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1.
J Biol Chem ; 299(6): 104797, 2023 06.
Artigo em Inglês | MEDLINE | ID: mdl-37156397

RESUMO

Coenzyme Q (CoQ) is an essential component of the electron transport system in aerobic organisms. CoQ10 has ten isoprene units in its quinone structure and is especially valuable as a food supplement. However, the CoQ biosynthetic pathway has not been fully elucidated, including synthesis of the p-hydroxybenzoic acid (PHB) precursor to form a quinone backbone. To identify the novel components of CoQ10 synthesis, we investigated CoQ10 production in 400 Schizosaccharomyces pombe gene-deleted strains in which individual mitochondrial proteins were lost. We found that deletion of coq11 (an S. cerevisiae COQ11 homolog) and a novel gene designated coq12 lowered CoQ levels to ∼4% of that of the WT strain. Addition of PHB or p-hydroxybenzaldehyde restored the CoQ content and growth and lowered hydrogen sulfide production of the Δcoq12 strain, but these compounds did not affect the Δcoq11 strain. The primary structure of Coq12 has a flavin reductase motif coupled with an NAD+ reductase domain. We determined that purified Coq12 protein from S. pombe displayed NAD+ reductase activity when incubated with ethanol-extracted substrate of S. pombe. Because purified Coq12 from Escherichia coli did not exhibit reductase activity under the same conditions, an extra protein is thought to be necessary for its activity. Analysis of Coq12-interacting proteins by LC-MS/MS revealed interactions with other Coq proteins, suggesting formation of a complex. Thus, our analysis indicates that Coq12 is required for PHB synthesis, and it has diverged among species.


Assuntos
NADH NADPH Oxirredutases , Proteínas de Schizosaccharomyces pombe , Schizosaccharomyces , Cromatografia Líquida , NAD/metabolismo , NADH NADPH Oxirredutases/química , NADH NADPH Oxirredutases/genética , NADH NADPH Oxirredutases/isolamento & purificação , NADH NADPH Oxirredutases/metabolismo , Schizosaccharomyces/enzimologia , Schizosaccharomyces/genética , Schizosaccharomyces/metabolismo , Proteínas de Schizosaccharomyces pombe/química , Proteínas de Schizosaccharomyces pombe/genética , Proteínas de Schizosaccharomyces pombe/isolamento & purificação , Proteínas de Schizosaccharomyces pombe/metabolismo , Espectrometria de Massas em Tandem , Ubiquinona/análogos & derivados , Ubiquinona/metabolismo
2.
Parasitol Res ; 119(2): 683-686, 2020 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-31853623

RESUMO

The microaerophilic human parasite Trichomonas vaginalis causes infections in the urogenital tract and is one of the most often sexually transmitted pathogens worldwide. Due to its anaerobic metabolism, it has to quickly remove intracellular oxygen in order to avoid deactivation of essential metabolic enzymes such as oxygen-sensitive pyruvate:ferredoxin oxidoreductase (PFOR). Two major enzyme activities which are responsible for the removal, i.e. reduction, of molecular oxygen have been identified in T. vaginalis flavin reductase, formerly designated NADPH oxidase, which indirectly reduces oxygen to hydrogen peroxide via flavin mononucleotide (FMN), and NADH oxidase which reduces oxygen to water. Flavin reductase has been identified and characterized at the gene level as well as enzymatically, but NADH oxidase has so far only been characterized enzymatically with enzyme isolated from T. vaginalis cell extracts. In this study, we identified NADH oxidase by mass spectrometry after isolation of the enzyme from gel bands positively staining for NADH oxidase activity. In strain C1 (ATCC 30001) which is known to lack NADH oxidase activity completely, the NADH oxidase gene has a deletion at position 1540 of the open reading frame leading to a frame shift and, as a consequence, to premature termination of the encoded polypeptide.


Assuntos
Complexos Multienzimáticos/genética , NADH NADPH Oxirredutases/genética , Trichomonas vaginalis/enzimologia , Trichomonas vaginalis/genética , Espectrometria de Massas , Complexos Multienzimáticos/química , Complexos Multienzimáticos/isolamento & purificação , NADH NADPH Oxirredutases/química , NADH NADPH Oxirredutases/isolamento & purificação , Fases de Leitura Aberta/genética , Deleção de Sequência
3.
J Biol Chem ; 292(24): 10123-10130, 2017 06 16.
Artigo em Inglês | MEDLINE | ID: mdl-28411200

RESUMO

F420H2-dependent enzymes reduce a wide range of substrates that are otherwise recalcitrant to enzyme-catalyzed reduction, and their potential for applications in biocatalysis has attracted increasing attention. Thermobifida fusca is a moderately thermophilic bacterium and holds high biocatalytic potential as a source for several highly thermostable enzymes. We report here on the isolation and characterization of a thermostable F420: NADPH oxidoreductase (Tfu-FNO) from T. fusca, the first F420-dependent enzyme described from this bacterium. Tfu-FNO was heterologously expressed in Escherichia coli, yielding up to 200 mg of recombinant enzyme per liter of culture. We found that Tfu-FNO is highly thermostable, reaching its highest activity at 65 °C and that Tfu-FNO is likely to act in vivo as an F420 reductase at the expense of NADPH, similar to its counterpart in Streptomyces griseus We obtained the crystal structure of FNO in complex with NADP+ at 1.8 Å resolution, providing the first bacterial FNO structure. The overall architecture and NADP+-binding site of Tfu-FNO were highly similar to those of the Archaeoglobus fulgidus FNO (Af-FNO). The active site is located in a hydrophobic pocket between an N-terminal dinucleotide binding domain and a smaller C-terminal domain. Residues interacting with the 2'-phosphate of NADP+ were probed by targeted mutagenesis, indicating that Thr-28, Ser-50, Arg-51, and Arg-55 are important for discriminating between NADP+ and NAD+ Interestingly, a T28A mutant increased the kinetic efficiency >3-fold as compared with the wild-type enzyme when NADH is the substrate. The biochemical and structural data presented here provide crucial insights into the molecular recognition of the two cofactors, F420 and NAD(P)H by FNO.


