problems in quantum chemistry. Such calculations remain expensive, but costs can be lowered through the partition of the molecular system. In the present study, partition was achieved with range-separated density functional theory (RS-DFT). The use of RS-DFT reduces both the basis set size and the active space size dependence of the ground state energy in comparison with the use of wave function theory (WFT) alone. The utilization of pair natural orbitals (PNOs) in place of canonical molecular orbitals (MOs) results in more compact qubit Hamiltonians. To test this strategy, a basis-set independent framework, known as multiresolution analysis (MRA), was employed to generate PNOs. Tests were conducted with the variational quantum eigensolver for a number of molecules. The results show that the proposed approach reduces the number of qubits needed to reach a target energy accuracy.

3.
Small ; : e2402749, 2024 Jul 19.
Artigo em Inglês | MEDLINE | ID: mdl-39031112

RESUMO

Transition metal dichalcogenide TiSe2 exhibits a superconducting dome within a low pressure range of 2-4 GPa, which peaks with the maximal transition temperature Tc of ≈1.8 K. Here it is reported that applying high pressure induces a new superconducting state in TiSe2, which starts at ≈16 GPa with a substantially higher Tc that reaches 5.6 K at ≈21.5 GPa with no sign of decline. Combining high-throughput first-principles structure search, X-ray diffraction, and Raman spectroscopy measurements up to 30 GPa, It is found that TiSe2 undergoes a first-order structural transition from the 1T phase under ambient pressure to a new 4O phase under high pressure. Comparative ab initio calculations reveal that while the conventional phonon-mediated pairing mechanism may account for the superconductivity observed in 1T-TiSe2 under low pressure, the electron-phonon coupling of 4O-TiSe2 is too weak to induce a superconducting state whose transition temperature is as high as 5.6 K under high pressure. The new superconducting state found in pressurized TiSe2 requires further study on its underlying mechanism.

4.
Mass Spectrom Rev ; 42(3): 928-953, 2023 05.
Artigo em Inglês | MEDLINE | ID: mdl-34392555

RESUMO

Fragmentation studies of cationized amino acids and small peptides as studied using guided ion beam tandem mass spectrometry (GIBMS) are reviewed. After a brief examination of the key attributes of the GIBMS approach, results for a variety of systems are examined, compared, and contrasted. Cationization of amino acids, diglycine, and triglycine with alkali cations generally leads to dissociations in which the intact biomolecule is lost. Exceptions include most lithiated species as well as a few examples for sodiated and one example for potassiated species. Like the lithiated species, cationization by protons leads to numerous dissociation channels. Results for protonated glycine, cysteine, asparagine, diglycine, and a series of tripeptides are reviewed, along with the thermodynamic consequences that can be gleaned. Finally, the important physiological process of the deamidation of asparagine (Asn) residues is explored by the comparison of five dipeptides in which the C-terminal partner (AsnXxx) is altered. The GIBMS thermochemistry is shown to correlate well with kinetic results from solution phase studies.


Assuntos
Aminoácidos , Espectrometria de Massas em Tandem , Espectrometria de Massas em Tandem/métodos , Asparagina/química , Asparagina/metabolismo , Glicilglicina , Peptídeos , Íons
5.
Chemistry ; 30(7): e202302933, 2024 Feb 01.
Artigo em Inglês | MEDLINE | ID: mdl-37970753

