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Construction of a Cuproptosis-Related Gene Signature for Predicting Prognosis in Gastric Cancer.
Hu, Yongli; Du, Yan; Qiu, Zhisheng; Bai, Pengwei; Bai, Zhaozhao; Zhu, Chenglou; Wang, Junhong; Liang, Tong; Da, Mingxu.
Afiliação
  • Hu Y; The First Clinical Medical College of Lanzhou University, Lanzhou University, Lanzhou, China.
  • Du Y; The First Clinical Medical College of Lanzhou University, Lanzhou University, Lanzhou, China.
  • Qiu Z; Department of Oncology Surgery, Gansu Provincial Hospital, Lanzhou, China.
  • Bai P; Clinical Medicine College, Ningxia Medical University, Yinchuan, China.
  • Bai Z; Clinical Medicine College, Ningxia Medical University, Yinchuan, China.
  • Zhu C; The First Clinical Medical College of Lanzhou University, Lanzhou University, Lanzhou, China.
  • Wang J; The First Clinical Medical College of Lanzhou University, Lanzhou University, Lanzhou, China.
  • Liang T; The First Clinical Medical College of Lanzhou University, Lanzhou University, Lanzhou, China.
  • Da M; The First Clinical Medical College of Lanzhou University, Lanzhou University, Lanzhou, China. ldyy_damx@lzu.edu.cn.
Biochem Genet ; 62(1): 40-58, 2024 Feb.
Article em En | MEDLINE | ID: mdl-37243753
This study aimed to develop and validate a cuproptosis-related gene signature for the prognosis of gastric cancer. The data in TCGA GC TPM format from UCSC were extracted for analysis, and GC samples were randomly divided into training and validation groups. Pearson correlation analysis was used to obtain cuproptosis-related genes co-expressed with 19 Cuproptosis genes. Univariate Cox and Lasso regression analyses were used to obtain cuproptosis-related prognostic genes. Multivariate Cox regression analysis was used to construct the final prognostic risk model. The risk score curve, Kaplan-Meier survival curves, and ROC curve were used to evaluate the predictive ability of Cox risk model. Finally, the functional annotation of the risk model was obtained through enrichment analysis. Then, a six-gene signature was identified in the training cohort and verified among all cohorts using Cox regression analyses and Kaplan-Meier plots, demonstrating its independent prognostic significance for gastric cancer. In addition, ROC analysis confirmed the significant predictive potential of this signature for the prognosis of gastric cancer. Functional enrichment analysis was mainly related to cell-matrix function. Therefore, a new cuproptosis-related six-gene signature (ACLY, FGD6, SERPINE1, SPATA13, RANGAP1, and ADGRE5) was constructed for the prognosis of gastric cancer, allowing for tailored prediction of outcome and the formulation of novel therapeutics for gastric cancer patients.
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Texto completo: 1 Base de dados: MEDLINE Assunto principal: Neoplasias Gástricas Tipo de estudo: Prognostic_studies / Risk_factors_studies Limite: Humans Idioma: En Revista: Biochem Genet Ano de publicação: 2024 Tipo de documento: Article País de afiliação: China

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Neoplasias Gástricas Tipo de estudo: Prognostic_studies / Risk_factors_studies Limite: Humans Idioma: En Revista: Biochem Genet Ano de publicação: 2024 Tipo de documento: Article País de afiliação: China