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1.
Structure ; 32(9): 1465-1476.e3, 2024 Sep 05.
Artigo em Inglês | MEDLINE | ID: mdl-38971159

RESUMO

OleP is a bacterial cytochrome P450 involved in oleandomycin biosynthesis as it catalyzes regioselective epoxidation on macrolide intermediates. OleP has recently been reported to convert lithocholic acid (LCA) into murideoxycholic acid through a highly regioselective reaction and to unspecifically hydroxylate testosterone (TES). Since LCA and TES mainly differ by the substituent group at the C17, here we used X-ray crystallography, equilibrium binding assays, and molecular dynamics simulations to investigate the molecular basis of the diverse reactivity observed with the two steroids. We found that the differences in the structure of TES and LCA affect the capability of these molecules to directly form hydrogen bonds with N-terminal residues of OleP internal helix I. The establishment of these contacts, by promoting the bending of helix I, fosters an efficient trigger of the open-to-closed structural transition that occurs upon substrate binding to OleP and contributes to the selectivity of the subsequent monooxygenation reaction.


Assuntos
Proteínas de Bactérias , Sistema Enzimático do Citocromo P-450 , Ligação de Hidrogênio , Simulação de Dinâmica Molecular , Ligação Proteica , Testosterona , Sistema Enzimático do Citocromo P-450/metabolismo , Sistema Enzimático do Citocromo P-450/química , Cristalografia por Raios X , Especificidade por Substrato , Testosterona/metabolismo , Testosterona/química , Proteínas de Bactérias/metabolismo , Proteínas de Bactérias/química , Ácido Litocólico/química , Ácido Litocólico/metabolismo , Sítios de Ligação , Hidroxilação
2.
Molecules ; 28(2)2023 Jan 13.
Artigo em Inglês | MEDLINE | ID: mdl-36677890

RESUMO

Cytochrome P450 OleP catalytic activity is strongly influenced by its structural dynamic conformational behavior. Here, we combine equilibrium-binding experiments with all-atom molecular dynamics simulations to clarify how different environments affect OleP conformational equilibrium between the open and the closed-catalytic competent-forms. Our data clearly show that at high-ionic strength conditions, the closed form is favored, and, very interestingly, different mechanisms, depending on the chemistry of the cations, can be used to rationalize such an effect.


Assuntos
Sistema Enzimático do Citocromo P-450 , Sais , Sistema Enzimático do Citocromo P-450/metabolismo , Conformação Proteica , Simulação de Dinâmica Molecular
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