RESUMO

Telluronium salts [Ar2 MeTe]X were synthesized, and their Lewis acidic properties towards a number of Lewis bases were addressed in solution by physical and theoretical means. Structural X-ray diffraction analysis of 21 different salts revealed the electrophilicity of the Te centers in their interactions with anions. Telluroniums' propensity to form Lewis pairs was investigated with OPPh3 . Diffusion-ordered NMR spectroscopy suggested that telluroniums can bind up to three OPPh3 molecules. Isotherm titration calorimetry showed that the related heats of association in 1,2-dichloroethane depend on the electronic properties of the substituents of the aryl moiety and on the nature of the counterion. The enthalpies of first association of OPPh3 span -0.5 to -5 kcal mol-1 . Study of the affinity of telluroniums for OPPh3 by state-of-the-art DFT and ab-initio methods revealed the dominant Coulombic and dispersion interactions as well as an entropic effect favoring association in solution. Intermolecular orbital interactions between [Ar2 MeTe]+ cations and OPPh3 are deemed insufficient on their own to ensure the cohesion of [Ar2 MeTe ⋅ Bn ]+ complexes in solution (B=Lewis base). Comparison of Grimme's and Tkatchenko's DFT-D4/MBD-vdW thermodynamics of formation of higher [Ar2 MeTe ⋅ Bn ]+ complexes revealed significant molecular size-dependent divergence of the two methodologies, with MBD yielding better agreement with experiment.

6.
Chemistry ; 30(56): e202402448, 2024 Oct 08.
Artigo em Inglês | MEDLINE | ID: mdl-38967476

RESUMO

This article reports the synthesis, along with structural and photophysical characterization of 2-(2'-hydroxyphenyl)benzazole derivatives functionalized with various azaheterocycles (pyridine, pyrimidine, terpyridine). These compounds show dual-state emission properties, that is intense fluorescence both in solution and in the solid-state with a range of fluorescent color going from blue to orange. Moreover, the nature of their excited state can be tuned by the presence of external stimuli such as protons or metal cations. In the absence of stimuli, these dyes show emission stemming from anionic species obtained after deprotonation (D* transition), whereas upon protonation or metal chelation, ESIPT process occurs leading to a stabilized and highly emissive K* transition. With the help of extensive ab initio calculations, we confirm that external stimuli can switch the nature of the transitions, making this series of dyes attractive candidates for the development of stimuli-responsive fluorescent ratiometric probes.

7.
Chemistry ; 30(6): e202302256, 2024 Jan 26.
Artigo em Inglês | MEDLINE | ID: mdl-37922225

RESUMO

A complete theoretical analysis using first the simple Hückel model followed by more sophisticated multi-reference calculations on a trinuclear Ni(II) complex (Tp#Ni3 HHTP), bearing the non-innocent bridging ligand HHTP3- , is carried out. The three semiquinone moieties of HHTP3- couple antiferromagnetically and lead to a single unpaired electron localized on one of the moieties. The calculated exchange coupling integrals together with the zero-field parameters allow, when varied within a certain range, reproducing the experimental data. These results are generalized for two similar other trinuclear complexes containing Ni(II) and Cu(II). The electronic structure of HHTP3- turns out to be independent of both the chemical nature and the geometry of the metal ions. We also establish a direct correlation between the geometrical and the electronic structures of the non-innocent ligand that is consistent with the results of calculations. It allows experimentalists to get insight into the magnetic behavior of this type of complexes by an analysis of their X-ray structure.

8.
Chemistry ; 30(17): e202303679, 2024 Mar 20.
Artigo em Inglês | MEDLINE | ID: mdl-38102976

RESUMO

Bonding interactions and spin-orbit coupling in the topological insulator SrAg4Sb2 are investigated using DFT with orbital projection analysis. Ag-Ag delta bonding is a key ingredient in the topological insulating state because the 4 d x y + 4 d x 2 - y 2 ${4d_{xy} + 4d_{x^2 - y^2 } }$ delta antibonding band forms a band inversion with the 5 s sigma bonding band. Spin-orbit coupling is required to lift d orbital degeneracies and lower the antibonding band enough to create the band inversion. These bonding effects are enabled by a longer-than-covalent Ag-Ag distance in the crystal lattice, which might be a structural characteristic of other transition metal based topological insulators. A simplified model of the topological bands is constructed to capture the essence of the topological insulating state in a way that may be engineered in other materials.

