Soil-dwelling grub larvae of Protaetia brevitarsis biodegrade polystyrene: Responses of gut microbiome and host metabolism.

Plastic pollution poses a significant threat to terrestrial ecosystems, yet the potential for soil fauna to contribute to plastic biodegradation remains largely unexplored. In this study, we reveal that soil-dwelling grubs, Protaetia brevitarsis larvae, can effectively biodegrade polystyrene (PS) plastics. Over a period of 4 weeks, these grubs achieved a remarkable 61.5 % reduction in PS foam mass. This biodegradation was confirmed by the depolymerization of ingested PS, formation of oxidative functional groups, noticeable chemical modifications, and an increase of δ13C of residual PS in frass. Additionally, antibiotic treatment to suppress gut microbes led to variations in the biodegradation process. PS ingestion induced a significant shift in the gut microbiome, promoting the growth of degradation-related bacteria such as Promicromonosporaceae, Bacillaceae, and Paenibacillaceae. Furthermore, the digestion of plastic triggered extensive metabolomic reprogramming of grubs' intestines, enhancing redox capabilities and facilitating PS biodegradation. These results indicate that responsive adaptation of both the gut microbiome and the host's intestinal metabolism contributes to PS degradation. Collectively, these findings demonstrate P. brevitarsis larvae's capability to alleviate soil plastic pollution, and highlight the potential of researching soil fauna further for sustainable plastic waste management solutions.

Pseudomonas stutzeri KC carries the pdt genes for carbon tetrachloride degradation on an integrative and conjugative element.

Pseudomonas stutzeri KC can rapidly degrade carbon tetrachloride (CCl4) to CO2 by a fortuitous reaction with pyridine-2,6-bis(thiocarboxylic acid), a metal chelator encoded by pdt genes. These genes were first identified after a spontaneous mutant, strain CTN1, lost the ability to degrade CCl4. Here we report the complete genome of strain KC and show that these pdt genes are located on an integrative and conjugative element (ICE), designated ICEPsstKC. Comparative genome analyses revealed homologues of pdt genes in genomes of members of other gammaproteobacterial orders. Discrepancies between the tree topologies of the deduced pdt gene products and the host phylogeny based on 16S rRNA provided evidence for horizontal gene transfer (HGT) in several sequenced strains of these orders. In addition to ICEPsstKC, HGT may be have been facilitated by other mobile genetic elements, as indicated by the location of the pdt gene cluster adjacent to fragments of other ICEs and prophages in several genome assemblies. We could here show that the majority of cells from the culture collection DSMZ had lost the ICE. The presence of the pdt gene cluster on mobile genetic elements has important implications for the bioremediation of CCl4 for bioremediation of CCl4 and needs consideration when selecting suitable strains.

Anaerobic Wastewater Treatment and Potable Reuse: Energy and Life Cycle Considerations.

Anaerobic secondary treatment has the potential to facilitate energy-positive operations at wastewater treatment plants, but post-treatment of the anaerobic effluent is needed to recover dissolved methane and nutrients and remove sulfide. In this study, a life cycle assessment was conducted to compare hypothetical full-scale wastewater treatment trains and direct potable reuse trains that combine the staged anaerobic fluidized membrane bioreactor (SAF-MBR) with appropriate post-treatment. We found that anaerobic wastewater treatment trains typically consumed less energy than conventional aerobic treatment, but overall global warming potentials were not significantly different. Generally, recovery of dissolved methane for energy production resulted in lower life cycle impacts than microbial transformation of methane, and microbial oxidation of sulfide resulted in lower environmental impacts than chemical precipitation. Use of reverse osmosis to produce potable water was also found to be a sustainable method for nutrient removal because direct potable reuse trains with the SAF-MBR consumed less energy and had lower life cycle impacts than activated sludge. Moving forward, dissolved methane recovery, reduced chemical usage, and investments that enable direct potable reuse have been flagged as key research areas for further investigation of anaerobic secondary treatment options.

Engineering osmolysis susceptibility in Cupriavidus necator and Escherichia coli for recovery of intracellular products.

