Towards predicting the encoding capability of MR fingerprinting sequences.

Sequence optimization and appropriate sequence selection is still an unmet need in magnetic resonance fingerprinting (MRF). The main challenge in MRF sequence design is the lack of an appropriate measure of the sequence's encoding capability. To find such a measure, three different candidates for judging the encoding capability have been investigated: local and global dot-product-based measures judging dictionary entry similarity as well as a Monte Carlo method that evaluates the noise propagation properties of an MRF sequence. Consistency of these measures for different sequence lengths as well as the capability to predict actual sequence performance in both phantom and in vivo measurements was analyzed. While the dot-product-based measures yielded inconsistent results for different sequence lengths, the Monte Carlo method was in a good agreement with phantom experiments. In particular, the Monte Carlo method could accurately predict the performance of different flip angle patterns in actual measurements. The proposed Monte Carlo method provides an appropriate measure of MRF sequence encoding capability and may be used for sequence optimization.

Retrospective image correction in the presence of nonlinear temporal magnetic field changes using multichannel navigator echoes.

Spatio-temporal magnetic field changes in the brain caused by breathing or body movements can lead to image artifacts. This is especially a problem in T(2)(*)-weighted sequences. With the acquisition of an extra echo (navigator), it is possible to measure the magnetic field change induced frequency offset for a given slice during image acquisition. However, substantial local variation across a slice can occur. This work describes an extension of the conventional navigator technique that improves the estimation of the magnetic field distribution in the brain during strong field fluctuations. This is done using the combination of signals from multiple coil elements, the coil sensitivity profiles, and frequency encoding: termed sensitivity-encoded navigator echoes. In vivo validation was performed in subjects who performed normal breathing, nose touching, and deep breathing during scanning. The sensitivity-encoded navigator technique leads to an error reduction in estimating the field distribution in the brain of 73% ± 16% compared with 56% ± 14% for conventional estimation. Image quality can be improved via incorporating this navigator information appropriately into the image reconstruction. When the sensitivity-encoded navigator technique was applied to a T(2)(*)-weighted sequence at 7 T, a ghosting reduction of 47% ± 13% was measured during nose touching experiments compared with no correction.

Toward individualized SAR models and in vivo validation.

The specific absorption rate (SAR) is a limiting constraint in sequence design for high-field MRI. SAR estimation is typically performed by numerical simulations using generic human body models. This entails an intrinsic uncertainty in present SAR prediction. This study first investigates the required detail of human body models in terms of spatial resolution and the number of soft tissue classes required, based on finite-differences time-domain simulations of a 3 T body coil. The numerical results indicate that a resolution of 5 mm is sufficient for local SAR estimation. Moreover, a differentiation between fatty tissues, water-rich tissues, and the lungs was found to be essential to represent eddy current paths inside the human body. This study then proposes a novel approach for generating individualized body models from whole-body water-fat-separated MR data and applies it to volunteers. The SAR hotspots consistently occurred in the arms due to proximity to the body coil as well as in narrow regions of the muscles. An initial in vivo validation of the simulated fields in comparison with measured B(1)-field maps showed good qualitative and quantitative agreement.

Automatic, three-segment, MR-based attenuation correction for whole-body PET/MR data.

PURPOSE: The combination of positron emission tomography (PET) and magnetic resonance (MR) tomography in a single device is anticipated to be the next step following PET/CT for future molecular imaging application. Compared to CT, the main advantages of MR are versatile soft tissue contrast and its capability to acquire functional information without ionizing radiation. However, MR is not capable of measuring a physical quantity that would allow a direct derivation of the attenuation values for high-energy photons. METHODS: To overcome this problem, we propose a fully automated approach that uses a dedicated T1-weighted MR sequence in combination with a customized image processing technique to derive attenuation maps for whole-body PET. The algorithm automatically identifies the outer contour of the body and the lungs using region-growing techniques in combination with an intensity analysis for automatic threshold estimation. No user interaction is required to generate the attenuation map. RESULTS: The accuracy of the proposed MR-based attenuation correction (AC) approach was evaluated in a clinical study using whole-body PET/CT and MR images of the same patients (n = 15). The segmentation of the body and lung contour (L-R directions) was evaluated via a four-point scale in comparison to the original MR image (mean values >3.8). PET images were reconstructed using elastically registered MR-based and CT-based (segmented and non-segmented) attenuation maps. The MR-based AC showed similar behaviour as CT-based AC and similar accuracy as offered by segmented CT-based AC. Standardized uptake value (SUV) comparisons with reference to CT-based AC using predefined attenuation coefficients showed the largest difference for bone lesions (mean value ± standard variation of SUV(max): -3.0% ± 3.9% for MR; -6.5% ± 4.1% for segmented CT). A blind comparison of PET images corrected with segmented MR-based, CT-based and segmented CT-based AC afforded identical lesion detectability, but slight differences in image quality were found. CONCLUSION: Our MR-based attenuation correction method offers similar correction accuracy as offered by segmented CT. According to the specialists involved in the blind study, these differences do not affect the diagnostic value of the PET images.

