Soundscapes and deep learning enable tracking biodiversity recovery in tropical forests.

Tropical forest recovery is fundamental to addressing the intertwined climate and biodiversity loss crises. While regenerating trees sequester carbon relatively quickly, the pace of biodiversity recovery remains contentious. Here, we use bioacoustics and metabarcoding to measure forest recovery post-agriculture in a global biodiversity hotspot in Ecuador. We show that the community composition, and not species richness, of vocalizing vertebrates identified by experts reflects the restoration gradient. Two automated measures - an acoustic index model and a bird community composition derived from an independently developed Convolutional Neural Network - correlated well with restoration (adj-R² = 0.62 and 0.69, respectively). Importantly, both measures reflected composition of non-vocalizing nocturnal insects identified via metabarcoding. We show that such automated monitoring tools, based on new technologies, can effectively monitor the success of forest recovery, using robust and reproducible data.

Broadening the focus of forest conservation beyond carbon.

Two concurrent trends are contributing towards a much broader view of forest conservation. First, the appreciation of the role of forests as a nature-based climate solution has grown rapidly, particularly among governments and the private sector. Second, the spatiotemporal resolution of forest mapping and the ease of tracking forest changes have dramatically improved. As a result, who does and who pays for forest conservation is changing: sectors and people previously considered separate from forest conservation now play an important role and need to be held accountable and motivated or forced to conserve forests. This change requires, and has stimulated, a broader range of forest conservation solutions. The need to assess the outcomes of conservation interventions has motivated the development and application of sophisticated econometric analyses, enabled by high resolution satellite data. At the same time, the focus on climate, together with the nature of available data and evaluation methods, has worked against a more comprehensive view of forest conservation. Instead, it has encouraged a focus on trees as carbon stores, often leaving out other important goals of forest conservation, such as biodiversity and human wellbeing. Even though both are intrinsically connected to climate outcomes, these areas have not kept pace with the scale and diversification of forest conservation. Finding synergies between these 'co-benefits', which play out on a local scale, with the carbon objective, related to the global amount of forests, is a major challenge and area for future advances in forest conservation.

Increased RV:LV ratio on chest CT-angiogram in COVID-19 is a marker of adverse outcomes.

BACKGROUND: Right ventricular (RV) dilation has been used to predict adverse outcomes in acute pulmonary conditions. It has been used to categorize the severity of novel coronavirus infection (COVID-19) infection. Our study aimed to use chest CT-angiogram (CTA) to assess if increased RV dilation, quantified as an increased RV:LV (left ventricle) ratio, is associated with adverse outcomes in the COVID-19 infection, and if it occurs out of proportion to lung parenchymal disease. RESULTS: We reviewed clinical, laboratory, and chest CTA findings in COVID-19 patients (n = 100), and two control groups: normal subjects (n = 10) and subjects with organizing pneumonia (n = 10). On a chest CTA, we measured basal dimensions of the RV and LV in a focused 4-chamber view, and dimensions of pulmonary artery (PA) and aorta (AO) at the PA bifurcation level. Among the COVID-19 cohort, a higher RV:LV ratio was correlated with adverse outcomes, defined as ICU admission, intubation, or death. In patients with adverse outcomes, the RV:LV ratio was 1.06 ± 0.10, versus 0.95 ± 0.15 in patients without adverse outcomes. Among the adverse outcomes group, compared to the control subjects with organizing pneumonia, the lung parenchymal damage was lower (22.6 ± 9.0 vs. 32.7 ± 6.6), yet the RV:LV ratio was higher (1.06 ± 0.14 vs. 0.89 ± 0.07). In ROC analysis, RV:LV ratio had an AUC = 0.707 with an optimal cutoff of RV:LV ≥ 1.1 as a predictor of adverse outcomes. In a validation cohort (n = 25), an RV:LV ≥ 1.1 as a cutoff predicted adverse outcomes with an odds ratio of 76:1. CONCLUSIONS: In COVID-19 patients, RV:LV ratio ≥ 1.1 on CTA chest is correlated with adverse outcomes. RV dilation in COVID-19 is out of proportion to parenchymal lung damage, pointing toward a vascular and/or thrombotic injury in the lungs.