Assuntos
Actinobacteria/enzimologia , Proteínas de Bactérias/metabolismo , Modelos Moleculares , NADH NADPH Oxirredutases/metabolismo , NADP/metabolismo , Sequência de Aminoácidos , Substituição de Aminoácidos , Proteínas de Bactérias/química , Proteínas de Bactérias/genética , Proteínas de Bactérias/isolamento & purificação , Sítios de Ligação , Domínio Catalítico , Sequência Conservada , Cristalografia por Raios X , Estabilidade Enzimática , Temperatura Alta/efeitos adversos , Concentração de Íons de Hidrogênio , Interações Hidrofóbicas e Hidrofílicas , Mutagênese Sítio-Dirigida , Mutação , NADH NADPH Oxirredutases/química , NADH NADPH Oxirredutases/genética , NADH NADPH Oxirredutases/isolamento & purificação , NADP/química , Conformação Proteica , Proteínas Recombinantes/química , Proteínas Recombinantes/isolamento & purificação , Proteínas Recombinantes/metabolismo , Alinhamento de Sequência , Homologia de Sequência de Aminoácidos , Homologia Estrutural de Proteína
4.
Arch Biochem Biophys ; 656: 38-45, 2018 10 15.
Artigo em Inglês | MEDLINE | ID: mdl-30205085

RESUMO

Thioredoxin glutathione reductase (TGRsec) is a multi-domain flavoprotein that plays a principal role in redox homeostasis maintenance. We have previously demonstrated the role of selenocysteine in maintaining TGRsec structure-function, but the role of the glutaredoxin (Grx) domain and FAD is still unclear. In the present study, the urea-induced unfolding of recombinant Fasciola gigantica TGRsec (FgTGRsec) and its N-terminal truncated variant (ΔNTD-FgTGRsec) were examined to understand the role of the Grx domain and FAD in the stabilization of FgTGRsec and ΔNTD-FgTGRsec. Our results showed that both proteins underwent unfolding in a three state manner. First, the protein undergoes a conformational transition rendering a near-native state with no FAD bound, and then full unfolding of the apo-dimer occurs without dissociation. The Grx domain stabilized the global FgTGRsec structure and positively regulated FgTGRsec activity, and alteration in the FAD microenvironment was directly proportional to the loss of thioredoxin reductase (TrxR) and glutathione reductase activities. Based on these results, we concluded that the Grx domain stabilizes the full-length FgTGRsec protein for efficient catalysis. Thus, we suggest that in platyhelminth parasites, during evolution, the Grx domain merged with the TrxR domain to confer higher catalytic activity and provide additional structural stability to the full-length TGR.


Assuntos
Flavina-Adenina Dinucleotídeo/química , Glutarredoxinas/química , Proteínas de Helminto/química , Complexos Multienzimáticos/química , NADH NADPH Oxirredutases/química , Domínios Proteicos , Animais , Catálise , Ácido Ditionitrobenzoico/metabolismo , Fasciola/enzimologia , Flavina-Adenina Dinucleotídeo/metabolismo , Glutarredoxinas/genética , Glutarredoxinas/isolamento & purificação , Glutarredoxinas/metabolismo , Proteínas de Helminto/genética , Proteínas de Helminto/isolamento & purificação , Proteínas de Helminto/metabolismo , Complexos Multienzimáticos/genética , Complexos Multienzimáticos/isolamento & purificação , Complexos Multienzimáticos/metabolismo , Mutação , NADH NADPH Oxirredutases/genética , NADH NADPH Oxirredutases/isolamento & purificação , NADH NADPH Oxirredutases/metabolismo , NADP/metabolismo , Ligação Proteica , Conformação Proteica/efeitos dos fármacos , Estabilidade Proteica , Desdobramento de Proteína/efeitos dos fármacos , Tiorredoxinas/química , Tiorredoxinas/genética , Tiorredoxinas/isolamento & purificação , Tiorredoxinas/metabolismo , Triptofano/química , Ureia/química
5.
Mol Pharm ; 15(8): 3069-3078, 2018 08 06.
Artigo em Inglês | MEDLINE | ID: mdl-29897765