BACKGROUND: Intracellular biomacromolecules, such as industrial enzymes and biopolymers, represent an important class of bio-derived products obtained from bacterial hosts. A common key step in the downstream separation of these biomolecules is lysis of the bacterial cell wall to effect release of cytoplasmic contents. Cell lysis is typically achieved either through mechanical disruption or reagent-based methods, which introduce issues of energy demand, material needs, high costs, and scaling problems. Osmolysis, a cell lysis method that relies on hypoosmotic downshock upon resuspension of cells in distilled water, has been applied for bioseparation of intracellular products from extreme halophiles and mammalian cells. However, most industrial bacterial strains are non-halotolerant and relatively resistant to hypoosmotic cell lysis. RESULTS: To overcome this limitation, we developed two strategies to increase the susceptibility of non-halotolerant hosts to osmolysis using Cupriavidus necator, a strain often used in electromicrobial production, as a prototypical strain. In one strategy, C. necator was evolved to increase its halotolerance from 1.5% to 3.25% (w/v) NaCl through adaptive laboratory evolution, and genes potentially responsible for this phenotypic change were identified by whole genome sequencing. The evolved halotolerant strain experienced an osmolytic efficiency of 47% in distilled water following growth in 3% (w/v) NaCl. In a second strategy, the cells were made susceptible to osmolysis by knocking out the large-conductance mechanosensitive channel (mscL) gene in C. necator. When these strategies were combined by knocking out the mscL gene from the evolved halotolerant strain, greater than 90% osmolytic efficiency was observed upon osmotic downshock. A modified version of this strategy was applied to E. coli BL21 by deleting the mscL and mscS (small-conductance mechanosensitive channel) genes. When grown in medium with 4% NaCl and subsequently resuspended in distilled water, this engineered strain experienced 75% cell lysis, although decreases in cell growth rate due to higher salt concentrations were observed. CONCLUSIONS: Our strategy is shown to be a simple and effective way to lyse cells for the purification of intracellular biomacromolecules and may be applicable in many bacteria used for bioproduction.

Microbial biomanufacturing for space-exploration-what to take and when to make.

As renewed interest in human space-exploration intensifies, a coherent and modernized strategy for mission design and planning has become increasingly crucial. Biotechnology has emerged as a promising approach to increase resilience, flexibility, and efficiency of missions, by virtue of its ability to effectively utilize in situ resources and reclaim resources from waste streams. Here we outline four primary mission-classes on Moon and Mars that drive a staged and accretive biomanufacturing strategy. Each class requires a unique approach to integrate biomanufacturing into the existing mission-architecture and so faces unique challenges in technology development. These challenges stem directly from the resources available in a given mission-class-the degree to which feedstocks are derived from cargo and in situ resources-and the degree to which loop-closure is necessary. As mission duration and distance from Earth increase, the benefits of specialized, sustainable biomanufacturing processes also increase. Consequentially, we define specific design-scenarios and quantify the usefulness of in-space biomanufacturing, to guide techno-economics of space-missions. Especially materials emerged as a potentially pivotal target for biomanufacturing with large impact on up-mass cost. Subsequently, we outline the processes needed for development, testing, and deployment of requisite technologies. As space-related technology development often does, these advancements are likely to have profound implications for the creation of a resilient circular bioeconomy on Earth.

Recovery of Clean Water and Ammonia from Domestic Wastewater: Impacts on Embodied Energy and Greenhouse Gas Emissions.

Treatment of domestic wastewater can recover valuable resources, including clean water, energy, and ammonia. Important metrics for these systems are greenhouse gas (GHG) emissions and embodied energy, both of which are location- and technology-dependent. Here, we determine the embodied energy and GHG emissions resulting from a conventional process train, and we compare them to a nonconventional process train. The conventional train assumes freshwater conveyance from a pristine source that requires energy for pumping (US average of 0.29 kWh/m3), aerobic secondary treatment with N removal as N2, and Haber-Bosch synthesis of ammonia. Overall, we find that this process train has an embodied energy of 1.02 kWh/m3 and a GHG emission of 0.77 kg-CO2eq/m3. We compare these metrics to those of a nonconventional process train that features anaerobic secondary treatment technology followed by further purification of the effluent by reverse osmosis and air stripping for ammonia recovery. This "short-cut" process train reduces embodied energy to 0.88 kWh/m3 and GHG emissions to 0.42 kg-CO2eq/m3, while offsetting demand for ammonia from the Haber-Bosch process and decreasing reliance upon water transported over long distances. Finally, to assess the potential impacts of nonconventional nitrogen removal technology, we compared the embodied energy and GHG emissions resulting from partial nitritation/anammox coupled to anaerobic secondary treatment. The resulting process train enabled a lower embodied energy but increased GHG emissions, largely due to emissions of N2O, a potent greenhouse gas.

