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A new algorithm for high-resolution reconstruction of single particles by electron microscopy.
Sorzano, C O S; Vargas, J; de la Rosa-Trevín, J M; Jiménez, A; Maluenda, D; Melero, R; Martínez, M; Ramírez-Aportela, E; Conesa, P; Vilas, J L; Marabini, R; Carazo, J M.
Afiliação
  • Sorzano COS; Centro Nac. Biotecnología (CSIC), 28049 Cantoblanco, Madrid, Spain; Univ. San Pablo - CEU, Campus Urb. Montepríncipe, 28668 Boadilla del Monte, Madrid, Spain. Electronic address: coss@cnb.csic.es.
  • Vargas J; Dept. Anatomy and Cell Biology, McGill Univ., Montreal, Canada.
  • de la Rosa-Trevín JM; SciLife Lab, Stockholm, Sweden.
  • Jiménez A; Centro Nac. Biotecnología (CSIC), 28049 Cantoblanco, Madrid, Spain.
  • Maluenda D; Centro Nac. Biotecnología (CSIC), 28049 Cantoblanco, Madrid, Spain.
  • Melero R; Centro Nac. Biotecnología (CSIC), 28049 Cantoblanco, Madrid, Spain.
  • Martínez M; Centro Nac. Biotecnología (CSIC), 28049 Cantoblanco, Madrid, Spain.
  • Ramírez-Aportela E; Centro Nac. Biotecnología (CSIC), 28049 Cantoblanco, Madrid, Spain.
  • Conesa P; Centro Nac. Biotecnología (CSIC), 28049 Cantoblanco, Madrid, Spain.
  • Vilas JL; Centro Nac. Biotecnología (CSIC), 28049 Cantoblanco, Madrid, Spain.
  • Marabini R; Univ. Autónoma de Madrid, 28049 Cantoblanco, Madrid, Spain.
  • Carazo JM; Centro Nac. Biotecnología (CSIC), 28049 Cantoblanco, Madrid, Spain.
J Struct Biol ; 204(2): 329-337, 2018 11.
Article em En | MEDLINE | ID: mdl-30145327
ABSTRACT
The Map Challenge organized by the Electron Microscopy Data Bank has prompted the development of an Xmipp high resolution reconstruction protocol (which we will refer to as highres) that is integrated in the software platform Scipion. In this work we describe the details of the image angular alignment and map reconstruction steps in our new method. This algorithm is similar to the standard projection matching approach with some important modifications, especially in the area of detecting significant features in the reconstructed volume. We show that the new method is able to produce higher resolution maps than the current de facto standard as measured by the Fourier Shell Correlation, the Monogenic Local Resolution and EMRinger.
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Texto completo: 1 Base de dados: MEDLINE Assunto principal: Microscopia Eletrônica Tipo de estudo: Prognostic_studies Idioma: En Revista: J Struct Biol Assunto da revista: BIOLOGIA MOLECULAR Ano de publicação: 2018 Tipo de documento: Article

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Microscopia Eletrônica Tipo de estudo: Prognostic_studies Idioma: En Revista: J Struct Biol Assunto da revista: BIOLOGIA MOLECULAR Ano de publicação: 2018 Tipo de documento: Article