RESUMO

Leishmaniasis, Chagas disease, and sleeping sickness affect millions of people worldwide and lead to the death of about 50 000 humans per year. These diseases are caused by the kinetoplastids Leishmania, Trypanosoma cruzi, and Trypanosoma brucei, respectively. These parasites share many general features, including gene conservation, high amino acid identity among proteins, the presence of subcellular structures as glycosomes and the kinetoplastid, and genome architecture, that may make drug development family specific, rather than species-specific, i.e., on the basis of the inhibition of a common, conserved parasite target. However, no optimal molecular targets or broad-spectrum drugs have been identified to date to cure these diseases. Here, the LeishBox from GlaxoSmithKline high-throughput screening, a 192-molecule set of best antileishmanial compounds, based on 1.8 million compounds, was used to identify specific inhibitors of a validated Leishmania target, trypanothione reductase (TR), while analyzing in parallel the homologous human enzyme glutathione reductase (GR). We identified three specific highly potent TR inhibitors and performed docking on the TR solved structure, thereby elucidating the putative molecular basis of TR inhibition. Since TRs from kinetoplastids are well conserved, and these compounds inhibit the growth of Leishmania, Trypanosoma cruzi, and Trypanosoma brucei, the identification of a common validated target may lead to the development of potent antikinetoplastid drugs.


Assuntos
Antiprotozoários/farmacologia , Infecções por Euglenozoa/tratamento farmacológico , Kinetoplastida/efeitos dos fármacos , NADH NADPH Oxirredutases/antagonistas & inibidores , Animais , Antiprotozoários/uso terapêutico , Descoberta de Drogas/métodos , Infecções por Euglenozoa/parasitologia , Ensaios de Triagem em Larga Escala/métodos , Humanos , Kinetoplastida/genética , Kinetoplastida/metabolismo , Simulação de Acoplamento Molecular , NADH NADPH Oxirredutases/genética , NADH NADPH Oxirredutases/isolamento & purificação , NADH NADPH Oxirredutases/metabolismo , Proteínas Recombinantes/genética , Proteínas Recombinantes/isolamento & purificação , Proteínas Recombinantes/metabolismo , Alinhamento de Sequência , Homologia de Sequência de Aminoácidos , Bibliotecas de Moléculas Pequenas/farmacologia
6.
Biochim Biophys Acta Gen Subj ; 1862(6): 1306-1316, 2018 06.
Artigo em Inglês | MEDLINE | ID: mdl-29526505

RESUMO

The thiol-disulfide redox metabolism in platyhelminth parasites depends entirely on a single selenocysteine (Sec) containing flavoenzyme, thioredoxin glutathione reductase (TGR) that links the classical thioredoxin (Trx) and glutathione (GSH) systems. In the present study, we investigated the catalytic and structural properties of different variants of Fasciola gigantica TGR to understand the role of Sec. The recombinant full-length Sec containing TGR (FgTGRsec), TGR without Sec (FgTGR) and TGRsec without the N-terminal glutaredoxin (Grx) domain (∆NTD-FgTGRsec) were purified to homogeneity. Biochemical studies revealed that Sec597 is responsible for higher thioredoxin reductase (TrxR) and glutathione reductase (GR) activity of FgTGRsec. The N-terminal Grx domain was found to positively regulate the DTNB-based TrxR activity of FgTGRsec. The FgTGRsec was highly sensitive to inhibition by auranofin (AF). The structure of FgTGR was modeled, and the inhibitor AF was docked, and binding sites were identified. Unfolding studies suggest that all three proteins are highly cooperative molecules since during GdnHCl-induced denaturation, a monophasic unfolding of the proteins without stabilization of any intermediate is observed. The Cm for GdnHCl induced unfolding of FgTGR was higher than FgTGRsec and ∆NTD-FgTGRsec suggesting that FgTGR without Sec was more stable in solution than the other protein variants. The free energy of stabilization for the proteins was also determined. To our knowledge, this is also the first report on unfolding and stability analysis of any TGR.


Assuntos
Fasciola/enzimologia , Fígado/parasitologia , Complexos Multienzimáticos/química , Complexos Multienzimáticos/metabolismo , NADH NADPH Oxirredutases/química , NADH NADPH Oxirredutases/metabolismo , Selenocisteína/química , Selenocisteína/metabolismo , Animais , Sítios de Ligação , Bovinos , Glutationa/metabolismo , Fígado/enzimologia , Modelos Moleculares , Simulação de Acoplamento Molecular , Complexos Multienzimáticos/isolamento & purificação , NADH NADPH Oxirredutases/isolamento & purificação , Oxirredução , Ligação Proteica , Termodinâmica
7.
BMC Microbiol ; 17(1): 126, 2017 05 25.
Artigo em Inglês | MEDLINE | ID: mdl-28545445