SARS-CoV-2 RNA is enriched by orders of magnitude in primary settled solids relative to liquid wastewater at publicly owned treatment works.

Wastewater-based epidemiology has gained attention throughout the world for detection of SARS-CoV-2 RNA in wastewater to supplement clinical testing. Raw wastewater consists of small particles, or solids, suspended in liquid. Methods have been developed to measure SARS-CoV-2 RNA in the liquid and the solid fraction of wastewater, with some studies reporting higher concentrations in the solid fraction. To investigate this relationship further, six laboratories collaborated to conduct a study across five publicly owned treatment works (POTWs) where both primary settled solids obtained from primary clarifiers and raw wastewater influent samples were collected and quantified for SARS-CoV-2 RNA. Settled solids and influent samples were processed by participating laboratories using their respective methods and retrospectively paired based on date of collection. SARS-CoV-2 RNA concentrations, on a mass equivalent basis, were higher in settled solids than in influent by approximately three orders of magnitude. Concentrations in matched settled solids and influent were positively and significantly correlated at all five POTWs. RNA concentrations in both settled solids and influent were correlated to COVID-19 incidence rates in the sewersheds and thus representative of disease occurrence; the settled solids methods appeared to produce a comparable relationship between SARS-CoV-2 RNA concentration measurements and incidence rates across all POTWs. Settled solids and influent methods showed comparable sensitivity, N gene detection frequency, and calculated empirical incidence rate lower limits. Analysis of settled solids for SARS-CoV-2 RNA has the advantage of using less sample volume to achieve similar sensitivity to influent methods.

Microbes and Climate Change: a Research Prospectus for the Future.

Climate change is the most serious challenge facing humanity. Microbes produce and consume three major greenhouse gases-carbon dioxide, methane, and nitrous oxide-and some microbes cause human, animal, and plant diseases that can be exacerbated by climate change. Hence, microbial research is needed to help ameliorate the warming trajectory and cascading effects resulting from heat, drought, and severe storms. We present a brief summary of what is known about microbial responses to climate change in three major ecosystems: terrestrial, ocean, and urban. We also offer suggestions for new research directions to reduce microbial greenhouse gases and mitigate the pathogenic impacts of microbes. These include performing more controlled studies on the climate impact on microbial processes, system interdependencies, and responses to human interventions, using microbes and their carbon and nitrogen transformations for useful stable products, improving microbial process data for climate models, and taking the One Health approach to study microbes and climate change.

Temperate climate energy-positive anaerobic secondary treatment of domestic wastewater at pilot-scale.

Conventional aerobic secondary treatment of domestic wastewater is energy intensive. Here we report net energy positive operation of a pilot-scale anaerobic secondary treatment system in a temperate climate, with low levels of volatile solids for disposal (< 0.15 mgVSS/mgCODremoved) and hydraulic residence times as low as 5.3 h. This was accomplished with a second-generation staged anaerobic fluidized membrane bioreactor (SAF-MBR 2.0) consisting of a first-stage anaerobic fluidized bed reactor (AFBR) followed by a second-stage gas-sparged anaerobic membrane bioreactor (AnMBR). In stage 1, fluidized granular activated carbon (GAC) particles harbor methanogenic communities that convert soluble biodegradable COD into methane; in stage 2, submerged membranes produce system effluent (permeate) and retain particulate COD that can be hydrolyzed and/or recycled back to stage 1 for conversion to methane. An energy balance on SAF-MBR 2.0 (excluding energy from anaerobic digestion of primary suspended solids) indicated net energy positive operation (+ 0.11 kWh/m3), with energy recovery from produced methane (0.39 kWh electricity/m3 + 0.64 kWh heat/m3) exceeding energy consumption due to GAC fluidization (0.07 kWh electricity/m3) and gas sparging (0.20 kWh electricity/m3 at an optimal flux of 12.2 L/m2 h). Two factors dominated the operating expenses: energy requirements and recovery cleaning frequency; these factors were in turn affected by flux conditions, membrane fouling rate, and temperature. For optimization of expenses, the frequency of low-cost maintenance cleanings was adjusted to minimize recovery cleanings while maintaining optimal flux with low energy costs. An issue still to be resolved is the occurrence of ultrafine COD in membrane permeate that accounted for much of the total effluent COD.

