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Accurate cytogenetic biodosimetry through automated dicentric chromosome curation and metaphase cell selection.
Liu, Jin; Li, Yanxin; Wilkins, Ruth; Flegal, Farrah; Knoll, Joan H M; Rogan, Peter K.
Afiliação
  • Liu J; Department of Biochemistry, Schulich School of Medicine and Dentistry, University of Western Ontario, London, ON, N6A 5C1, Canada.
  • Li Y; Cytognomix Inc., London, ON, N5X 3X5, Canada.
  • Wilkins R; Consumer and Clinical Radiation Protection Bureau, Health Canada, Ottawa, ON, K1A 1C1, Canada.
  • Flegal F; Canadian Nuclear Laboratories Radiobiology & Health, Chalk River, ON, K0J 1J0, Canada.
  • Knoll JHM; Cytognomix Inc., London, ON, N5X 3X5, Canada.
  • Rogan PK; Department of Pathology and Laboratory Medicine, Schulich School of Medicine and Dentistry, University of Western Ontario, London, ON, N6A 5C1, Canada.
F1000Res ; 6: 1396, 2017.
Article em En | MEDLINE | ID: mdl-29026522
ABSTRACT
Accurate digital image analysis of abnormal microscopic structures relies on high quality images and on minimizing the rates of false positive (FP) and negative objects in images. Cytogenetic biodosimetry detects dicentric chromosomes (DCs) that arise from exposure to ionizing radiation, and determines radiation dose received based on DC frequency. Improvements in automated DC recognition increase the accuracy of dose estimates by reclassifying FP DCs as monocentric chromosomes or chromosome fragments. We also present image segmentation methods to rank high quality digital metaphase images and eliminate suboptimal metaphase cells. A set of chromosome morphology segmentation methods selectively filtered out FP DCs arising primarily from sister chromatid separation, chromosome fragmentation, and cellular debris. This reduced FPs by an average of 55% and was highly specific to these abnormal structures (≥97.7%) in three samples. Additional filters selectively removed images with incomplete, highly overlapped, or missing metaphase cells, or with poor overall chromosome morphologies that increased FP rates. Image selection is optimized and FP DCs are minimized by combining multiple feature based segmentation filters and a novel image sorting procedure based on the known distribution of chromosome lengths. Applying the same image segmentation filtering procedures to both calibration and test samples reduced the average dose estimation error from 0.4 Gy to <0.2 Gy, obviating the need to first manually review these images. This reliable and scalable solution enables batch processing for multiple samples of unknown dose, and meets current requirements for triage radiation biodosimetry of high quality metaphase cell preparations.
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Texto completo: 1 Base de dados: MEDLINE Idioma: En Revista: F1000Res Ano de publicação: 2017 Tipo de documento: Article País de afiliação: Canadá

Texto completo: 1 Base de dados: MEDLINE Idioma: En Revista: F1000Res Ano de publicação: 2017 Tipo de documento: Article País de afiliação: Canadá