RESUMO

BACKGROUND: Nitroreductases, NAD(P)H dependent flavoenzymes, are found in most of bacterial species. Even if Enterococcus faecalis strains seems to present such activity because of their sensitivity to nitrofurans, no enzyme has been described. Nitroreductases were separated of others reductases due to their capacity to reduce nitro compounds. They are further classified based on their preference in cofactor: NADH and/or NADPH. However, recently, azoreductases have been studied for their strong activity on nitro compounds, especially nitro pro-drugs. This result suggests a crossing in azo and nitro reductase activities. For the moment, no nitroreductase was demonstrated to possess azoreductase activity. But due to sequence divergence and activity specificity linked to substrates, activity prediction is not evident and biochemical characterisation remains necessary. Identifying enzymes active on these two classes of compounds: azo and nitro is of interest to consider a common physiological role. RESULTS: Four putative nitroreductases, EF0404, EF0648, EF0655 and EF1181 from Enterococcus faecalis V583 were overexpressed as his-tagged recombinant proteins in Escherichia coli and purified following a native or a denaturing/renaturing protocol. EF0648, EF0655 and EF1181 showed nitroreductase activity and their cofactor preferences were in agreement with their protein sequence phylogeny. EF0404 showed both nitroreductase and azoreductase activity. Interestingly, the biochemical characteristics (substrate and cofactor specificity) of EF0404 resembled the properties of the known azoreductase AzoA. But its sequence matched within nitroreductase group, the same as EF0648. CONCLUSIONS: We here demonstrate nitroreductase activity of the putative reductases identified in the Enterococcus faecalis V583 genome. We identified the first nitroreductase able to reduce directly an azo compound, while its protein sequence is close to others nitroreductases. Consequently, it highlights the difficulty in classifying these enzymes solely on the basis of protein sequence alignment and hereby the necessity to experimentally demonstrate the activity. The results provide additional data to consider a broader functionality of these reductases.


Assuntos
Enterococcus faecalis/enzimologia , NADH NADPH Oxirredutases/isolamento & purificação , NADH NADPH Oxirredutases/metabolismo , Nitrorredutases/isolamento & purificação , Nitrorredutases/metabolismo , Sequência de Aminoácidos , Compostos Azo/metabolismo , DNA Bacteriano/genética , Enterococcus faecalis/genética , Ensaios Enzimáticos , Escherichia coli/genética , Vetores Genéticos , Genoma Bacteriano , NAD/metabolismo , NADH NADPH Oxirredutases/classificação , NADH NADPH Oxirredutases/genética , NADP/metabolismo , Nitrorredutases/classificação , Nitrorredutases/genética , Oxirredução , Oxirredutases/metabolismo , Filogenia , Alinhamento de Sequência , Especificidade por Substrato
8.
Biochemistry ; 54(45): 6815-29, 2015 Nov 17.
Artigo em Inglês | MEDLINE | ID: mdl-26506002

RESUMO

In probing the oxygen reactivity of an Enterococcus faecalis NADH oxidase (Nox; O2 → 2H2O) C42S mutant lacking the Cys42-sulfenic acid (Cys42-SOH) redox center, we provided direct evidence of a C(4a)-peroxyflavin intermediate in the oxidative half-reaction and also described a conformational or chemical change that is rate-limiting for full reoxidation of the homodimer. In this work, the Nox from Streptococcus pyogenes (SpyNox) has been expressed and crystallized, and the overoxidized wild-type [Cys44-SOH → Cys44-sulfinic acid (Cys44-SO2H)] and C44S mutant enzyme structures have been refined at 2.0 and 2.15 Å, respectively. We show that azide binds to the two-electron reduced wild-type (EH2) enzyme and to the mutant enzyme in solution, but with a significantly higher affinity for the mutant protein. The spectral course of the titration with the SpyNox EH2 form clearly indicates progressive displacement of the Cys44-S(-) → FAD charge-transfer interaction. An azide soak with C44S Nox crystals led to the structure of the complex, as refined at 2.10 Å. The active-site N3(-) ligand is proximal to the Ser44 and His11 side chains, and a significant shift in the Ser44 side chain also appears. This provides an attractive explanation for the azide-induced loss of charge-transfer absorbance seen with the wild-type EH2 form and also permits accommodation of a C(4a)-peroxyflavin structural model. The conformation of Ser44 and the associated helical element, and the resulting steric accommodation, appear to be linked to the conformational change described in the E. faecalis C42S Nox oxidative half-reaction.


Assuntos
Proteínas de Bactérias/química , Flavinas/química , Complexos Multienzimáticos/química , NADH NADPH Oxirredutases/química , Streptococcus pyogenes/enzimologia , Sequência de Aminoácidos , Azidas/metabolismo , Azidas/farmacologia , Proteínas de Bactérias/antagonistas & inibidores , Proteínas de Bactérias/genética , Proteínas de Bactérias/isolamento & purificação , Domínio Catalítico , Cristalografia por Raios X , Cisteína/química , Enterococcus faecalis/enzimologia , Modelos Moleculares , Simulação de Dinâmica Molecular , Dados de Sequência Molecular , Complexos Multienzimáticos/antagonistas & inibidores , Complexos Multienzimáticos/genética , Complexos Multienzimáticos/isolamento & purificação , NADH NADPH Oxirredutases/antagonistas & inibidores , NADH NADPH Oxirredutases/genética , NADH NADPH Oxirredutases/isolamento & purificação , Oxirredução , Oxirredutases/química , Peroxidases/química , Conformação Proteica , Proteínas Recombinantes de Fusão/química , Alinhamento de Sequência , Homologia de Sequência de Aminoácidos , Especificidade da Espécie , Streptococcus pyogenes/genética , Relação Estrutura-Atividade
9.
Appl Microbiol Biotechnol ; 99(5): 2431-9, 2015 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-25343980