Free-breathing whole-heart coronary MRA with 3D radial SSFP and self-navigated image reconstruction.

Respiratory motion is a major source of artifacts in cardiac magnetic resonance imaging (MRI). Free-breathing techniques with pencil-beam navigators efficiently suppress respiratory motion and minimize the need for patient cooperation. However, the correlation between the measured navigator position and the actual position of the heart may be adversely affected by hysteretic effects, navigator position, and temporal delays between the navigators and the image acquisition. In addition, irregular breathing patterns during navigator-gated scanning may result in low scan efficiency and prolonged scan time. The purpose of this study was to develop and implement a self-navigated, free-breathing, whole-heart 3D coronary MRI technique that would overcome these shortcomings and improve the ease-of-use of coronary MRI. A signal synchronous with respiration was extracted directly from the echoes acquired for imaging, and the motion information was used for retrospective, rigid-body, through-plane motion correction. The images obtained from the self-navigated reconstruction were compared with the results from conventional, prospective, pencil-beam navigator tracking. Image quality was improved in phantom studies using self-navigation, while equivalent results were obtained with both techniques in preliminary in vivo studies.

Basic considerations on the impact of the coil array on the performance of Transmit SENSE.

"Transmit SENSE" adapts the idea of parallel imaging to RF transmission. Using multiple independent transmit coils, the duration of a spatially selective RF pulse can be reduced. It is known from parallel imaging that a suboptimal coil-array geometry might lead to an ill-conditioned sensitivity matrix and, thus, to a non-homogenous noise amplification in the resulting image. The current paper investigates the consequences of suboptimal coil arrays for Transmit SENSE. Two possible consequences of a suboptimal coil array are studied in the framework of numerical simulations: the incorrect excitation of the desired spatial pattern and the increase of the specific energy absorption rate (SAR), i.e. the RF power required to excite the desired pattern. Incorrect pattern excitation occurs only in pathologic coil-array scenarios. The increase of the SAR is very moderate for a large range of coil-array geometries. Using spiral excitation k-space trajectories leads to superior results compared to Cartesian trajectories. The problem of an ill-conditioned matrix inversion does not seem to play a major role in Transmit SENSE. Consequently, the freedom in designing coil arrays seems to be much larger in Transmit SENSE than in SENSE in the receive mode.

Free breathing 3D balanced FFE coronary magnetic resonance angiography with prolonged cardiac acquisition windows and intra-RR motion correction.

A shortcoming of today's coronary magnetic resonance angiography (MRA) is its low total scan efficiency (<5%), as only small well-defined fractions of the respiratory (50%) and cardiac (10%) cycle are used for data acquisition. These precautions are necessary to prevent blurring and artifacts related to respiratory and cardiac motion. Hence, scan times range from 4 to 9 min, which may not be tolerated by patients. To overcome this drawback, an ECG-triggered, navigator-gated free breathing radial 3D balanced FFE sequence with intra-RR motion correction is investigated in this study. Scan efficiency is increased by using a long cardiac acquisition window during the RR interval. This allows the acquisition of a number of independent k-space segments during each cardiac cycle. The intersegment motion is corrected using a self-guided epicardial fat tracking procedure in a postprocessing step. Finally, combining the motion-corrected segments forms a high-resolution image. Experiments on healthy volunteers are presented to show the basic feasibility of this approach.

Efficient foldover suppression using SENSE.

Parallel imaging techniques, which in principle represent procedures of unfolding a reduced dataset, are well known and well established in MR imaging. This paper presents a further application of one particular reconstruction method, the SENSE algorithm, considered from a different point of view to remove potential foldover in conventional images acquired with multiple receive coils. Based on the coil sensitivity information, a body coverage map in the excited plane is calculated. This is used together with the measured raw data in a SENSE-type reconstruction to optimize the signal-to-noise ratio (SNR) as well as to remove foldover reliably by unfolding the image to a larger field of view. The reconstruction is performed automatically, without any user interaction, and does not affect data acquisition. Based on phantom and in vivo studies, which retain high image quality after the removal, the potential and limits of this approach are discussed, also taking into account future scanner hardware that will support a large number of parallel receiver channels.

Fast isotropic volumetric coronary MR angiography using free-breathing 3D radial balanced FFE acquisition.