9.
Chemistry ; 30(27): e202304369, 2024 May 14.
Artigo em Inglês | MEDLINE | ID: mdl-38414107

RESUMO

Single-molecule toroics (SMTs), defined as a type of molecules with toroidal arrangement of magnetic moment associated with bi-stable non-magnetic ground states, are promising candidates for high-density information storage and the development of molecule based multiferroic materials with linear magneto-electric coupling and multiferroic behavior. The design and synthesis of SMTs by arranging the magnetic anisotropy axis in a circular pattern at the molecular level have been of great interest to scientists for last two decades since the first detection of the SMT behavior in the seminal Dy3 molecules. DyIII ion has long been the ideal candidate for constructing SMTs due to its Kramer ion nature as well as high anisotropy. Nevertheless, other LnIII ions such as TbIII and HoIII ions, as well as some paramagnetic transition metal ions, have also been used to construct many nontraditional SMTs. Therefore, we review the progress in the studies of SMTs based on the nontraditional perspective, ranging from the 3D topological to 1D&2D&3D polymeric SMTs, and 3d-4f to non Dy-based SMTs. We hope the understanding we provide about nontraditional SMTs will be helpful in designing novel SMTs.

10.
Chemistry ; 30(28): e202304223, 2024 May 17.
Artigo em Inglês | MEDLINE | ID: mdl-38477396

RESUMO

Superalkalis are unusual species having ionization energies lower than that of the alkali metals. These species with various applications are of great importance in chemistry due to their low ionization energies and strong reducing property. A typical superalkali contains a central electronegative core decorated with excess metal ligands. In the quest for novel superalkalis, we have designed the superalkalis HLi2, HLiNa and HNa2 using hydrogen as central electronegative atom for the first time employing high level ab initio (CCSD(T), MP2) and density functional theory (ωB97X-D) methods. The superalkalis exhibit very low ionization energies, even lower than that of cesium. Stability of these species is verified from binding energy and dissociation energy values. The superalkalis are capable of reducing SO2, NO, CO2, CO and N2 molecules by forming stable ionic complexes and therefore can be used as catalysts for the reduction or activation of systems possessing very low electron affinities. The superalkalis form stable supersalts with tailored properties when interact with a superhalogen. They also show remarkably high non-linear optical responses, hence could have industrial applications. It is hoped that this work will enrich the superalkali family and spur further theoretical and experimental research in this direction.

11.
Chemistry ; : e202402868, 2024 Oct 23.
Artigo em Inglês | MEDLINE | ID: mdl-39441801

RESUMO

Magnetic exchange coupling (J) is one of the important spin Hamiltonian parameters that control the magnetic characteristics of single-molecule magnets (SMMs). While numerous chemical methodologies have been proposed to modify ligands and control the J value, and magneto-structural correlations have been developed accordingly, altering this parameter through non-chemical means remains a challenging task. This study explores the impact of an Oriented-External Electric Field (OEEF) on over twenty lanthanide-radical complexes using Density Functional Theory (DFT) and ab initio Complete Active Space Self-Consistent Field (CASSCF) methods. Five complexes-[{(Me3Si)2N]2Gd(THF)}2(µ-η2:η2-N2)] (1), [Gd(Hbpz3)2(dtbsq)] (2), [Gd(hfac)3(IM-2py)] (3), [Gd(hfac)3(NITBzImH)] (4), and [Gd(hfac)3{2Py-NO}(H2O)] (5)-were selected for detailed analysis, revealing significant OEEF effects on magnetic exchange interactions and structural parameters. Various parameters such as bond distances, bond angles, and torsional angles were examined as a function of OEEF to establish guiding principles for molecule selection. In complexes 1, 2, and 3, OEEF influenced torsional angles and altered exchange interactions. Complex 4 demonstrated enhanced ferromagnetic coupling under OEEF, reaching a maximum J value of +5.3 cm-1. Complex 5 reveals switching the sign of JGd-rad exchange interaction from antiferromagnetic to ferromagnetic under OEEF, highlighting the potential of electric fields in designing materials with tuneable magnetic properties.