RESUMO

Reduction of azo dye methyl red coupled with aerobic respiration by growing cultures of Klebsiella oxytoca GS-4-08 was investigated. In liquid media containing dye and 0.6 % glucose in a mineral salts base, 100 mg l(-1) of the dye are completely removed in 3 h under shaking conditions. The dye cannot be aerobically decolorized by strain GS-4-08 without extra carbon sources, indicating a co-metabolism process. Higher initial dye concentration prolonged the lag phase of the cell growth, but final cell concentrations of each batches reached a same level with range from 6.3 to 7.6 mg l(-1) after the dye adaption period. This strain showed stronger dye tolerance and decolorization ability than many reported strains. Furthermore, a new intracellular oxygen-insensitive azoreductase was isolated from this strain, and the specific activity of enzyme was 0.846 and 0.633 U mg(-1) protein in the presence of NADH and NADPH, respectively. N,N dimethyl-p-phenylenediamine and anthranilic acid were stoichiometrically released from MR dye, indicating the breakage of azo bonds accounts for the intracellular decolorization. Combining the characteristics of azoreductase, the stoichiometry of EMP, and TCA cycle, the electron transfer chain theory of aerobic respiration, and the possible mechanism of aerobic respiration coupled with azo reduction by K. oxytoca GS-4-08 are proposed. This study is expected to provide a sound theoretical basis for the development of the K. oxytoca strain in aerobic process for azo dye containing wastewaters.


Assuntos
Compostos Azo/metabolismo , Metabolismo Energético , Klebsiella oxytoca/metabolismo , Aerobiose , Biotransformação , Meios de Cultura/química , Glucose/metabolismo , Cinética , Klebsiella oxytoca/crescimento & desenvolvimento , Redes e Vias Metabólicas , NAD/metabolismo , NADH NADPH Oxirredutases/isolamento & purificação , NADH NADPH Oxirredutases/metabolismo , NADP/metabolismo , Nitrorredutases , Oxirredução , Fenilenodiaminas/metabolismo , ortoaminobenzoatos/metabolismo
10.
Exp Parasitol ; 149: 65-73, 2015 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-25541385

RESUMO

Thioredoxin glutathione reductases (TGRs) (EC 1.8.1.9) were purified to homogeneity from the cytosolic (cTsTGR) and mitochondrial (mTsTGR) fractions of Taenia solium, the agent responsible for neurocysticercosis, one of the major central nervous system parasitic diseases in humans. TsTGRs had a relative molecular weight of 132,000, while the corresponding value per subunit obtained under denaturing conditions, was of 62,000. Specific activities for thioredoxin reductase and glutathione reductase substrates for both TGRs explored were in the range or lower than values obtained for other platyhelminths and mammalian TGRs. cTsTGR and mTsTGR also showed hydroperoxide reductase activity using hydroperoxide as substrate. Km(DTNB) and Kcat(DTNB) values for cTsTGR and mTsTGR (88 µM and 1.9 s(-1); 45 µM and 12.6 s(-1), respectively) and Km(GSSG) and Kcat(GSSG) values for cTsTGR and mTsTGR (6.3 µM and 0.96 s(-1); 4 µM and 1.62 s(-1), respectively) were similar to or lower than those reported for mammalian TGRs. Mass spectrometry analysis showed that 12 peptides from cTsTGR and seven from mTsTGR were a match for gi|29825896 thioredoxin glutathione reductase [Echinococcus granulosus], confirming that both enzymes are TGRs. Both T. solium TGRs were inhibited by the gold compound auranofin, a selective inhibitor of thiol-dependent flavoreductases (I50 = 3.25, 2.29 nM for DTNB and GSSG substrates, respectively for cTsTGR; I50 = 5.6, 25.4 nM for mTsTGR toward the same substrates in the described order). Glutathione reductase activity of cTsTGR and mTsTGR exhibited hysteretic behavior with moderate to high concentrations of GSSG; this result was not observed either with thioredoxin, DTNB or NADPH. However, the observed hysteretic kinetics was suppressed with increasing amounts of both parasitic TGRs. These data suggest the existence of an effective substitute which may account for the lack of the detoxification enzymes glutathione reductase and thioredoxin reductase in T. solium, as has been described for very few other platyhelminths.


Assuntos
Complexos Multienzimáticos/isolamento & purificação , NADH NADPH Oxirredutases/isolamento & purificação , Taenia solium/enzimologia , Sequência de Aminoácidos , Animais , Auranofina/farmacologia , Cromatografia de Afinidade , Cromatografia DEAE-Celulose , Cysticercus/enzimologia , Citosol/enzimologia , Eletroforese em Gel de Poliacrilamida , Inibidores Enzimáticos/farmacologia , Concentração de Íons de Hidrogênio , Cinética , Mitocôndrias/enzimologia , Complexos Multienzimáticos/antagonistas & inibidores , Complexos Multienzimáticos/química , Complexos Multienzimáticos/metabolismo , NADH NADPH Oxirredutases/antagonistas & inibidores , NADH NADPH Oxirredutases/química , NADH NADPH Oxirredutases/metabolismo , Neurocisticercose/parasitologia , Alinhamento de Sequência , Suínos , Espectrometria de Massas em Tandem , Temperatura
11.
Biotechnol Lett ; 36(1): 127-31, 2014 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-24068503

RESUMO

Azo dyes and nitro-aromatic compounds are the largest group of pollutants released in the environment as industrial wastes. They create serious health and environmental problems. Azoreductases catalyze the reduction of azo dyes and nitro compounds to their respective amines. AN azoreductase was purified up to 12-fold from Lysinibacillus sphaericus using ion-exchange and size exclusion chromatography. It was optimally active at pH 7.4 and 75 °C. It was stable at 70 °C for 30 min. The purified enzyme utilized NADH rather than NADPH as an electron donor to reduce substrates. The molecular weight of the purified enzyme was ~29 kDa. The enzyme also acted as nitroreductase and could selectively reduce the nitro group of 2-nitrophenol, 4-nitrobenzoic acid, 2-nitro-benzaldehyde and 3-nitrophenol. Reduction products of these compounds were identified by IR and NMR.


