Improvement of cool-season food legumes for adaptation to intercropping systems: breeding faba bean for intercropping with durum wheat as a case study.

Although the transition toward a more sustainable agricultural system is sparking the interest of scientists and farmers around the globe, breeding programs are still focusing on optimizing cultivars intended for the monoculture system, and most cultivars available on the market are not suitable for intercropping. The incorporation of versatile cool-season food legumes (CSFLs) in the intercropping system is a promising way toward more diversified and sustainable cropping systems. However, as the selection of good-performing cultivars under sole cropping does not always lead to a good performance in intercropping, the development of an alternative breeding scheme for intercropping is now a necessity. The case study of faba bean-wheat intercropping was used to select for traits associated with better performance of faba bean, resulting in identifying the combined grain yield, 100-seed weight, number of pods per plant, and canopy height as key traits for faba bean-wheat intercropping suitability. Incorporating these traits in the breeding programs would be the cornerstone of the prospective transition.

Assessing the Stability of Herbicide-Tolerant Lentil Accessions (Lens culinaris Medik.) under Diverse Environments.

Assessing the adaptability and stability of herbicide-tolerant lentil accessions to two broad-spectrum post-emergence herbicides in multi-environment trials has become a must in a breeding program to improve its selection. The adaptability and stability of 42 herbicide-tolerant lentil accessions were investigated using five stability parameters under eight different environments. Significant Genotype-Environment (GE) interaction was found for days to flowering (DFLR), days to maturity (DMAT), and seed yield per plant (SY). The analyzed stability parameters such as Cultivar superiority, Finlay-Wilkinson, Shukla, Static Stability, and Wricke's Ecovalence ranked the tested accessions differently, confirming the importance of using a combination of stability parameters when evaluating the performance of a group of accessions. GGE biplot of the SY trait accounted for 60.79% of sums of squares of the GE interaction and showed that cool and high rainfall environments are ideal for testing the agronomic performance of tolerant accessions. The GGE biplot of SY showed that IG4605(19), IG195(6), and IG156635(12) were specifically adapted to one mega environment, whereas IG70056(38) was identified as a superior line having a high and stable yield. These lines should be included in lentil crossing programs to develop herbicide-tolerant cultivars adapted to diverse environments.

Genetic Dissection of Heat Stress Tolerance in Faba Bean (Vicia faba L.) Using GWAS.

Heat waves are expected to become more frequent and intense, which will impact faba bean cultivation globally. Conventional breeding methods are effective but take considerable time to achieve breeding goals, and, therefore, the identification of molecular markers associated with key genes controlling heat tolerance can facilitate and accelerate efficient variety development. We phenotyped 134 accessions in six open field experiments during summer seasons at Terbol, Lebanon, at Hudeiba, Sudan, and at Central Ferry, WA, USA from 2015 to 2018. These accessions were genotyped using genotyping by sequencing (GBS), and 10,794 high quality single nucleotide polymorphisms (SNPs) were discovered. These accessions were clustered in one diverse large group, although several discrete groups may exist surrounding it. Fifteen lines belonging to different botanical groups were identified as tolerant to heat. SNPs associated with heat tolerance using single-trait (ST) and multi-trait (MT) genome-wide association studies (GWASs) showed 9 and 11 significant associations, respectively. Through the annotation of the discovered significant SNPs, we found that SNPs from transcription factor helix-loop-helix bHLH143-like S-adenosylmethionine carrier, putative pentatricopeptide repeat-containing protein At5g08310, protein NLP8-like, and photosystem II reaction center PSB28 proteins are associated with heat tolerance.

Adaptability and Stability of Faba Bean (Vicia faba L.) Accessions under Diverse Environments and Herbicide Treatments.

The adaptability and stability of 37 faba bean (Vicia faba L.) accessions with different levels of tolerance to metribuzin or imazethapyr was assessed across 12 season-location-herbicide experiments. Significant Genotype x environment (GE) interaction was found for the days to flowering (DFLR), plant height (PLHT) and grain yield (GY). Performance and stability of the accessions regarding PLHT and GY were assessed using four different stability parameters: cultivar superiority, static stability, Wricke's eco-valence and Finlay and Wilkinson's regression model. The stability parameters ranked these genotypes differently suggesting that PLHT and GY stability should be assessed not only on a single or a few stability parameters but on a combination of them. GGE biplot analysis indicated that the environments representing metribuzin treatment at Marchouch 2014-2015 and the non-treated treatment at Terbol 2018-2019 are the ideal environments for evaluating faba bean genotypes. GGE biplots showed herbicide tolerant accession IG12983 with simultaneous average PLHT, GY and stability across the environments. The performance of other tolerant accessions, namely IG13945, IG13906, IG106453, FB2648, and FB1216 was less stable but superior under specific mega environments. Therefore, utilizing these accessions in faba bean breeding programs would help broaden the adaptability to diverse locations-season-herbicide treatments.

Genomic regions associated with herbicide tolerance in a worldwide faba bean (Vicia faba L.) collection.

Weeds represent one of the major constraints for faba bean crop. The identification of molecular markers associated with key genes imparting tolerance to herbicides can facilitate and fasten the efficient and effective development of herbicide tolerant cultivars. We phenotyped 140 faba bean genotypes in three open field experiments at two locations in Lebanon and Morocco against three herbicide treatments (T1 metribuzin 250 g ai/ha; T2 imazethapyr 75 g ai/ha; T3 untreated) and one in greenhouse where T1 and T3 were applied. The same set was genotyped using genotyping by sequencing (GBS) which yield 10,794 high quality single nucleotide polymorphisms (SNPs). ADMIXTURE software was used to infer the population structure which revealed two ancestral subpopulations. To identify SNPs associated with phenological and yield related traits under herbicide treatments, Single-trait (ST) and Multi-trait (MT) Genome Wide Association Studies (GWAS) were fitted using GEMMA software, showing 10 and 14 highly significant associations, respectively. Genomic sequences containing herbicide tolerance associated SNPs were aligned against the NCBI database using BLASTX tool using default parameters to annotate candidate genes underlying the causal variants. SNPs from acidic endochitinase, LRR receptor-like serine/threonine-protein kinase RCH1, probable serine/threonine-protein kinase NAK, malate dehydrogenase, photosystem I core protein PsaA and MYB-related protein P-like were significantly associated with herbicide tolerance traits.