Characterization of biodegradation of plastics in insect larvae.

Biodegradation of plastics has been observed at rapid turnover rate by some insect larvae, especially those of Coleoptera, in particular Tenebrionidae. Tenebrio molitor larva is well studied and capable of biodegrading polystyrene (PS), polyethylene (PE), polypropylene (PP), and polyvinyl chloride (PVC) in their digestive intestine in synergy with their gut microflora. This chapter includes the methods, protocols, and procedures used to characterize biodegradation of plastics in T. molitor larvae and their gut microbiomes with polystyrene as the model feedstock. The methods used can be expanded to enable investigation of other plastics and/or insects.

Robust Nitritation of Anaerobic Digester Centrate Using Dual Stressors and Timed Alkali Additions.

Nitrogen is commonly removed from wastewater by nitrification to nitrate followed by nitrate reduction to N2. Shortcut N removal saves energy by limiting ammonia oxidation to nitrite, but nitrite accumulation can be unstable. We hypothesized that repeated short-term exposures of ammonia-oxidizing communities to free ammonia (FA) and free nitrous acid (FNA) would stabilize nitritation by selecting against nitrite-oxidizing bacteria (NOB). Accordingly, we evaluated ammonium oxidation of anaerobic digester centrate in two bench-scale sequencing batch reactors (SBRs), seeded with the same inoculum and operated identically but with differing pH-control strategies. A single stressor SBR (SS/SBR) using pH set-point control produced HNO3, while a dual stressor SBR (DS/SBR) using timed alkalinity addition (TAA) produced HNO2 (ammonium removal efficiency of 97 ± 2%; nitrite accumulation ratio of 98 ± 1%). The TAA protocol was developed during an adaptation period with continuous pH monitoring. After adaptation, automated TAA enabled stable nitritation without set-point control. In the SS/SBR, repeatedly exposing the community to FA (8-10 h/exposure, one exposure/cycle) selected for FA-tolerant ammonia-oxidizing bacteria (Nitrosomonas sp. NM107) and NOB (Nitrobacter sp.). In the DS/SBR, repeatedly exposing the community to FA (2-4 h/exposure, three exposures/cycle) and FNA (4-6 h/exposure, two exposures/cycle) selected for FA- and FNA-resistant AOB (Nitrosomonas IWT514) and against NOB, stabilizing nitritation.

Enhanced Bioavailability and Microbial Biodegradation of Polystyrene in an Enrichment Derived from the Gut Microbiome of Tenebrio molitor (Mealworm Larvae).

As the global threat of plastic pollution has grown in scale and urgency, so have efforts to find sustainable and efficient solutions. Research conducted over the past few years has identified gut environments within insect larvae, including Tenebrio molitor (yellow mealworms), as microenvironments uniquely suited to rapid plastic biodegradation. However, there is currently limited understanding of how the insect host and its gut microbiome collaborate to create an environment conducive to plastic biodegradation. In this work, we provide evidence that T. molitor secretes one or more emulsifying factor(s) (30-100 kDa) that mediate plastic bioavailability. We also demonstrate that the insect gut microbiome secretes factor(s) (<30 kDa) that enhance respiration on polystyrene (PS). We apply these insights to culture PS-fed gut microbiome enrichments, with elevated rates of respiration and degradation compared to the unenriched gut microbiome. Within the enrichment, we identified eight unique gut microorganisms associated with PS biodegradation including Citrobacter freundii, Serratia marcescens, and Klebsiella aerogenes. Our results demonstrate that both the mealworm itself and its gut microbiome contribute to accelerated plastic biodegradation. This work provides new insights into insect-mediated mechanisms of plastic degradation and potential strategies for cultivation of plastic-degrading microorganisms in future investigations and scale-up.

In Vivo Polymerization ("Hard-Wiring") of Bioanodes Enables Rapid Start-Up and Order-of-Magnitude Higher Power Density in a Microbial Battery.