Assuntos
Compostos Azo/metabolismo , Bacillaceae/enzimologia , NADH NADPH Oxirredutases/metabolismo , Nitrocompostos/metabolismo , Compostos Azo/análise , Biotransformação , Concentração de Íons de Hidrogênio , NAD , NADH NADPH Oxirredutases/química , NADH NADPH Oxirredutases/isolamento & purificação , NADP , Nitrocompostos/análise , Nitrorredutases , Temperatura
12.
Int J Mol Sci ; 14(6): 12843-52, 2013 Jun 19.
Artigo em Inglês | MEDLINE | ID: mdl-23783279

RESUMO

Primitive proteins are proposed to have utilized organic cofactors more frequently than transition metals in redox reactions. Thus, an experimental validation on whether a protein constituted solely by early amino acids and an organic cofactor can perform electron transfer activity is an urgent challenge. In this paper, by substituting "late amino acids (C, F, M, T, W, and Y)" with "early amino acids (A, L, and V)" in a flavodoxin, we constructed a flavodoxin mutant and evaluated its characteristic properties. The major results showed that: (1) The flavodoxin mutant has structural characteristics similar to wild-type protein; (2) Although the semiquinone and hydroquinone flavodoxin mutants possess lower stability than the corresponding form of wild-type flavodoxin, the redox potential of double electron reduction Em,7 (fld) reached -360 mV, indicating that the flavodoxin mutant constituted solely by early amino acids can exert effective electron transfer activity.


Assuntos
Aminoácidos/metabolismo , Megasphaera/enzimologia , Mutagênese/genética , NADH NADPH Oxirredutases/metabolismo , Dicroísmo Circular , Fluorescência , Cinética , Proteínas Mutantes/isolamento & purificação , Proteínas Mutantes/metabolismo , Mutação/genética , NADH NADPH Oxirredutases/isolamento & purificação , Oxirredução , Proteínas Recombinantes/isolamento & purificação
13.
Prep Biochem Biotechnol ; 43(7): 649-67, 2013.
Artigo em Inglês | MEDLINE | ID: mdl-23768111

RESUMO

Pseudomonas oleovorans PAMD_1 produced an intracellular azoreductase as the more prominent enzyme that reduces the azo bridge during the azo dye decolorization process. In order to optimize the expression of azoreductase, statistically based experiments were applied. Eleven significant factors were screened on decolorization activity using Plackett-Burman design. Dye, NADH, glucose, and peptone were identified as having highest positive influence on the decolorization activity. Central composite design of response surface methodology was employed for the concerted effect of these four factors on decolorization activity. This method showed that the optimum medium containing dye (200 mg L(-1)), NADH (1.14 mM), glucose (2.07 g L(-1)), and peptone (6.44 g L(-1)) for the decolorization of Orange II up to 87% in 48 hr. The applied methodology was validated through the adequacy and accuracy of the overall experiments, and the results proved that the applied methods were most effective. Further, the enzyme was purified ninefold with 16% yield by anion-exchange chromatography and a specific activity of 26 U mg(-1). The purified enzyme with a molecular mass of 29,000 Da gave a single band on sodium dodecyl sulfate (SDS) gel, and the degradation products sulfanilic acid and 1-amino-2-napthol of Orange II by azoreductase were analyzed by using an ultraviolet-visible (UV-Vis) spectrophotometer and hish-performance liquid chromatography (HPLC).


Assuntos
Biodegradação Ambiental , NADH NADPH Oxirredutases/química , NADH NADPH Oxirredutases/isolamento & purificação , Pseudomonas oleovorans/enzimologia , Compostos Azo/síntese química , Compostos Azo/química , Benzenossulfonatos/síntese química , Benzenossulfonatos/química , Corantes/química , Corantes/isolamento & purificação , Humanos , Cinética , NADH NADPH Oxirredutases/metabolismo , Nitrorredutases
14.
J Environ Sci (China) ; 25 Suppl 1: S169-71, 2013 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-25078824

RESUMO

When using stable enzyme genes from a thermophile to create a biosensor in Escherichia coli, it is vital that these genes be overexpressed in order to provide a sufficient supply of enzymes. In this study, overexpression of the NADH oxidase (Nox) gene from the thermophile Deinococcus geothermalis was successfully achieved with the aim of creating a stable biosensor active at room temperatures. To do so, modification of 10 nucleotides, GAAATTAACT, upstream of the start codon of the Nox gene was necessary.