12.
Chemistry ; 30(60): e202400819, 2024 Oct 28.
Artigo em Inglês | MEDLINE | ID: mdl-39149838

RESUMO

Quantum information theory provides a powerful toolbox of descriptors that characterize many-electron systems based on quantum information patterns between open quantum systems. Despite the wealth of insights gained in the condensed matter community, the use of these descriptors to study interactions between atoms in a molecule remains limited. In this study, we develop a quantum information framework for molecules that characterizes the quantum information patterns between quantum atoms as defined in the Quantum Theory of Atoms in Molecules. We show that quantum information analyses capture key properties of quantum atoms and how they interact with their molecular environment. Additionally, we show that the presence of bond critical points can remain invariant despite large changes in the quantum information patterns between the quantum atoms. Our findings indicate that quantum information theory can shed a new light on molecular electronic structure.

13.
Chemphyschem ; 25(6): e202300861, 2024 Mar 15.
Artigo em Inglês | MEDLINE | ID: mdl-38288557

RESUMO

Recent studies have shown that graphene-supported metal clusters can enhance catalytic reactivity compared with corresponding metal clusters. In this study, the adsorptions of NH3 , H2 S, and HCN on Cu19 and defective graphene-supported Cu19 clusters are investigated using plane-wave density functional theory. The results reveal the three gas molecules can be adsorbed on three types of top sites of Cu atoms, respectively. The adsorption energies of the corresponding adsorption sites on the defective graphene-supported Cu19 clusters are all increased compared with those on the Cu19 clusters. The orbital-resolved, crystal orbital Hamilton population analysis demonstrates that the larger the integrated crystal orbital Hamilton population, the stronger the adsorption between the gas molecule and the bonded Cu atom. The center of antibonding states on the defective graphene-supported Cu19 is shifted upward relative to Fermi level compared to the corresponding one on pure Cu19 , which explains the enhanced adsorption energy on defective graphene-supported Cu19. In addition, the closer d-band center to the Fermi level on the defective graphene-supported Cu19 indicates a stronger adsorption capacity than on pure Cu19 .

14.
Chemphyschem ; : e202400274, 2024 Jul 19.
Artigo em Inglês | MEDLINE | ID: mdl-39031477

RESUMO

Against the general belief that carbonic acid is too unstable for synthesis, it was possible to synthesize the solid[1,2] as well as gas-phase carbonic acid.[3] It was suggested that solid carbonic acid might exist in Earth's upper troposphere and in the harsh environments of other solar bodies,[4] where it undergoes a cycle of synthesis, decomposition, and dimerization.[5] To provide spectroscopic data for probing the existence of extraterrestrial carbonic acid,[2,6] matrix-isolation infrared (MI-IR) spectroscopy has shown to be essential.[3,4,6-8] However, early assignments within the harmonic approximation using scaling factors impeded a full interpretation of the rather complex MI-IR spectrum of H2CO3. Recently, carbonic acid was detected in the Galactic center molecular cloud,[9] triggering new interest in the anharmonic spectrum.[10] In this regard, we substantially reassign our argon MI-IR spectra based on accurate anharmonic calculations. We calculate a four-mode potential energy surface (PES) at the explicitly correlated coupled-cluster theory using up to triple-zeta basis sets, i. e., CCSD(T)-F12/cc-pVTZ-F12. On this PES, we perform vibrational self-consistent field and configuration interaction (VSCF/VCI) calculations to obtain accurate vibrational transition frequencies and resonance analysis of the fundamentals, first overtones, and combination bands. In total, 12 new bands can be assigned, extending the spectral data for carbonic acid and thus simplifying detection in more complex environments. Furthermore, we clarify disputed assignments between the cc- and ct-conformer.