For microbial electrochemical technologies to be successful in the decentralized treatment of wastewater, steady-state power density must be improved and cost must be decreased. Here, we demonstrate in vivo polymerization ("hard-wiring") of a microbial community to a growing layer of conductive polypyrrole on a sponge bioanode of a microbial battery, showing rapid biocatalytic current development (∼10 times higher than a sponge control after 4 h). Moreover, bioanodes with the polymerized inoculant maintain higher steady-state power density (∼2 times greater than the control after 28 days). We then evaluate the same hard-wired bioanodes in both a two-chamber microbial fuel cell and microbial battery with a solid-state NaFeIIFeIII(CN)6 (Prussian Blue) cathode, showing approximately an order-of-magnitude greater volumetric power density with the microbial battery. The result is a rapid start-up, low-cost (no membrane or platinum catalyst), and high volumetric power density system (independent of atmospheric oxygen) for harvesting energy and carbon from dilute organics in wastewater.

Biodegradation of Polyvinyl Chloride (PVC) in Tenebrio molitor (Coleoptera: Tenebrionidae) larvae.

Tenebrio molitor larvae (Coleoptera: Tenebrionidae) are capable of depolymerizing and biodegrading polystyrene and polyethylene. We tested for biodegradation of Polyvinyl Chloride (PVC) in T. molitor larvae using rigid PVC microplastic powders (MPs) (70-150 µm) with weight-, number-, and size-average molecular weights (Mw, Mn and Mz) of 143,800, 82,200 and 244,900 Da, respectively, as sole diet at 25 °C. The ingestion rate was 36.62 ± 6.79 mg MPs 100 larvae-1 d-1 during a 16-day period. The egested frass contained about 34.6% of residual PVC polymer, and chlorinated organic carbons. Gel permeation chromatography (GPC) analysis indicated a decrease in the Mw, Mn and Mz by 33.4%, 32.8%, and 36.4%, respectively, demonstrating broad depolymerization. Biodegradation and oxidation of the PVC MPs was supported by the formation of OC and OC functional groups using frontier transform infrared spectroscopy (FTIR) and 1H nuclear magnetic resonance (1H NMR), and by significant changes in the thermal characteristics using thermo-gravimetric analysis (TGA). Chloride released was counted as about 2.9% of the PVC ingested, indicating limited mineralization of the PVC MPs. T. molitor larvae survived with PVC as sole diet at up to 80% over 5 weeks but did not complete their life cycle with a low survival rate of 39% in three months. With PVC plus co-diet wheat bran (1:5, w/w), they completed growth and pupation as same as bran only in 91 days. Suppression of gut microbes with the antibiotic gentamicin severely inhibited PVC depolymerization, indicating that the PVC depolymerization/biodegradation was gut microbe-dependent. Significant population shifts and clustering in the gut microbiome and unique OTUs were observed after PVC MPs consumption. The results indicated that T. molitor larvae are capable of performing broad depolymerization/biodegradation but limited mineralization of PVC MPs.

Biodegradation of low-density polyethylene and polystyrene in superworms, larvae of Zophobas atratus (Coleoptera: Tenebrionidae): Broad and limited extent depolymerization.

Larvae of Zophobas atratus (synonym as Z. morio, or Z. rugipes Kirsch, Coleoptera: Tenebrionidae) are capable of eating foams of expanded polystyrene (EPS) and low-density polyethylene (LDPE), similar to larvae of Tenebrio molitor. We evaluated biodegradation of EPS and LDPE in the larvae from Guangzhou, China (strain G) and Marion, Illinois, U.S. (strain M) at 25 °C. Within 33 days, strain G larvae ingested respective LDPE and PS foams as their sole diet with respective consumption rates of 58.7 ± 1.8 mg and 61.5 ± 1.6 mg 100 larvae-1d-1. Meanwhile, strain M required co-diet (bran or cabbage) with respective consumption rates of 57.1 ± 2.5 mg and 30.3 ± 7.7 mg 100 larvae-1 d-1. Fourier transform infrared spectroscopy, proton nuclear magnetic resonance, and thermal gravimetric analyses indicated oxidation and biodegradation of LDPE and EPS in the two strains. Gel permeation chromatography analysis revealed that strain G performed broad depolymerization of EPS, i.e., both weight-average molecular weight (Mw) and number-average molecular weight (Mn) of residual polymers decreased, while strain M performed limited extent depolymerization, i.e., Mw and Mn increased. However, both strains performed limited extent depolymerization of LDPE. After feeding antibiotic gentamicin, gut microbes were suppressed, and Mw and Mn of residual LDPE and EPS in frass were basically unchanged, implying a dependence on gut microbes for depolymerization/biodegradation. Our discoveries indicate that gut microbe-dependent LDPE and EPS biodegradation is present within Z. atratus in Tenebrionidae, but that the limited extent depolymerization pattern resulted in undigested polymers with high molecular weights in egested frass.