Assuntos
Deinococcus/enzimologia , Deinococcus/genética , Escherichia coli/genética , Genes Bacterianos , Complexos Multienzimáticos/genética , NADH NADPH Oxirredutases/genética , Sequência de Bases , Eletroforese em Gel de Poliacrilamida , Histidina/metabolismo , Dados de Sequência Molecular , Complexos Multienzimáticos/isolamento & purificação , NADH NADPH Oxirredutases/isolamento & purificação , Oligopeptídeos/metabolismo
15.
Anaerobe ; 18(2): 229-34, 2012 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-22182443

RESUMO

Azo dyes are used widely in the textile, pharmaceutical, cosmetic and food industries as colorants and are often sources of environmental pollution. There are many microorganisms that are able to reduce azo dyes by use of an azoreductase enzyme. It is through the reduction of the azo bonds of the dyes that carcinogenic metabolites are produced thereby a concern for human health. The field of research on azoreductases is growing, but there is very little information available on azoreductases from strict anaerobic bacteria. In this study, the azoreductase gene was identified in Clostridium perfringens, a pathogen that is commonly found in the human intestinal tract. C. perfringens shows high azoreductase activity, especially in the presence of the common dye Direct Blue 15. A gene that encodes for a flavoprotein was isolated and expressed in Escherichia coli, and further purified and tested for azoreductase activity. The azoreductase (known as AzoC) was characterized by enzymatic reaction assays using different dyes. AzoC activity was highest in the presence of two cofactors, NADH and FAD. A strong cofactor effect was shown with some dyes, as dye reduction occurred without the presence of the AzoC (cofactors alone). AzoC was shown to perform best at a pH of 9, at room temperature, and in an anaerobic environment. Enzyme kinetics studies suggested that the association between enzyme and substrate is strong. Our results show that AzoC from C. perfringens has azoreductase activity.


Assuntos
Clostridium perfringens/enzimologia , NADH NADPH Oxirredutases/genética , NADH NADPH Oxirredutases/metabolismo , Compostos Azo/metabolismo , Clonagem Molecular , Clostridium perfringens/genética , Coenzimas/metabolismo , Corantes/metabolismo , Estabilidade Enzimática , Escherichia coli/genética , Flavina-Adenina Dinucleotídeo/metabolismo , Expressão Gênica , Humanos , Concentração de Íons de Hidrogênio , Cinética , NAD/metabolismo , NADH NADPH Oxirredutases/química , NADH NADPH Oxirredutases/isolamento & purificação , Nitrorredutases , Temperatura
16.
Biochem Biophys Res Commun ; 412(1): 104-8, 2011 Aug 19.
Artigo em Inglês | MEDLINE | ID: mdl-21802408

RESUMO

Phenylbutanone raspberry ketone, accumulating in the mature fruits of raspberry (Rubus idaeus), imparts the characteristic aroma to the fruits. Here we describe the isolation and characterization of raspberry ketone/zingerone synthase 1 (RZS1), which catalyzed the NADPH-dependent reduction of 4-hydroxybenzalacetone and 3-methoxy-4-hydroxybenzalacetone to raspberry ketone and zingerone (the latter not found in raspberry), respectively. Its apparent K(m) values for 4-hydroxybenzalacetone and NADPH were 88 µM and 202 µM, respectively. RZS1 preferred 4-hydroxybenzalacetone to 3-methoxy-4-hydroxybenzalacetone as a substrate by a factor of 1.7, and showed a 6-fold preference for 4-hydroxybenzalacetone over p-coumaraldehyde, and no activity for coniferaldehyde. Expression analysis of the RZS1 gene throughout the plant revealed that its transcript level was highest in mature fruits. We conclude that RZS1 is responsible for hydrogenation of the α,ß-unsaturated double bond of phenylbutenones, the final step of the raspberry ketone biosynthesis, in the raspberry fruits.


Assuntos
Butanonas/metabolismo , Frutas/enzimologia , Guaiacol/análogos & derivados , NADH NADPH Oxirredutases/química , Proteínas de Plantas/química , Rosaceae/enzimologia , Butanonas/química , Catálise , Guaiacol/química , Guaiacol/metabolismo , Hidrogenação , NADH NADPH Oxirredutases/isolamento & purificação , Fenóis/metabolismo , Proteínas de Plantas/isolamento & purificação
17.
Biosci Biotechnol Biochem ; 75(10): 2063-5, 2011.
Artigo em Inglês | MEDLINE | ID: mdl-21979095

RESUMO

Fe(III)-EDTA reductase was purified from Bacillus sp. B-3 isolated as a Fe(III)-EDTA-degrading bacterium. The purified enzyme showed a single protein band corresponding to a molecular mass of 19 kDa on SDS-PAGE, and had FMN as cofactor. It was alkali-thermostable. Its N-terminal amino acid sequence was identical with that of NADPH azoreductase from several species of Bacillus.