A shortcoming of current coronary MRA methods with thin-slab 3D acquisitions is the time-consuming examination necessitated by extensive scout scanning and precise slice planning. To improve ease of use and cover larger parts of the anatomy, it appears desirable to image the entire heart with high spatial resolution instead. For this purpose, an isotropic 3D-radial acquisition was employed in this study. This method allows undersampling of k-space in all three spatial dimensions, and its insensitivity to motion enables extended acquisitions per cardiac cycle. We present initial phantom and in vivo results obtained in volunteers that demonstrate large volume coverage with high isotropic spatial resolution. We were able to visualize all major parts of the coronary arteries retrospectively from the volume data set without compromising the image quality. The scan time ranged from 10 to 14 min during free breathing at a heart rate of 60 bpm, which is comparable to that of a thin-slab protocol comprising multiple scans for each coronary artery.

Accelerated coronary MRA by simultaneous acquisition of multiple 3D stacks.

The implementation and first in vivo results of a novel coronary magnetic resonance angiography (MRA) protocol allowing simultaneous acquisition of multiple geometrically independent 3D imaging stacks are presented. Each imaging stack is acquired in a separate cardiac phase using an individual magnetization preparation and navigator-based gating and prospective motion correction. Each stack covers one of the main coronary vessels. Thus, an improvement of scan efficiency was achieved, which was used in this study to reduce total scan time at standard image quality. Experiments performed in healthy volunteers and in patients using a two-stack approach yielded a total scan time reduction of 50% with an image quality equivalent to standard single-stack coronary MRA.

Advances in sensitivity encoding with arbitrary k-space trajectories.

New, efficient reconstruction procedures are proposed for sensitivity encoding (SENSE) with arbitrary k-space trajectories. The presented methods combine gridding principles with so-called conjugate-gradient iteration. In this fashion, the bulk of the work of reconstruction can be performed by fast Fourier transform (FFT), reducing the complexity of data processing to the same order of magnitude as in conventional gridding reconstruction. Using the proposed method, SENSE becomes practical with nonstandard k-space trajectories, enabling considerable scan time reduction with respect to mere gradient encoding. This is illustrated by imaging simulations with spiral, radial, and random k-space patterns. Simulations were also used for investigating the convergence behavior of the proposed algorithm and its dependence on the factor by which gradient encoding is reduced. The in vivo feasibility of non-Cartesian SENSE imaging with iterative reconstruction is demonstrated by examples of brain and cardiac imaging using spiral trajectories. In brain imaging with six receiver coils, the number of spiral interleaves was reduced by factors ranging from 2 to 6. In cardiac real-time imaging with four coils, spiral SENSE permitted reducing the scan time per image from 112 ms to 56 ms, thus doubling the frame-rate.

Direct comparison of 3D spiral vs. Cartesian gradient-echo coronary magnetic resonance angiography.

While 3D thin-slab coronary magnetic resonance angiography (MRA) has traditionally been performed using a Cartesian acquisition scheme, spiral k-space data acquisition offers several potential advantages. However, these strategies have not been directly compared in the same subjects using similar methodologies. Thus, in the present study a comparison was made between 3D coronary MRA using Cartesian segmented k-space gradient-echo and spiral k-space data acquisition schemes. In both approaches the same spatial resolution was used and data were acquired during free breathing using navigator gating and prospective slice tracking. Magnetization preparation (T(2) preparation and fat suppression) was applied to increase the contrast. For spiral imaging two different examinations were performed, using one or two spiral interleaves, during each R-R interval. Spiral acquisitions were found to be superior to the Cartesian scheme with respect to the signal-to-noise ratio (SNR) and contrast-to-noise-ratio (CNR) (both P < 0.001) and image quality. The single spiral per R-R interval acquisition had the same total scan duration as the Cartesian acquisition, but the single spiral had the best image quality and a 2.6-fold increase in SNR. The double-interleaf spiral approach showed a 50% reduction in scanning time, a 1.8-fold increase in SNR, and similar image quality when compared to the standard Cartesian approach. Spiral 3D coronary MRA appears to be preferable to the Cartesian scheme. The increase in SNR may be "traded" for either shorter scanning times using multiple consecutive spiral interleaves, or for enhanced spatial resolution.

Interactive reduced FOV imaging for projection reconstruction and spiral acquisition.

MR fluoroscopy is likely to gain increasing importance for the visualization of dynamic processes such as cardiac function and for the guidance of interventional procedures. In many applications the dynamic processes are restricted to a part of the object under study making reduced field of view (rFOV) imaging desirable. The restriction to a smaller FOV can either be used to increase the spatial or the temporal resolution. In projection reconstruction (PR) and spiral imaging severe backfolding artifacts occur if a rFOV is used. In this paper efficient suppression schemes are proposed for PR- and spiral imaging to avoid backfolding artifacts. Evaluation of the proposed schemes was done on an interactive real-time MR-scanner. Cardiac function studies clearly showed the potential of this technique for PR- and spiral imaging.

3D coronary vessel wall imaging utilizing a local inversion technique with spiral image acquisition.