Nitrogen removal as nitrous oxide for energy recovery: Increased process stability and high nitrous yields at short hydraulic residence times.

The Coupled Aerobic-anoxic Nitrous Decomposition Operation (CANDO) is a two-stage process for nitrogen removal and resource recovery: in the first, ammonia is oxidized to nitrite in an aerobic bioreactor; in the second, oxidation of polyhydroxyalkanoate (PHA) drives reduction of nitrite to nitrous oxide (N2O) which is stripped for use as a biogas oxidant. Because ammonia oxidation is well-studied, tests of CANDO to date have focused on N2O production in anaerobic/anoxic sequencing batch reactors. In these reactors, nitrogen is provided as nitrite; PHA is produced from acetate or other dissolved COD, and PHA oxidation is coupled to N2O production from nitrite. In a pilot-scale study, N2O recovery was affected by COD/N ratio, total cycle time, and relative time periods for PHA synthesis and N2O production. In follow-up bench-scale studies, different reactor cycle times were used to investigate these operational parameters. Increasing COD/N ratio improved nitrite removal and increased biosolids concentration. Shortening the anaerobic phase prevented fermentation of PHA and improved its utilization. Efficient PHA synthesis and utilization in the anaerobic phase correlated with high N2O production in the anoxic phase. Shortening the anoxic phase prevented reduction of N2O to N2. By shortening both phases, total cycle time was reduced from 24 to 12 h. This optimized operation enabled increased biomass concentrations, increased N2O yields (from 71 to 87%), increased N loading rates (from 0.1 to 0.25 kg N/m3-d), and shorter hydraulic residence times (from 10 to 2 days). Long-term changes in operational performance for the different bioreactor systems tested were generally similar despite significant differences in microbial community structure. Long-term operation at short anaerobic phases selected for a glycogen-accumulating community dominated by a Defluviicoccus-related strain.

Fate of Hexabromocyclododecane (HBCD), A Common Flame Retardant, In Polystyrene-Degrading Mealworms: Elevated HBCD Levels in Egested Polymer but No Bioaccumulation.

As awareness of the ubiquity and magnitude of plastic pollution has increased, so has interest in the long term fate of plastics. To date, however, the fate of potentially toxic plastic additives has received comparatively little attention. In this study, we investigated the fate of the flame retardant hexabromocyclododecane (HBCD) in polystyrene (PS)-degrading mealworms and in mealworm-fed shrimp. Most of the commercial HBCD consumed by the mealworms was egested in frass within 24 h (1-log removal) with nearly a 3-log removal after 48 h. In mealworms fed PS containing high HBCD levels, only 0.27 ± 0.10%, of the ingested HBCD remained in the mealworm body tissue. This value did not increase over the course of the experiment, indicating little or no bioaccumulation. Additionally, no evidence of higher trophic level bioaccumulation or toxicity was observed when L. vannamei (Pacific whiteleg shrimp) were fed mealworm biomass grown with PS containing HBCD. Differences in shrimp survival were attributable to the fraction of mealworm biomass incorporated into the diet, not HBCD. We conclude that the environmental effects of PS ingestion need further evaluation as the generation of smaller, more contaminated particles is possible, and may contribute to toxicity at nanoscale.

Community members in activated sludge as determined by molecular probe technology.

The use of molecular probe technology is demonstrated for routine identification and tracking of cultured and uncultured microorganisms in an activated sludge bioreactor treating domestic wastewater. A key advantage of molecular probe technology is that it can interrogate hundreds of microbial species of interest in a single measurement. In environmental niches where a single genus (such as Competibacteraceae) dominates, it can be difficult and expensive to identify microorganisms that are present at low relative abundance. With molecular probe technology, it is straightforward. Members of the Competibacteraceae family, none of which have been grown in pure culture, are abundant in an activated sludge system in the San Francisco Bay Area, California, USA. Molecular probe ensembles with and without Competibacteraceae probes were constructed. Whereas the probe ensemble with Competibacteraceae probes identified a total of ten bacteria, the molecular probe ensemble without Competibacteraceae probes identified 29 bacteria, including many at low relative abundance and including some species of public health significance.

Author Correction: Global diversity and biogeography of bacterial communities in wastewater treatment plants.

An amendment to this paper has been published and can be accessed via a link at the top of the paper.