15.
Chemphyschem ; 25(19): e202400372, 2024 Oct 01.
Artigo em Inglês | MEDLINE | ID: mdl-39250431

RESUMO

Why are DNA bases stacked in a double helix structure? We combined three theoretical approaches to demonstrate how one core concept derived from quantum mechanics (Pauli repulsion) annihilates the contribution of dispersion to the π-π stacking. The helical architecture is governed by a combination of exchange and electrostatic forces, a result that is interpreted from both a computational and a biological perspective.


Assuntos
DNA , Conformação de Ácido Nucleico , Teoria Quântica , DNA/química , Eletricidade Estática
16.
Chemphyschem ; 25(16): e202400387, 2024 Aug 19.
Artigo em Inglês | MEDLINE | ID: mdl-38747620

RESUMO

The microwave spectrum of 1-cyanopropene (crotonitrile) was remeasured using two pulsed molecular jet Fourier transform microwave spectrometers operating from 2.0 to 40.0 GHz. The molecule exists in two isomer forms, E and Z, with respect to the orientation between the methyl and the cyano groups. The spectrum of the Z isomer is more intense. Due to internal rotation of the methyl group, doublets containing A and E torsional species were found for all rotational transitions. Hyperfine splittings arising from the 14N nuclear quadrupole coupling were resolved. The heavy atom structure of the Z isomer was determined by observation of 13C and 15N isotopologue spectra in natural abundances. The experimental results were supported by quantum chemistry. The complex spectral patterns were analyzed and fitted globally, and the barriers to methyl internal rotation are determined to be 478.325(28) cm-1 and 674.632(76) cm-1 for the Z and E isomers, respectively. The non-bonded intramolecular electrostatic attraction between the methyl group and the 1-cyano substituent overcomes steric hindrance, leading to higher stability of the Z isomer. The consequence is a slight opening of 3.2° of the C(1)-C(2)-C(3) angle and a radical decrease of the methyl torsional barrier in the Z isomer due to steric repulsion.

17.
Chemphyschem ; 25(4): e202300849, 2024 Feb 16.
Artigo em Inglês | MEDLINE | ID: mdl-38061993

RESUMO

Two-ring intramolecular π-electron delocalization assisted dihydrogen bonds existing in (1Z,4Z)-1,4-dipentene-3-bora-1,5-diol and its symmetrically substituted derivatives have been analysed here since the MP2/6-311++G(d,p) calculations on these systems were performed. The influence of the coexistence of two intramolecular dihydrogen bonded rings in these molecular structures on properties of intramolecular dihydrogen bonds as well as on the π-electron delocalization within these rings was investigated. The comparison with corresponding structures of typical two-ring, so-called resonance-assisted, RAHB, systems was performed. The results of calculations show that such rings' coexistence leads to the weakening of dihydrogen bonds, similarly as for the typical two-ring RAHB systems. The Quantum Theory of ''Atoms in Molecules'' (QTAIM) was also applied here to get more details about the nature of dihydrogen bonds. Correlations between dihydrogen bond strength measures and other energetic, geometrical and topological parameters were also analysed. It was found that characteristics of bond critical points as well as of ring critical points are useful to estimate the strength of intramolecular dihydrogen bonds in two-ring dihydrogen bonded systems discussed here. The Natural Bond Orbital, NBO, approach parameters are also discussed as useful ones to describe properties of dihydrogen bonded systems.