Current 2D black blood coronary vessel wall imaging suffers from a relatively limited coverage of the coronary artery tree. Hence, a 3D approach facilitating more extensive coverage would be desirable. The straightforward combination of a 3D-acquisition technique together with a dual inversion prepulse can decrease the effectiveness of the black blood preparation. To minimize artifacts from insufficiently suppressed blood signal of the nearby blood pools, and to reduce residual respiratory motion artifacts from the chest wall, a novel local inversion technique was implemented. The combination of a nonselective inversion prepulse with a 2D selective local inversion prepulse allowed for suppression of unwanted signal outside a user-defined region of interest. Among 10 subjects evaluated using a 3D-spiral readout, the local inversion pulse effectively suppressed signal from ventricular blood, myocardium, and chest wall tissue in all cases. The coronary vessel wall could be visualized within the entire imaging volume.

Free-breathing cardiac MR imaging: study of implications of respiratory motion--initial results.

The respiratory motion of several anatomic regions (right hemidiaphragm, left ventricle of the heart, chest wall, abdominal wall) was investigated during free breathing in 10 healthy volunteers by using multinavigator technology and real-time magnetic resonance (MR) imaging. The respiratory motion shows hysteretic effects, which are strongly subject dependent and might have some effect on the quality of cardiac MR images.

Coronary magnetic resonance angiography.

Despite advances in both prevention and treatment, cardiovascular disease remains the leading cause of morbidity and mortality in the United States. The current gold standard for the diagnosis of coronary artery disease is the x-ray coronary angiogram, which is both costly and associated with a small risk of morbidity. More than 1 million Americans are referred for this test annually, and despite the availability of numerous noninvasive tests to identify patients with coronary artery disease, > or =35% of patients referred for this test are found not to have disease. It therefore would be beneficial to use a noninvasive test to allow the presence of coronary atherosclerosis to be determined directly. Coronary magnetic resonance angiography, a technique that is aimed at establishing a noninvasive test for the assessment of significant coronary stenoses, obviates the risks of patient exposure to radiation of x-ray angiography and therefore represents a major step forward in diagnostic cardiology.

Improved 3D spiral imaging for coronary MR angiography.

Thin-slab 3D spiral imaging has been used for MR angiography to image selected coronary arteries. Improved scan efficiency was achieved using a train of multiple spiral interleaves within each single R-R interval acquired in the late diastole. Data acquisition was performed during free breathing, using navigator gating. Additionally, prospective slice tracking was applied to further reduce the sensitivity to motion. The application of a T(2)-preparation pulse and fat suppression increased the contrast between blood and myocardium. Experiments performed on healthy volunteers are presented to show the feasibility of this approach, which allows coronary artery imaging of selected vessels within a few minutes. Magn Reson Med 45:172-175, 2001.

Reversed spiral MR imaging.

Reversed spiral imaging is discussed as an approach that provides strong intrinsic T *(2) contrast without the need for long repetition times. In comparison to the conventional forward spiral method, the T *(2) contrast achieved by reversing the spiral k-space trajectory is similar and differs only for very fast relaxing species. The flow and motion sensitivity of the reversed approach is the same if flow compensation is applied, except for a flow-dependent voxel shift and the sign of the artifact pattern. By simulations as well as phantom and in vivo experiments, it is shown that the image quality in reversed spiral imaging is comparable to that obtained with the forward spiral method.

Improvements in spiral MR imaging.

The basic principles of spiral MR image acquisition and reconstruction are summarised with the aim to explain how high quality spiral images can be obtained. The sensitivity of spiral imaging to off-resonance effects, gradient system imperfections and concomitant fields are outlined and appropriate measures for corrections are discussed in detail. Phantom experiments demonstrate the validity of the correction approaches. Furthermore, in-vivo results are shown to demonstrate the applicability of the corrections under in-vivo conditions. The spiral image quality thus obtained was found to be comparable to that obtainable with robust spin warp sequences.

On the performance and accuracy of 2D navigator pulses.

The purpose of this study was to investigate and to optimize the performance of two-dimensional spatially selective excitation pulses used for navigator applications on a clinical scanner. The influence of gradient imperfections, off-resonance effects, and incomplete k-space covering on the pencil beam-shaped spatial excitation profile of the 2D RF pulse was studied. The studies involved experiments performed on phantoms and in vivo. In addition, simulations were carried out by numerical integration of the Bloch equations. The accuracy of positioning of the pencil beam was increased by a factor of three by employing a simple correction scheme for the compensation of gradient distortions. The spatial selectivity of the 2D RF pulse was improved by taking sampling density corrections into account. The 2D RF pulse performance was found to be sufficient to monitor the diaphragm motion even at moderate gradient strength. For applications, where a high spatial resolution is required or a less characteristic contrast is present a strong gradient system is recommended.