Early warning sign of forest loss in protected areas.

As humanity is facing the double challenge of species extinctions and climate change, designating parts of forests as protected areas is a key conservation strategy.1-4 Protected areas, encompassing 14.9% of the Earth's land surface and 19% of global forests, can prevent forest loss but do not do so perfectly everywhere.5-12 The reasons why protection only works in some areas are difficult to generalize: older and newer parks, protected areas with higher and lower suitability for agriculture, and more and less strict protection can be more effective at preventing forest loss than their counterparts.6,8,9,12-16 Yet predicting future forest loss within protected areas is crucial to proactive conservation. Here, we identify an early warning sign of subsequent forest loss, based on forest loss patterns in strict protected areas and their surrounding landscape worldwide, from 2000 to 2018.17,18 We found that a low level in the absolute forest cover immediately outside of a protected area signals a high risk of future forest loss inside the protected area itself. When the amount of forest left outside drops to <20%, the protected area is likely to experience rates of forest loss matching those in the wider landscape, regardless of its protection status (e.g., 5% loss outside will be matched by 5% loss inside). This knowledge could be used to direct funding to protected areas threatened by imminent forest loss, helping to proactively bolster protection to prevent forest loss, especially in countries where detailed information is lacking.

Conservation of Tropical Forests in the Anthropocene.

If current trends continue, the tropical forests of the Anthropocene will be much smaller, simpler, steeper and emptier than they are today. They will be more diminished in size and heavily fragmented (especially in lowland wet forests), have reduced structural and species complexity, be increasingly restricted to steeper, less accessible areas, and be missing many heavily hunted species. These changes, in turn, will greatly reduce the quality and quantity of ecosystem services that tropical forests can provide. Driving these changes will be continued clearance for farming and monoculture forest plantations, unsustainable selective logging, overhunting, and, increasingly, climate change. Concerted action by local and indigenous communities, environmental groups, governments, and corporations can reverse these trends and, if successful, provide future generations with a tropical forest estate that includes a network of primary forest reserves robustly defended from threats, recovering logged and secondary forests, and resilient community forests managed for the needs of local people. Realizing this better future for tropical forests and people will require formalisation of land tenure for local and indigenous communities, better-enforced environmental laws, the widescale roll-out of payments for ecosystem service schemes, and sustainable intensification of under-yielding farmland, as well as global-scale societal changes, including reduced consumerism, meat consumption, fossil fuel reliance, and population growth. But the time to act is now, while the opportunity remains to protect a semblance of intact, hyperdiverse tropical forests.

Using soundscapes to detect variable degrees of human influence on tropical forests in Papua New Guinea.

There is global concern about tropical forest degradation, in part, because of the associated loss of biodiversity. Communities and indigenous people play a fundamental role in tropical forest management and are often efficient at preventing forest degradation. However, monitoring changes in biodiversity due to degradation, especially at a scale appropriate to local tropical forest management, is plagued by difficulties, including the need for expert training, inconsistencies across observers, and lack of baseline or reference data. We used a new biodiversity remote-sensing technology, the recording of soundscapes, to test whether the acoustic saturation of a tropical forest in Papua New Guinea decreases as land-use intensity by the communities that manage the forest increases. We sampled soundscapes continuously for 24 hours at 34 sites in different land-use zones of 3 communities. Land-use zones where forest cover was fully retained had significantly higher soundscape saturation during peak acoustic activity times (i.e., dawn and dusk chorus) compared with land-use types with fragmented forest cover. We conclude that, in Papua New Guinea, the relatively simple measure of soundscape saturation may provide a cheap, objective, reproducible, and effective tool for monitoring tropical forest deviation from an intact state, particularly if it is used to detect the presence of intact dawn and dusk choruses.

Impact of Forest Management on Species Richness: Global Meta-Analysis and Economic Trade-Offs.