Assuntos
Bacillus/enzimologia , NADH NADPH Oxirredutases/isolamento & purificação , NADH NADPH Oxirredutases/metabolismo , Eletroforese em Gel de Poliacrilamida , Concentração de Íons de Hidrogênio , Especificidade por Substrato , Temperatura
18.
Appl Environ Microbiol ; 76(17): 5892-901, 2010 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-20639368

RESUMO

Equol is a metabolite produced from daidzein by enteric microflora, and it has attracted a great deal of attention because of its protective or ameliorative ability against several sex hormone-dependent diseases (e.g., menopausal disorder and lower bone density), which is more potent than that of other isoflavonoids. We purified a novel NADP(H)-dependent daidzein reductase (L-DZNR) from Lactococcus strain 20-92 (Lactococcus 20-92; S. Uchiyama, T. Ueno, and T. Suzuki, international patent WO2005/000042) that is involved in the metabolism of soy isoflavones and equol production and converts daidzein to dihydrodaidzein. Partial amino acid sequences were determined from purified L-DZNR, and the gene encoding L-DZNR was cloned. The nucleotide sequence of this gene consists of an open reading frame of 1,935 nucleotides, and the deduced amino acid sequence consists of 644 amino acids. L-DZNR contains two cofactor binding motifs and an 4Fe-4S cluster. It was further suggested that L-DZNR was an NAD(H)/NADP(H):flavin oxidoreductase belonging to the old yellow enzyme (OYE) family. Recombinant histidine-tagged L-DZNR was expressed in Escherichia coli. The recombinant protein converted daidzein to (S)-dihydrodaidzein with enantioselectivity. This is the first report of the isolation of an enzyme related to daidzein metabolism and equol production in enteric bacteria.


Assuntos
Isoflavonas/metabolismo , Lactococcus/enzimologia , NADH NADPH Oxirredutases/genética , NADH NADPH Oxirredutases/metabolismo , Sequência de Aminoácidos , Clonagem Molecular , Coenzimas/metabolismo , Equol , Escherichia coli/genética , Escherichia coli/metabolismo , Lactococcus/genética , Dados de Sequência Molecular , NADH NADPH Oxirredutases/isolamento & purificação , Oxirredução , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , Alinhamento de Sequência , Análise de Sequência de DNA , Homologia de Sequência de Aminoácidos
19.
Appl Microbiol Biotechnol ; 87(2): 625-33, 2010 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-20221759

RESUMO

Two alkaline keratinases-I and II secreted by Bacillus halodurans PPKS-2 were purified and characterized. Both the keratinases were purified using ammonium sulfate, DEAE-Sephadex followed by Sephadex G-200 column chromatography. The purification was 21.5-fold and 11.17% yield for keratinase-I and 23.7-fold with yield 18.46 for keratinase-II and its molecular weights 30 and 66 kDa. Both purified enzymes were relatively stable over a broad pH range 7.0-13.0 and optimally active at pH 11.0 and 60-70 degrees C. Keratinase-II was found to be more stable at 70 degrees C for 3 h and retained 100% of its activity, whereas keratinase-I lost 10% activity. Keratinase-I had high keratin disulfide reductase activity with low keratinase activity whereas keratinase-II had high keratinase activity with low keratin disulfide reductase activity. Keratinase activities of both the enzymes were completely inhibited by PMSF at 1 mM, whereas keratin disulfide reductase activity of keratinase-I was not affected. Enzymes were active and stable in the presence of the surfactants, bleaching agents (20% H(2)O(2)), commercial detergents (1%), and SDS (20%). Both the enzymes were partially sequenced and found that keratinase-I and II had a homology with disulfide reductases and serine type of proteases, respectively.


Assuntos
Bacillus/enzimologia , NADH NADPH Oxirredutases/química , NADH NADPH Oxirredutases/isolamento & purificação , Peptídeo Hidrolases/química , Peptídeo Hidrolases/isolamento & purificação , Sequência de Aminoácidos , Bacillus/química , Bacillus/genética , Dissulfetos/química , Dissulfetos/metabolismo , Estabilidade Enzimática , Dados de Sequência Molecular , Peso Molecular , NADH NADPH Oxirredutases/genética , NADH NADPH Oxirredutases/metabolismo , Peptídeo Hidrolases/genética , Peptídeo Hidrolases/metabolismo , Especificidade por Substrato , Temperatura
20.
Appl Microbiol Biotechnol ; 86(5): 1431-8, 2010 May.
Artigo em Inglês | MEDLINE | ID: mdl-19997911

RESUMO

The gene encoding an FMN-dependent NADH azoreductase, AzrG, from thermophilic Geobacillus stearothermophilus was cloned and functionally expressed in recombinant Escherichia coli. Purified recombinant AzrG is a homodimer of 23 kDa and bore FMN as a flavin cofactor. The optimal temperature of AzrG was 85 degrees C for the degradation of Methyl Red (MR). AzrG remained active for 1 h at 65 degrees C and for 1 month at 30 degrees C, demonstrating both superior thermostability and long-term stability of the enzyme. AzrG efficiently decolorized MR, Ethyl Red at 30 degrees C. Furthermore, the enzyme exhibited a wide-range of degrading activity towards several tenacious azo dyes, such as Acid Red 88, Orange I, and Congo Red. These results suggested the sustainable utilization of G. stearothermophilus as an azo-degrading strain for AzrG carrying whole-cell wastewater treatments for azo pollutants under high temperature conditions.


Assuntos
Geobacillus stearothermophilus/enzimologia , NADH NADPH Oxirredutases/genética , Compostos Azo/metabolismo , Dicroísmo Circular , Clonagem Molecular , Coenzimas/metabolismo , Estabilidade Enzimática , Escherichia coli/genética , Mononucleotídeo de Flavina/metabolismo , Geobacillus stearothermophilus/genética , NAD/metabolismo , NADH NADPH Oxirredutases/isolamento & purificação , NADH NADPH Oxirredutases/metabolismo , Nitrorredutases , Especificidade por Substrato
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