18.
Amino Acids ; 56(1): 5, 2024 Feb 01.
Artigo em Inglês | MEDLINE | ID: mdl-38300332

RESUMO

Four linear amino acids of increased separation of the carboxyl and amino groups, namely glycine (aminoacetic acid), ß-alanine (3-aminopropanoic acid), GABA (4-aminobutanoic acid) and DAVA (5-aminopentanoic acid), have been studied by quantum chemical ab initio and DFT methods including the solvent effect in order to get electronic structure and molecular descriptors, such as ionisation energy, electron affinity, molecular electronegativity, chemical hardness, electrophilicity index, dipole moment, quadrupole moment and dipole polarizability. Thermodynamic functions (zero-point energy, inner energy, enthalpy, entropy, and the Gibbs energy) were evaluated after the complete vibrational analysis at the true energy minimum provided by the full geometry optimization. Reaction Gibbs energy allows evaluating the absolute redox potentials on reduction and/or oxidation. The non-local non-additive molecular descriptors were compared along the series showing which of them behave as extensive, varying in match with the molar mass and/or separation of the carboxyl and amino groups. Amino acidic forms and zwitterionic forms of the substances were studied in parallel in order to compare their relative stability and redox properties. In total, 24 species were investigated by B3LYP/def2-TZVPD method (M1) including neutral molecules, molecular cations and molecular anions. For comparison, MP2/def2-TZVPD method (M2) with full geometry optimization and vibrational analysis in water has been applied for 12 species; analogously, for 24 substances, DLPNO-CCSD(T)/aug-cc-pVTZ method (M3) has been applied in the geometry obtained by MP2 and/or B3LYP. It was found that the absolute oxidation potential correlates with the adiabatic ionisation energy; the absolute reduction potential correlates with the adiabatic electron affinity and the electrophilicity index. In order to validate the used methodology with experimental vertical ionisation energies and vibrational spectrum obtained in gas phase, calculations were done also in vacuo.


Assuntos
Aminoácidos , Água , Ácido gama-Aminobutírico , Glicina , beta-Alanina
19.
Philos Trans A Math Phys Eng Sci ; 382(2275): 20230117, 2024 Jul 23.
Artigo em Inglês | MEDLINE | ID: mdl-38910405

RESUMO

The rich phenomenology of quantum many-body systems such as atomic nuclei is complex to interpret. Often, the behaviour (e.g. evolution with the number of constituents) of measurable/observable quantities such as binding or excitation energies can be best understood based on a simplified picture involving auxiliary quantities that are not observable, i.e. whose values vary with parameters that are internal to the theoretical construction (contrarily to measurable/observable quantities). While being useful, the simplified interpretation is thus theoretical-scheme dependent. This applies, in particular, to the so-called single-nucleon shell structure based on auxiliary effective single-particle energies (ESPEs). In this context, the present work aims at (i) recalling the way to compute ESPEs out of solutions of many-body Schrödinger's equation, (ii) illustrating the use of ESPEs within the frame of state-of-the-art ab initio calculations to interpret the outcome of a recent nuclear experiment, and (iii) demonstrating the impact of several alterations on the computation of ESPEs. While the chosen alterations constitute approximations within the ab initio scheme, they are built-in when employing other theoretical constructs at play in nuclear physics. The present considerations are thus meant to empirically illustrate variations that can be expected between ESPEs computed within different (equally valid) theoretical schemes. This article is part of the theme issue 'The liminal position of Nuclear Physics: from hadrons to neutron stars'.

20.
Nano Lett ; 23(20): 9468-9473, 2023 Oct 25.
Artigo em Inglês | MEDLINE | ID: mdl-37830499

RESUMO

Crystalline Bi4O4SeCl2 exhibits record-low 0.1 W/mK lattice thermal conductivity (κL), but the underlying transport mechanism is not yet understood. Using a theoretical framework which incorporates first-principles anharmonic lattice dynamics into a unified heat transport theory, we compute both the particle-like and glass-like components of κL in crystalline and pellet Bi4O4SeCl2 forms. The model includes intrinsic three- and four-phonon scattering processes and extrinsic defect and extended defect scattering contributing to the phonon lifetime, as well as temperature-dependent interatomic force constants linked to phonon frequency shifts and anharmonicity. Bi4O4SeCl2 displays strongly anisotropic complex crystal behavior with dominant glass-like transport along the cross-plane direction. The uncovered origin of κL underscores an intrinsic approach for designing extremely low κL materials.

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