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1.
Rev Sci Instrum ; 94(1): 013302, 2023 Jan 01.
Artigo em Inglês | MEDLINE | ID: mdl-36725568

RESUMO

The Quite Intense Kinetics Reflectometer (QIKR) will be a general-purpose, horizontal-sample-surface neutron reflectometer. Reflectometers measure the proportion of an incident probe beam reflected from a surface as a function of wavevector (momentum) transfer to infer the distribution and composition of matter near an interface. The unique scattering properties of neutrons make this technique especially useful in the study of soft matter, biomaterials, and materials used in energy storage. Exploiting the increased brilliance of the Spallation Neutron Source Second Target Station, QIKR will collect specular and off-specular reflectivity data faster than the best existing such machines. It will often be possible to collect complete specular reflectivity curves using a single instrument setting, enabling "cinematic" operation, wherein the user turns on the instrument and "films" the sample. Samples in time-dependent environments (e.g., temperature, electrochemical, or undergoing chemical alteration) will be observed in real time, in favorable cases with frame rates as fast as 1 Hz. Cinematic data acquisition promises to make time-dependent measurements routine, with time resolution specified during post-experiment data analysis. This capability will be deployed to observe such processes as in situ polymer diffusion, battery electrode charge-discharge cycles, hysteresis loops, and membrane protein insertion into lipid layers.

2.
Biophys J ; 98(12): 3035-43, 2010 Jun 16.
Artigo em Inglês | MEDLINE | ID: mdl-20550916

RESUMO

The outer membrane protein OmcA is an 85 kDa decaheme c-type cytochrome located on the surface of the dissimilatory metal-reducing bacterium Shewanella oneidensis MR-1. It is assumed to mediate shuttling of electrons to extracellular acceptors that include solid metal oxides such as hematite (alpha-Fe(2)O(3)). No information is yet available concerning OmcA structure in physiologically relevant conditions such as aqueous environments. We purified OmcA and characterized its solution structure by small angle x-ray scattering (SAXS), and its interaction at the hematite-water interface by neutron reflectometry. SAXS showed that OmcA is a monomer that adopts a flat ellipsoidal shape with an overall dimension of 34 x 90 x 65 A(3). To our knowledge, we obtained the first direct evidence that OmcA undergoes a redox state-dependent conformational change in solution whereby reduction decreases the overall length of OmcA by approximately 7 A (the maximum dimension was 96 A for oxidized OmcA, and 89 A for NADH and dithionite-reduced OmcA). OmcA was also found to physically interact with electron shuttle molecules such as flavin mononucleotide, resulting in the formation of high-molecular-weight assemblies. Neutron reflectometry showed that OmcA forms a well-defined monomolecular layer on hematite surfaces, where it assumes an orientation that maximizes its contact area with the mineral surface. These novel insights into the molecular structure of OmcA in solution, and its interaction with insoluble hematite and small organic ligands, demonstrate the fundamental structural bases underlying OmcA's role in mediating redox processes.


Assuntos
Citocromos c/química , Citocromos c/metabolismo , Compostos Férricos/metabolismo , Heme , Difração de Nêutrons , Espalhamento a Baixo Ângulo , Difração de Raios X , Antraquinonas/metabolismo , Antraquinonas/farmacologia , Compostos Férricos/farmacologia , Flavinas/metabolismo , Flavinas/farmacologia , Ligantes , Modelos Moleculares , Ácido Nitrilotriacético/análogos & derivados , Ácido Nitrilotriacético/metabolismo , Ácido Nitrilotriacético/farmacologia , Oxirredução , Conformação Proteica/efeitos dos fármacos , Shewanella/enzimologia , Soluções , Relação Estrutura-Atividade , Propriedades de Superfície , Água/metabolismo
3.
Chem Phys ; 345(2-3): 133-151, 2008.
Artigo em Inglês | MEDLINE | ID: mdl-19132140

RESUMO

Neutron radiation offers significant advantages for the study of biological molecular structure and dynamics. A broad and significant effort towards instrumental and methodological development to facilitate biology experiments at neutron sources worldwide is reviewed.

4.
J Res Natl Inst Stand Technol ; 98(1): 47-58, 1993.
Artigo em Inglês | MEDLINE | ID: mdl-28053457

RESUMO

Over the last 10 years, neutron reflectivity has emerged as a powerful technique for the investigation of surface and interfacial phenomena in many different fields. In this paper, a short review of some of the work on neutron reflectivity and grazing-angle diffraction as well as a description of the current and planned neutron rcflectometers at NIST is presented. Specific examples of the characterization of magnetic, superconducting, and polymeric surfaces and interfaces are included.

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