Group-based variant calling leveraging next-generation supercomputing for large-scale whole-genome sequencing studies.

Standish, Kristopher A; Carland, Tristan M; Lockwood, Glenn K; Pfeiffer, Wayne; Tatineni, Mahidhar; Huang, C Chris; Lamberth, Sarah; Cherkas, Yauheniya; Brodmerkel, Carrie; Jaeger, Ed; Smith, Lance; Rajagopal, Gunaretnam; Curran, Mark E; Schork, Nicholas J

Standish, Kristopher A; Carland, Tristan M; Lockwood, Glenn K; Pfeiffer, Wayne; Tatineni, Mahidhar; Huang, C Chris; Lamberth, Sarah; Cherkas, Yauheniya; Brodmerkel, Carrie; Jaeger, Ed; Smith, Lance; Rajagopal, Gunaretnam; Curran, Mark E; Schork, Nicholas J.

Afiliação

Standish KA; Biomedical Sciences Graduate Program, University of California, San Diego, Gilman Drive, La Jolla, 92092, CA, USA. kstandis@ucsd.edu.
Carland TM; Human Biology, J. Craig Venter Institute, 4120 Capricorn Lane, La Jolla, 92092, CA, USA. kstandis@ucsd.edu.
Lockwood GK; Human Biology, J. Craig Venter Institute, 4120 Capricorn Lane, La Jolla, 92092, CA, USA. carlandt@gmail.com.
Pfeiffer W; San Diego Supercomputer Center, University of California, San Diego, Gilman Drive, La Jolla, 92092, CA, USA. glennklockwood@gmail.com.
Tatineni M; San Diego Supercomputer Center, University of California, San Diego, Gilman Drive, La Jolla, 92092, CA, USA. pfeiffer@sdsc.edu.
Huang CC; San Diego Supercomputer Center, University of California, San Diego, Gilman Drive, La Jolla, 92092, CA, USA. mahidhar@sdsc.edu.
Lamberth S; Systems Pharmacology & Biomarkers (Immunology), Janssen R&D LLC, Springhouse, PA, USA. CHuang4@its.jnj.com.
Cherkas Y; Systems Pharmacology & Biomarkers (Immunology), Janssen R&D LLC, Springhouse, PA, USA. slambert@its.jnj.com.
Brodmerkel C; Systems Pharmacology & Biomarkers (Immunology), Janssen R&D LLC, Springhouse, PA, USA. ycherka@its.jnj.com.
Jaeger E; Systems Pharmacology & Biomarkers (Immunology), Janssen R&D LLC, Springhouse, PA, USA. cbrodmer@its.jnj.com.
Smith L; Systems Pharmacology & Biomarkers (Immunology), Janssen R&D LLC, Springhouse, PA, USA. ejaeger@its.jnj.com.
Rajagopal G; R&D IT, Janssen R&D LLC, Springhouse, PA, USA. ejaeger@its.jnj.com.
Curran ME; Systems Pharmacology & Biomarkers (Immunology), Janssen R&D LLC, Springhouse, PA, USA. lsmith10@its.jnj.com.
Schork NJ; R&D IT, Janssen R&D LLC, Springhouse, PA, USA. lsmith10@its.jnj.com.

BMC Bioinformatics ; 16: 304, 2015 Sep 22.

Article em En | MEDLINE | ID: mdl-26395405

Assuntos

Computadores; Genoma Humano; Genômica/métodos; Sequenciamento de Nucleotídeos em Larga Escala/métodos; Polimorfismo de Nucleotídeo Único/genética; Análise de Sequência de DNA/métodos; Software; Interpretação Estatística de Dados; Humanos

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Texto completo: 1 Base de dados: MEDLINE Assunto principal: Software / Computadores / Genoma Humano / Análise de Sequência de DNA / Polimorfismo de Nucleotídeo Único / Genômica / Sequenciamento de Nucleotídeos em Larga Escala Limite: Humans Idioma: En Revista: BMC Bioinformatics Assunto da revista: INFORMATICA MEDICA Ano de publicação: 2015 Tipo de documento: Article País de afiliação: Estados Unidos

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