Forests managed for timber have an important role to play in conserving global biodiversity. We evaluated the most common timber production systems worldwide in terms of their impact on local species richness by conducting a categorical meta-analysis. We reviewed 287 published studies containing 1008 comparisons of species richness in managed and unmanaged forests and derived management, taxon, and continent specific effect sizes. We show that in terms of local species richness loss, forest management types can be ranked, from best to worse, as follows: selection and retention systems, reduced impact logging, conventional selective logging, clear-cutting, agroforestry, timber plantations, fuelwood plantations. Next, we calculated the economic profitability in terms of the net present value of timber harvesting from 10 hypothetical wood-producing Forest Management Units (FMU) from around the globe. The ranking of management types is altered when the species loss per unit profit generated from the FMU is considered. This is due to differences in yield, timber species prices, rotation cycle length and production costs. We thus conclude that it would be erroneous to dismiss or prioritize timber production regimes, based solely on their ranking of alpha diversity impacts.

Conceptualizing Forest Degradation.

Forest degradation is a global environmental issue, but its definition is problematic. Difficulties include choosing appropriate reference states, timescales, thresholds, and forest values. We dispense with many such ambiguities by interpreting forest degradation through the frame of ecological resilience, and with reference to forest dynamics. Specifically, we define forest degradation as a state of anthropogenically induced arrested succession, where ecological processes that underlie forest dynamics are diminished or severely constrained. Metrics of degradation might include those that reflect ecological processes shaping community dynamics, notably the regeneration of plant species. Arrested succession implies that management intervention is necessary to recover successional trajectories. Such a definition can be applied to any forest ecosystem, and can also be extended to other ecosystems.

Avian responses to selective logging shaped by species traits and logging practices.

Selective logging is one of the most common forms of forest use in the tropics. Although the effects of selective logging on biodiversity have been widely studied, there is little agreement on the relationship between life-history traits and tolerance to logging. In this study, we assessed how species traits and logging practices combine to determine species responses to selective logging, based on over 4000 observations of the responses of nearly 1000 bird species to selective logging across the tropics. Our analysis shows that species traits, such as feeding group and body mass, and logging practices, such as time since logging and logging intensity, interact to influence a species' response to logging. Frugivores and insectivores were most adversely affected by logging and declined further with increasing logging intensity. Nectarivores and granivores responded positively to selective logging for the first two decades, after which their abundances decrease below pre-logging levels. Larger species of omnivores and granivores responded more positively to selective logging than smaller species from either feeding group, whereas this effect of body size was reversed for carnivores, herbivores, frugivores and insectivores. Most importantly, species most negatively impacted by selective logging had not recovered approximately 40 years after logging cessation. We conclude that selective timber harvest has the potential to cause large and long-lasting changes in avian biodiversity. However, our results suggest that the impacts can be mitigated to a certain extent through specific forest management strategies such as lengthening the rotation cycle and implementing reduced impact logging.

Thresholds of logging intensity to maintain tropical forest biodiversity.

Primary tropical forests are lost at an alarming rate, and much of the remaining forest is being degraded by selective logging. Yet, the impacts of logging on biodiversity remain poorly understood, in part due to the seemingly conflicting findings of case studies: about as many studies have reported increases in biodiversity after selective logging as have reported decreases. Consequently, meta-analytical studies that treat selective logging as a uniform land use tend to conclude that logging has negligible effects on biodiversity. However, selectively logged forests might not all be the same. Through a pantropical meta-analysis and using an information-theoretic approach, we compared and tested alternative hypotheses for key predictors of the richness of tropical forest fauna in logged forest. We found that the species richness of invertebrates, amphibians, and mammals decreases as logging intensity increases and that this effect varies with taxonomic group and continental location. In particular, mammals and amphibians would suffer a halving of species richness at logging intensities of 38 m(3) ha(-1) and 63 m(3) ha(-1), respectively. Birds exhibit an opposing trend as their total species richness increases with logging intensity. An analysis of forest bird species, however, suggests that this pattern is largely due to an influx of habitat generalists into heavily logged areas while forest specialist species decline. Our study provides a quantitative analysis of the nuanced responses of species along a gradient of logging intensity, which could help inform evidence-based sustainable logging practices from the perspective of biodiversity conservation.